Re: [galaxy-user] Galaxy and Ion Torrent

2011-09-28 Thread Anton Nekrutenko
Also, test instance (http://test.g2.bx.psu.edu) has TMap mapper, which was recently rolled out for testing. The wrapper was contributed by Nils Homer. At this time there are only E. coli indices, but more can be added. a. Anton Nekrutenko http://galaxyproject.org On Sep 28, 2011, at 10:18

Re: [galaxy-user] Galaxy and Ion Torrent

2011-09-28 Thread Peter Cock
2011/9/28 cuentasecuenciacion : > Hello!! > > Does anybody know whether Ion Torrent data is supported by Galaxy? > > Thank you!! IonTorrent data acts a lot like Roche 454, it even comes as SFF files (or FASTQ). So in principle anything Galaxy supports for 454 would be worth trying with IonTorrent