Re: [galaxy-user] BedGraph format

2011-08-09 Thread James Robinson
, August 05, 2011 10:16 PM To: 吳正華 Cc: galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] BedGraph format Hello John, A file in bedgraph format should display at UCSC. I think that #3 (below) is your concern, but there are a few things to check if the display at UCSC link is not showing

Re: [galaxy-user] BedGraph format

2011-08-09 Thread John Wu
...@broadinstitute.org] Sent: Wednesday, August 10, 2011 11:57 AM To: John Wu Cc: galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] BedGraph format Hi, I think you need to include a track line and specify bedgraph, like this track type=bedGraph Is that maybe the problem? It sounds like UCSC is treating

Re: [galaxy-user] BedGraph format

2011-08-05 Thread Jennifer Jackson
Hello John, A file in bedgraph format should display at UCSC. I think that #3 (below) is your concern, but there are a few things to check if the display at UCSC link is not showing up for the dataset: 1. File is tab delimited (not space or other) and four columns, such as (from the UCSC