[galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Eduardo Fox
Hello, Please I would like to know if it would be normal of a job to be queued for several days? It is a SAM to BAM conversion, and it has been waiting for over 5 days to run. I understand that the SAM file is pretty large but other similar conversions I made on the server recently were done

Re: [galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Eduardo Fox
2014-03-31 11:29 GMT+02:00 Eduardo Fox ofoxo...@gmail.com: Hello, Please I would like to know if it would be normal of a job to be queued for several days? It is a SAM to BAM conversion, and it has been waiting for over 5 days to run. I understand that the SAM file is pretty large but other

Re: [galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Nate Coraor
Hi Eduardo, I believe the job in question is not running because one of its inputs (#101) failed to have metadata set properly. This situation can be fixed by using the 'auto-detect' button on the failed dataset. --nate On Mon, Mar 31, 2014 at 5:20 PM, Eduardo Fox ofoxo...@gmail.com wrote: