subject:"\[galaxy\-user\] mm9 reference GTF file for Cuffcompare"

Re: [galaxy-user] mm9 reference GTF file for Cuffcompare (shamsher jagat)

2011-09-27 Thread Lozach, Jean

-- Message: 4 Date: Mon, 26 Sep 2011 16:13:54 -0700 From: shamsher jagat kanwar...@gmail.com To: galaxy-user galaxy-user@lists.bx.psu.edu Subject: [galaxy-user] mm9 reference GTF file for Cuffcompare Message-ID: CAN_Q6i72ALsjHKgbQNRFo=ktywab24bwatjsee-1npa3z64

[galaxy-user] mm9 reference GTF file for Cuffcompare

2011-09-26 Thread shamsher jagat

I wonder if some has mouse genome GTF file compatible with Tophat/ Cuffcompare. The contig names on Ensembel and that of Tophat GTF file are not same. Thanks ___ The Galaxy User list should be used for the discussion of Galaxy analysis and