[gentoo-commits] proj/sci:master commit in: licenses/, sci-biology/snapgene-viewer/
commit: 20e1ca43113e263d17ce391deae303ef5d94ec44
Author: Pacho Ramos gentoo org>
AuthorDate: Fri Nov 10 16:44:51 2023 +
Commit: Pacho Ramos gentoo org>
CommitDate: Fri Nov 10 16:45:34 2023 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=20e1ca43
sci-biology/snapgene-viewer: New package
Signed-off-by: Pacho Ramos gentoo.org>
licenses/GSL | 221 +
sci-biology/snapgene-viewer/metadata.xml | 12 ++
.../snapgene-viewer/snapgene-viewer-7.0.3.ebuild | 65 ++
3 files changed, 298 insertions(+)
diff --git a/licenses/GSL b/licenses/GSL
new file mode 100644
index 0..38014b153
--- /dev/null
+++ b/licenses/GSL
@@ -0,0 +1,221 @@
+ END USER LICENSE AGREEMENT
+
+ NOTICE: THIS SOFTWARE END USER LICENSE AGREEMENT ("EULA") IS A LEGAL
+ AGREEMENT BETWEEN YOU (EITHER AS AN INDIVIDUAL OR AN ENTITY) AND GSL
+ BIOTECH LLC ("GSL"). PLEASE READ IT CAREFULLY BEFORE COMPLETING THE
+ INSTALLATION PROCESS AND USING THE SOFTWARE. THIS AGREEMENT PROVIDES A
+ LICENSE TO USE THE SOFTWARE AND CONTAINS WARRANTY INFORMATION AND
+ LIABILITY DISCLAIMERS. BY INSTALLING AND USING THE SOFTWARE, YOU ARE
+ CONFIRMING YOUR ACCEPTANCE OF THE SOFTWARE AND AGREEING TO BECOME BOUND BY
+ THE TERMS OF THIS AGREEMENT. IF YOU DO NOT AGREE TO BE BOUND BY THESE
+ TERMS, THEN DO NOT INSTALL THE SOFTWARE, AND RETURN THE SOFTWARE TO GSL.
+
+1. Recitals
+
+ 1. This End User License Agreement ("EULA") is a legal agreement
+between you (either an individual person or a single legal
+entity, who will be referred to in this EULA as "End User", and
+GSL Biotech LLC ("GSL") for the SnapGene software product
+("Software") or SnapGene Viewer software product ("Freeware")
+that accompanies this EULA, including any associated media,
+printed materials and electronic documentation.
+ 2. The Software or Freeware also includes any software updates,
+add-on components, web services and/or supplements that GSL may
+provide to End User or make available to End User after the date
+End User obtains the initial copy of the Software or Freeware, to
+the extent that such items are not accompanied by a separate
+license agreement or terms of use. By installing, copying,
+downloading, accessing or otherwise using the Software or
+Freeware, End User agrees to be bound by the terms of this EULA.
+If End User does not agree to the terms of this EULA, End User
+should not install, access or use the Software or Freeware.
+
+2. License Grants
+
+ 1. Freeware License. GSL grants End User an unlimited license to use
+the Freeware. The install packages for the Freeware can be
+redistributed without restriction, and can be used for both
+commercial and non-commercial purposes.
+ 2. Trial Period License. End User may download and use the Software
+for free for thirty (30) days after installation ("Trial
+Period"). During the Trial Period, GSL grants End User a limited,
+non-exclusive, non-transferable, non-renewable license to copy
+and use the Software for evaluation purposes only. At GSL's
+discretion, GSL may provide limited support through email or
+discussion forums at GSL's website. The evaluation copy of the
+Software contains a feature that will automatically disable
+certain features of the Software at the end of Trial Period. GSL
+will have no liability to End User if this feature disables the
+Software.
+ 3. License After Trial Period. This Software is licensed, not sold.
