[galaxy-user] Problem with executable file in FastQC

Hi mates!! I have a problem with Galaxy... FastQC doesn't run because the file FastQC.py cann't find executable file FastQC.xml. Almost, that file is in the same directory called rgenetics, (seeing Linux terminal) . someone can help me? thanks and have a nice day :)

Re: [galaxy-user] Problem with executable file in FastQC

Hi, Jorge, Galaxy source includes the Galaxy interfaces but not the third party executables for tools like fastqc or bwa. They can be automagically installed if you install the tool from a tool shed but at a guess, you are working on your desktop with the fastqc tool in a recent clone of galaxy?

Re: [galaxy-user] Problem with executable file in FastQC

thanks for the information Ross but I'm lost with the guide for the fastqc tool. I don't understand how to resolve missing tool dependecies Date: Mon, 9 Dec 2013 22:30:58 +1100 Subject: Re: [galaxy-user] Problem with executable file in FastQC From: ross.laza...@gmail.com To: braun_

Re: [galaxy-user] Problem with executable file in FastQC

+1100 Subject: Re: [galaxy-user] Problem with executable file in FastQC From: ross.laza...@gmail.com To: braun_...@hotmail.com CC: galaxy-user@lists.bx.psu.edu Hi, Jorge, Galaxy source includes the Galaxy interfaces but not the third party executables for tools like fastqc or bwa. They can