Re: [galaxy-user] Problem with BWA?

2013-01-22 Thread Jennifer Jackson

Hi Mike,

The public Main Galaxy instance has been very busy for the last week or 
so, and wait times for NGS jobs have been a bit longer than usual.


The important part is to leave jobs in the waiting-to-run "grey" state 
and not stop/restart or they will effectively be moved back to the end 
of the wait queue. In any case, by now your jobs should have run, but I 
wanted to post a reply, for others who may be currently waiting for jobs 
to run. Best advice -> leave jobs in queue.


As always, local or cloud instances are alternatives for those with time 
constraints:

http://getgalaxy.org
http://usegalaxy.org/cloud

Best,

Jen
Galaxy team

On 1/19/13 5:39 AM, Mike Dufault wrote:

To whom it may concern:
I have noticed that my workflow has been stuck on "align with BWA for
illumina" for ~24hrs. Is there a problem?
Thanks,
Mike



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--
Jennifer Hillman-Jackson
Galaxy Support and Training
http://galaxyproject.org
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[galaxy-user] Problem with BWA?

2013-01-19 Thread Mike Dufault
To whom it may concern:
 
I have noticed that my workflow has been stuck on "align with BWA for illumina" 
for ~24hrs. Is there a problem?
 
Thanks,
Mike___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

  http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

  http://lists.bx.psu.edu/