Re: [galaxy-user] SNP calling problems (Jennifer Jackson)

2013-10-01 Thread garzetti
can I do that? Thank you very much! Debora Message: 3 Date: Fri, 27 Sep 2013 14:02:50 -0700 From: Jennifer Jackson j...@bx.psu.edu To: garzetti garze...@mvp.uni-muenchen.de Cc: galaxy-u...@bx.psu.edu Subject: Re: [galaxy-user] SNP calling problems Message-ID: 5245f27a.7020...@bx.psu.edu Content

[galaxy-user] SNP calling problems

2013-09-26 Thread garzetti
Dear all, I have been looking for an answer to my problem in all the Galaxy Support resources but with no success. I am sorry if this topic has been already discussed! So, I am analyzing MiSeq data on the main Galaxy. I have Fastq files from 4 paired-end samples. After having checked the

[galaxy-user] SNP Calling

2012-10-17 Thread Francesco Vitiello
Does anyone knows a step-by-step pipeline to SNP calling on illumina dataset? From the alignment to the end thanks Francesco -- ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the