Hi Perumal,
There isn't a simple fasta extraction tool on the public Main Galaxy
server, but the extraction is possible and could be grouped into a
workflow for re-use once completed. This is simpler that it first looks,
really just 4 steps:
1. Convert the fasta file to tabular:
'FASTA
On Fri, Nov 30, 2012 at 3:55 PM, Perumal Vijayan wrote:
> I have successfully uploaded a large fasta file (2.5 million genomic
> sequence contigs) onto Galaxy server. I wish to extract a subset of
> sequences from this file. I have a list of the fasta headers. Is there a
> way I can accomplish
I have successfully uploaded a large fasta file (2.5 million genomic
sequence contigs) onto Galaxy server. I wish to extract a subset of
sequences from this file. I have a list of the fasta headers. Is there a
way I can accomplish this on Galaxy?
--
Perumal Vijayan
Saskatoon
Canada
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