Re: [galaxy-user] Can Galaxy help with Comparative Genomics?

2013-04-30 Thread Joshua Burkhart
Jen, I'd like to compare the variation between genomes and will get back to you after reviewing the resources you suggested. Thanks! Joshua Burkhart On 04/28/2013 07:51 PM, Jennifer Jackson wrote: Hi Joshua, Do you want to compare the entire genome or just the

Re: [galaxy-user] Can Galaxy help with Comparative Genomics?

2013-04-28 Thread Jennifer Jackson
Hi Joshua, Do you want to compare the entire genome or just the transcriptome/exome/variation between the two assembled genomes? Or maybe explore both, using the combined evidence to strengthen any conclusions? These publications are a good overview of the tools/methods available in