+End User has the option of paying a license fee in order to use
+the Software after the expiration of the Trial Period. Upon
+payment of the license fee, GSL provides End User with a
+registration number, and grants End User a limited,
+non-exclusive, non-transferable license as outlined in Sections
+2.d through Section 2.g and in Section 3.
+ 4. Computer-Specific License. Under the terms of a Computer-Specific
+License for the Software, End User may activate each license only
+on a single computer, and may use the Software only on that
+computer. The Software may not be accessed remotely.
+ 5. Floating License. Under the terms of a Floating License for the
+Software, End User may install the Software on an unlimited
+number of computers. All computers using the Software must have
+the ability to communicate with a license server. The number of
+users who may run the Software concurrently must not at any time
+
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 3e103d61fbead2f6cfc07fed707633100c60a0fc Author: Andrew Ammerlaan gentoo org> AuthorDate: Tue May 2 12:36:00 2023 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Tue May 2 12:36:00 2023 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=3e103d61 licenses: cleanup old licenses Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/CeCILL-1.1 | 513 licenses/PGI| 262 --- licenses/ligplot+ | 138 -- licenses/polyphen | 7 - licenses/signalp| 218 -- licenses/tmhmm | 217 -- 6 files changed, 1355 deletions(-) diff --git a/licenses/CeCILL-1.1 b/licenses/CeCILL-1.1 deleted file mode 100644 index b4efe1181..0 --- a/licenses/CeCILL-1.1 +++ /dev/null @@ -1,513 +0,0 @@ -FREE SOFTWARE LICENSING AGREEMENT CeCILL - - - -Notice --- - - -This Agreement is a free software license that is the result of discussions -between its authors in order to ensure compliance with the two main -principles guiding its drafting: - - firstly, its conformity with French law, both as regards the law of - torts and intellectual property law, and the protection that it offers - to authors and the holders of economic rights over software. - - secondly, compliance with the principles for the distribution of free - software: access to source codes, extended user-rights. - -The following bodies are the authors of this license CeCILL (Ce : CEA, C : -CNRS, I : INRIA, LL : Logiciel Libre): - -Commissariat � l'Energie Atomique - CEA, a public scientific, technical and -industrial establishment, having its principal place of business at 31-33 -rue de la F�d�ration, 75752 PARIS cedex 15, France. - -Centre National de la Recherche Scientifique - CNRS, a public scientific -and technological establishment, having its principal place of business at -3 rue Michel-Ange 75794 Paris cedex 16, France. - -Institut National de Recherche en Informatique et en Automatique - INRIA, a -public scientific and technological establishment, having its principal -place of business at Domaine de Voluceau, Rocquencourt, BP 105, 78153 Le -Chesnay cedex. - - -PREAMBLE - - - -The purpose of this Free Software Licensing Agreement is to grant users the -right to modify and redistribute the software governed by this license -within the framework of an "open source" distribution model. - -The exercising of these rights is conditional upon certain obligations for -users so as to ensure that this status is retained for subsequent -redistribution operations. - -As a counterpart to the access to the source code and rights to copy, modify -and redistribute granted by the license, users are provided only with a -limited warranty and the software's author, the holder of the economic -rights, and the successive licensors only have limited liability. - -In this respect, it is brought to the user's attention that the risks -associated with loading, using, modifying and/or developing or reproducing -the software by the user given its nature of Free Software, that may -mean that it is complicated to manipulate, and that also therefore means -that it is reserved for developers and experienced professionals having -in-depth computer knowledge. Users are therefore encouraged to load and test -the Software's suitability as regards their requirements in conditions -enabling the security of their systems and/or data to be ensured and, more -generally, to use and operate it in the same conditions of security. -This Agreement may be freely reproduced and published, provided it is -not altered, and that no Articles are either added or removed herefrom. - -This Agreement may apply to any or all software for which the holder of the -economic rights decides to submit the operation thereof to its provisions. - - -Article 1 - DEFINITIONS - - - -For the purposes of this Agreement, when the following expressions commence -with a capital letter, they shall have the following meaning: - -Agreement: means this Licensing Agreement, and any or all of its subsequent -versions. - -Software: means the software in its Object Code and/or Source Code form -and, where applicable, its documentation, "as is" at the time when the -Licensee accepts the Agreement. - -Initial Software: means the Software in its Source Code and/or Object Code -form and, where applicable, its documentation, "as is" at the time when it -is distributed for the first time under the terms and conditions of the -Agreement. - -Modified Software: means the Software modified by at least one -Contribution. - -Source Code: means all the Software's instructions and program lines to -which
