Hello,
This may be useful:
Integrated Genome Browser (the "display in IGB" link) has gene models for
IRG4.0 in BED format:
http://www.igbquickload.org/quickload/O_sativa_japonica_Jun_2009/O_sativa_japonica_Jun_2009.bed.gz
The original data were taken from Phytozome.net and reformatted to BED.
Best wishes,
Ann
---
Ann Loraine, Ph.D.
Associate Professor
Department of Bioinformatics and Genomics
University of North Carolina at Charlotte
North Carolina Research Campus
600 Laureate Way
Kannapolis, NC 28081
704-250-5750
alora...@uncc.edu
http://www.transvar.org
http://www.bioviz.org
http://www.uncc.edu
From: maheshi dassanayake
mailto:maheshi.dassanay...@gmail.com>>
Date: Mon, 10 Dec 2012 12:45:37 -0500
To: mailto:galaxy-user@lists.bx.psu.edu>>
Subject: [galaxy-user] Downloading the gene coordinates of the rice genome
Dear Galaxy users,
Does anyone know how I can download the gene coordinates for the genome build:
oryza_sativa_japonica_nipponbare_IRGSP4.0.
Thanks a lot for your help.
maheshi
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