Hello Jiwen,
For the FTP operation, please see the instructions in this wiki and
screencast. There are no known issues, so double checking the steps is a
good place to start with troubleshooting the process:
http://wiki.g2.bx.psu.edu/Learn/Upload%20via%20FTP
For Biomart, certain fields have HTML content. Galaxy does not permit
these to be transferred. The solution is to uncheck these boxes in the
Biomart form (where the fields of the output file are selected) and send
over the remaining data. It can take some experimentation to locate the
exact fields with the HTML content sometimes, but these tend to be the
description text fields, so I would start with omitting those first and
see if the problem clears up.
Best,
Jen
Galaxy team
On 2/1/12 2:34 AM, 杨继文 wrote:
Hi All,
Today I have problem to use FTP to upload data to Galaxy. I used
Filezilla software and the server name "main.g2.bx.psu.edu", but I can
not connect to the server. Something wrong with my operation?
Also, when I tried to get data from Biomart to Galaxy, I got the error
warning "the uploaded file contains unappropriate HTML links "
Hope you can tell me if I did something wrong.
Thanks
Jiwen
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--
Jennifer Jackson
http://usegalaxy.org
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___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