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 07e54449119b3f23130585e216a0572100bcf05a Author: Andrew Ammerlaan gentoo org> AuthorDate: Thu Dec 1 22:08:25 2022 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Thu Dec 1 22:08:25 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=07e54449 licenses: cleanup Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/estscan| 88 - licenses/mRNAmarkup | 25 --- 2 files changed, 113 deletions(-) diff --git a/licenses/estscan b/licenses/estscan deleted file mode 100644 index 46089aab6..0 --- a/licenses/estscan +++ /dev/null @@ -1,88 +0,0 @@ - ESTScan license - --- - -Copyright (c) Swiss Institute of Bioinformatics, Ludwig Institute for -Cancer Research (LICR), and Swiss Institute for Experimental Cancer -Research (ISREC), 1999, 2004. For the purposes of this copyright, the -Swiss Institute of Bioinformatics acts on behalf of its partners, LICR -and ISREC. - -The ESTScan software is the exclusive property of the copyright -owners, at UNIL - BEP, CH-1015 LAUSANNE, Switzerland. The Swiss -Institute of Bioinformatics provides the ESTScan program WITHOUT ANY -WARRANTY OF MERCHANTABILITY OR FITNESS FOR ANY PARTICULAR PURPOSE, OR -ANY OTHER WARRANTY, EXPRESS OR IMPLIED. - - -License Terms: - -Use, Modification and Redistribution (including distribution of any -modified or derived work) in source and binary forms is permitted only -if each of the following conditions is met: - -1. Redistributions qualify as "freeware" or "Open Source Software" under - one of the following terms: - - (a) Redistributions are made at no charge beyond the reasonable cost of - materials and delivery. - - (b) Redistributions are accompanied by a copy of the Source Code or by an - irrevocable offer to provide a copy of the Source Code for up to three - years at the cost of materials and delivery. Such redistributions - must allow further use, modification, and redistribution of the Source - Code under substantially the same terms as this license. For the - purposes of redistribution "Source Code" means the complete source - code of ESTScan including all modifications. - - Other forms of redistribution are allowed only under a separate royalty- - free agreement permitting such redistribution subject to standard - commercial terms and conditions. A copy of such agreement may be - obtained from the Swiss Institute of Bioinformatics at the above address. - -2. Redistributions of source code must retain the copyright notices as they - appear in each source code file, these license terms, and the - disclaimer/limitation of liability set forth in the introductory paragraph. - -3. Redistributions in binary form must reproduce the Copyright Notice, - these license terms, and the disclaimer/limitation of liability set - forth as above, in the documentation and/or other materials - provided with the distribution. For the purposes of binary distribution - the "Copyright Notice" refers to the following language: - "Copyright (c) 1999, 2004 Swiss Institute of Bioinformatics. -All rights reserved." - -4. Neither the name of the Swiss Institute of Bioinformatics nor - the names of its contributors may be used to endorse or promote - products derived from this software without specific prior written - permission. - -5. All redistributions must comply with the conditions imposed by the - Swiss Institute of Bioinformatics on certain embedded code, whose copyright - notice and conditions for redistribution are as follows: - - (a) Copyright (c) 1999, 2004 Swiss Institute of Bioinformatics. - All rights reserved. - - (b) Redistribution and use in source and binary forms, with or without - modification, are permitted provided that the following conditions - are met: - - (i) Redistributions of source code must retain the above copyright -notice, this list of conditions and the above disclaimer. - - (ii) Redistributions in binary form must reproduce the above -copyright notice, this list of conditions and the following -disclaimer in the documentation and/or other materials provided -with the distribution. - - (iii) All advertising materials mentioning features or use of this -software must display the following acknowledgement: "This -product includes software developed by the Swiss Institute of -Bioinformatics and its contributors." - - (iv) Neither the name of the Institute nor the names of its -contributors may be used to endorse or promote products derived -from this software without specific prior written permission. - -($Id: COPYRIGHT,v 1.1.1.1 2004/12/16 12:44:29 c4chris Exp $ -Version 1.1, last updated 9 December 2004) diff --git
