Re: [galaxy-user] Filter Pileup in SAM tools

2013-03-04 Thread Anton Nekrutenko
Andy: This is an issue we are aware of. To workaround is: - click on a pencil icon within the pileup dat set you nee to filter - middle pane on the interface will change - click on "datatype" tab - select "pileup" in "New datatype" - click save Filter pileup will now recognize you dataset. Than

[galaxy-user] Filter Pileup in SAM tools

2013-02-22 Thread Andrew South
NGS: SAM Tools I have generated a simple 6 column pileup from my BAM file but when I try to use the Filter Pileup tool it doesn't recognise my pileup file, I receive the message "History does not include a dataset of the required format / build". Build is hg19. Curiously in the same history I h