[galaxy-user] samtools output

2011-07-08 Thread Alison Gardner
Hello, I am having trouble replicating the great output you get after running samtools Filter pileup on coverage snps with ten columns (with consensus) when I try to run samtools locally on my computer. Unfortunately we are unable to use Galaxy with our new data as our files are too large to

Re: [galaxy-user] samtools output

2011-07-08 Thread Kanwei Li
As an alternative, you can easily install Galaxy on your own computer to negate the upload time.. it's very easy if you have a *nix system: https://bitbucket.org/galaxy/galaxy-central/wiki/GetGalaxy -K On Thu, Jul 7, 2011 at 11:12 PM, Alison Gardner alison.gard...@adelaide.edu.au wrote: Hello,