Hi Debora,
This option was introduced in a version of GATK that is newer than the
one on the public Main Galaxy server under the tool group "NGS: GATK
Tools (beta)". The version of tools running here is "GATK (1.4)"
This is noted here for reference and in the tool output:
http://wiki.galaxypr
can I do that?
Thank you very much!
Debora
Message: 3
Date: Fri, 27 Sep 2013 14:02:50 -0700
From: Jennifer Jackson
To: garzetti
Cc: galaxy-u...@bx.psu.edu
Subject: Re: [galaxy-user] SNP calling problems
Message-ID: <5245f27a.7020...@bx.psu.edu>
Content-Type: text/plain; charset="
Hi Debora,
Sorry to hear that you are having problems. We can help get you going
again! Please see below:
On 9/26/13 7:20 AM, garzetti wrote:
Dear all,
I have been looking for an answer to my problem in all the Galaxy
Support resources but with no success. I am sorry if this topic has
been
Dear all,
I have been looking for an answer to my problem in all the Galaxy
Support resources but with no success. I am sorry if this topic has been
already discussed!
So, I am analyzing MiSeq data on the main Galaxy.
I have Fastq files from 4 paired-end samples. After having checked the
qua
4 matches
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