Re: [galaxy-user] Illumina Methylation tool in toolshed

2013-07-29 Thread Bjoern Gruening
Hi Sachit, not in the toolshed but you can find a start here: https://github.com/bgruening/galaxytools/tree/master/illumina_methylation_analyser its for the 450k chips, I have also some tools for WGMA if you are interested. Cheers, Bjoern Hi, This is my third post regarding this matter

Re: [galaxy-user] Illumina Methylation tool in toolshed

2013-07-29 Thread Sachit Adhikari
Hi Bjoern, Thank you for your reply. To be precise I am looking for a wrapper of * lumi. *http://www.bioconductor.org/packages/2.12/bioc/html/lumi.html Do we have that in main tool shed or test tool shed or in github? Thanks, Sachit On Mon, Jul 29, 2013 at 2:53 PM, Bjoern Gruening

Re: [galaxy-user] Illumina Methylation tool in toolshed

2013-07-29 Thread Bjoern Gruening
Not that I know of, mine is wrapping IMA. cheers, Bjoern Hi Bjoern, Thank you for your reply. To be precise I am looking for a wrapper of * lumi. *http://www.bioconductor.org/packages/2.12/bioc/html/lumi.html Do we have that in main tool shed or test tool shed or in github?