Hi Lee,
There are a few options .. my guess is you are working with files like
snpXXXCodingDbSnp?
1 - Using an expression such as this one will extract individual
characters from the column, including the commas (treating the column's
data like a string)
c5.pop(1)
= extracts the
@lists.bx.psu.edu galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Text Manipulation Compute
c1[1:c1.find(()] fails
Message-ID: 4e5282c4.3090...@bx.psu.edu
Content-Type: text/plain; charset=windows-1252; format=flowed
Hello Curtis,
There is some more feedback from our developers. In your own
Hello Robert,
This tool does sanitize many of the characters required to build this
type of regular expression. Some changes to a few of the Text
Manipulation tools have been discussed, but nothing is planned for the
near term.
For now, the most expedient solution is for you to download the
On Fri, May 6, 2011 at 3:16 PM, Roman Valls brainst...@nopcode.org wrote:
Well, having similarly basic tools (in Galaxy) that can be performed on
the commandline, such as sort or cut I just wondered how come a
uniq is not there on the tool panel in some form/name.
Thanks for the feedback Rory
Hi Peter and Roman,
The Count tool under Statistics section provides uniq-like
functionality. If you run this tool by selecting all columns under Count
occurrences of values in column(s) field, your output will contain one line
per record, with the 1st column containing the number of occurrences
Hi Peter,
sounds nice, would be a great feature. For everyone else how is not using
a custom server: if you are lucky you can use the trim tool on tabs to
solve your problem.
If you want to add text to the beginning or end of a column:
- Use add column and add the text as a new column
- Then use
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