Hi Bryn,
Removing unneeded data is the best solution if using Main. One example
would be saving back (locally) the original FASTQ input, then deleting
it permanently from your history, rather than leaving both the raw data
and the Groomed data on the server. This can actually help quite a bit
if your datasets are large. See this wiki for help about Delete vs
Delete Permanently:
http://galaxyproject.org/wiki/Learn/Managing%20Datasets#Actions
Another option is to move to a local or cloud instance:
http://getgalaxy.org
I am posting back to the mailing list along with a clearer subject line,
to help others who may have a similar question.
Best,
Jen
Galaxy team
On 10/25/11 10:54 AM, Bryn Gaertner wrote:
Hi Jennifer,
I am trying to run cufflinks, which I don't
think should be too hard (it's on C. elegans). Do you have any
suggestions for reducing the amount of memory I'm sucking?
Thanks!
Bryn
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/wiki/Support
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
