Hi Kanwar,
This appears to be related to your latter question, but if not, please
let us know. The "Make window" tool is a good choice for breaking up
intervals and a tools such as "Line/Word/Character count" and "Compute"
in the Text Manipulation group can compute some simple statistics on
datasets and lines of data. The tool "Join, Subtract and Group -> Group"
may also be helpful.
Best,
Jen
Galaxy team
On 12/7/12 10:54 AM, shamsher jagat wrote:
I have a bacterial genome which I divided into bins of 5 bp and
counted reads in each bin. Now I want to use a sliding window of say
100 bp and count the average. Is there any option in Galaxy that I can
do it I have bed file of data.
Thanks
Kanwar
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___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
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use the Galaxy Development list:
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