On Thu, Aug 2, 2012 at 7:50 PM, D. A. Cowart <dac...@psu.edu> wrote: > Hello, > > > I am attempting to use Galaxy to calculate the mean sequence read length and > identify the range of read lengths for my 454 data. The data has already > been organized and sorted by species. The format of the data is as follows: >
That was probably FASTA format (but mangled in the email). > I have attempted to use the "Summary Statistics" button, however it appears > to only be for numerical data and not sequence data. Is this tool/task > available via Galaxy? Use the "Compute sequence length" tool to compute the read lengths, and then you should be able to compute some statistics about the lengths. Peter ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
