Re: [galaxy-user] Trackster error: indexing

2012-07-14 Thread Jeremy Goecks
Hi Nancy, I'm ccing the galaxy-user mailing list as this discussion may be helpful to others. The problem is that your BAM dataset isn't sorted. Galaxy requires that uploaded BAMs be sorted to be useful for most tools and for visualization. You can fix this in two ways: (a) using samtools

Re: [galaxy-user] Trackster error: indexing

2012-07-13 Thread Jeremy Goecks
Hi Nancy, Can you share the history with the problematic dataset(s) with me and I can take a look? Please share the history with me using my email address: jeremy.goe...@emory.edu Best, J. On Jul 12, 2012, at 9:07 PM, Nancy Au Yeung wrote: Hi, I saw another post regarding trackster error

[galaxy-user] Trackster error: indexing

2012-07-12 Thread Nancy Au Yeung
Hi, I saw another post regarding trackster error and it seems like this is different. I have tried copying the dataset from the History option, but this same error occurs. See error script below. Thanks! Trackster Error *** glibc detected *** python: double free or corruption (top):