? Has
anybody experienced/resolved this before?
Thanks,
Raj.
From: Carlos Borroto [mailto:carlos.borr...@gmail.com]
Sent: Thursday, December 08, 2011 7:43 PM
To: Praveen Raj Somarajan
Cc: galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Genomic interval file for GATK
Hi Raj,
I've
Hi Raj,
I've been also testing GATK Beta pipeline on Galaxy. This is the workflow I
have so far:
http://test.g2.bx.psu.edu/u/cjav/w/gatk
There are a few error coming up that I haven't had the time to fix or work
around yet, but I think it could be a good starting point. For example an
issue with
All,
I'm using a locally installed galaxy with GATK 1.3 beta (recently updated). I
would be interested in variant calling using GATK on both Illumina and SOLiD
data. My questions are:
1) What should be the format that "Genomic Interval" option can accept in beta
version. It produced an error
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