Hello Lizex,
The utility tools from Tophat are not included with Galaxy, so that is
perhaps why you are having trouble creating junctions files, but I am
wondering if you need them at all.
You mention that you have different sequence types from different
samples. These represent different co
Dear all
I have in my project single end reads (50 bp) for some samples and paired end
reads (100 bp frw and rev) for the other samples. I had to re-sequence some of
the samples of which I have paired-end reads. However the re-sequence data I
receives is single-end reads of 250 bp. Tophat wont
On Feb 15, 2013, at 10:35 AM, Mike Dufault wrote:
> To whom it may concern:
>
> The History panel on the right side of the Galaxy page is taking a very very
> long time to load. Also, when it does load, I have tired to save my .bam
> files and the transmissions gets truncated to ~7000kb - 8000
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