Hi Rich,
Are you using a local instance or the main public instance at
http://usegalaxy.org?
There was a bug fix to this tool on the public instance right around the
time this error was reported. Please try the job again. If it fails, it
may be that the files are too large, although an error would be expected.
If after the re-run, the same thing occurs, please share a link to the
history and we can take a look. Use "Options -> Share or Publish",
generate the link, and send directly to me (not the list).
Best,
Jen
Galaxy team
On 9/30/11 9:43 AM, Richard Mark White wrote:
Hi,
I mapped two illumina runs using TopHat (they are from same RNA sample).
Then tried to use the BAM merge tool to make this into one BAM file for
further processes. But it returned an empty file. Is this not possible?
Maybe I am not understanding the purpose/use of BAM merge?
Rich
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--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
