Re: [galaxy-user] Mapping miRNA data

2013-01-29 Thread Jennifer Jackson
Hello Mark, The public Main Galaxy instance has been very busy for the last week or so. The best strategy is to start the jobs that are the most important first, to leave these queued, and to not stop/restart jobs. These will eventually run in the order they were submitted with respect to othe

[galaxy-user] Mapping miRNA data

2013-01-29 Thread Mark Lindsay
Dear All I am interested in using Galaxy to compare miRNA sequencing data. I have previously groomed, clipped and then mapped miRNA data onto hg19 using bowtie. I have then identified differentially expressed miRNAs using cuffdiff and the UCSC downloaded miRNA/snoRNA database. However, I have