Re: [galaxy-user] Extract data and new genes

2012-05-18 Thread Luciano Cosme
Thanks Jeremy, I will do it before try the *de novo *assembly. Luciano On Fri, May 18, 2012 at 1:44 PM, Jeremy Goecks wrote: > I find a lot of potential new genes (hundreds or thousands of reads > aligning to regions where there is no gene annotation), > > > This shouldn't be completely unexp

Re: [galaxy-user] Extract data and new genes

2012-05-18 Thread Jeremy Goecks
> I find a lot of potential new genes (hundreds or thousands of reads aligning > to regions where there is no gene annotation), This shouldn't be completely unexpected. High-coverage RNA-seq data is constantly revealing new exons/splicing/transcripts, even in well-annotated genomes. > I also f