[galaxy-user] display at ucsc error

2013-09-12 Thread lilach noy
Hey there, I am trying to add a custom track of a bed file through Galaxy and i keep getting this error: - Error line 325149 of https://main.g2.bx.psu.edu/root/display_as?id=11632524display_app=ucscauthz_method=display_at: chrM_rCRS not a recognized sequence (note: sequence names are

Re: [galaxy-user] display at ucsc error

2013-09-12 Thread Hiram Clawson
Please note, this sequence chrM_rCRS does not exist in the human/hg19 genome browser at UCSC. It is not a recognized sequence. There is a note about this on the gateway page: http://genome.ucsc.edu/cgi-bin/hgGateway?db=hg19 See the paragraph titled: Note on chrM --Hiram On 9/12/13 1:25 AM,