Re: [galaxy-user] exome-capture sequencing analysis tools?

Hi Yan, I know that you have already start this analysis with one method, as posted here: http://gmod.827538.n3.nabble.com/How-to-extract-geneID-from-pileup-file-tp4036039.html But I wanted to follow-up and let you know that there are actually many ways to go about doing this in Galaxy. Which

[galaxy-user] exome-capture sequencing analysis tools?

Hi Jen and other Galaxy-users, I am working on exome-capture sequencing with NGS. I am wondering if there is a tool to identify SNPs on Galaxy? I would like to get SNP information (position and allele frequency ) for each gene. Any information is highly appreciated! Thanks! Best wishes,