[gentoo-commits] proj/sci:master commit in: licenses/
commit: cff9e5b6f3844cf9de8b4abae817aa214432579b Author: Andrew Ammerlaan gentoo org> AuthorDate: Thu Dec 1 21:57:51 2022 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Thu Dec 1 21:57:51 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=cff9e5b6 licenses: cleanup Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/staden | 76 - 1 file changed, 76 deletions(-) diff --git a/licenses/staden b/licenses/staden deleted file mode 100644 index f2e77291a..0 --- a/licenses/staden +++ /dev/null @@ -1,76 +0,0 @@ -= - -The Staden Package - -Copyright (c) 2003 MEDICAL RESEARCH COUNCIL -All rights reserved - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are met: - - . Redistributions of source code must retain the above copyright notice, -this list of conditions and the following disclaimer. - - . Redistributions in binary form must reproduce the above copyright notice, -this list of conditions and the following disclaimer in the documentation -and/or other materials provided with the distribution. - - . Neither the name of the MEDICAL RESEARCH COUNCIL, THE LABORATORY OF -MOLECULAR BIOLOGY nor the names of its contributors may be used to endorse or -promote products derived from this software without specific prior written -permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND -ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED -WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR -ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES -(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; -LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON -ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -= - -Portions of this code have been modified by the Wellcome Trust Sanger -Institute (Genome Research Limited). In some cases entirely new -programs and/or source files have been created. These are licenced -under essentially the same conditions as the MRC code (with just name -changes). - -The following licence only applies to files bearing the Genome -Research Limited copyright notice: - - - -Copyright (c) 2004 GENOME RESEARCH LIMITED -All rights reserved - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are met: - - . Redistributions of source code must retain the above copyright notice, -this list of conditions and the following disclaimer. - - . Redistributions in binary form must reproduce the above copyright notice, -this list of conditions and the following disclaimer in the documentation -and/or other materials provided with the distribution. - - . Neither the name of the GENOME RESEARCH LIMITED, the WELLCOME TRUST -SANGER INSTITUTE nor the names of its contributors may be used to endorse or -promote products derived from this software without specific prior written -permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND -ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED -WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR -ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES -(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; -LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON -ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -=
[gentoo-commits] proj/sci:master commit in: licenses/
commit: c5f43ce91052de9a3f63987f0527d3572ecad370 Author: Andrew Ammerlaan gentoo org> AuthorDate: Tue Jan 25 15:35:42 2022 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Tue Jan 25 15:35:42 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=c5f43ce9 licenses: drop unused licenses Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/Artistic-Manatee | 50 --- licenses/OBO-Edit | 9 - 2 files changed, 59 deletions(-) diff --git a/licenses/Artistic-Manatee b/licenses/Artistic-Manatee deleted file mode 100644 index 266b5db33..0 --- a/licenses/Artistic-Manatee +++ /dev/null @@ -1,50 +0,0 @@ -The Artistic License - -Preamble - -The intent of this document is to state the conditions under which a Package may be copied, such that the Copyright Holder maintains some semblance of artistic control over the development of the package, while giving the users of the package the right to use and distribute the Package in a more-or-less customary fashion, plus the right to make reasonable modifications. - -Definitions: - -* "Package" refers to the collection of files distributed by the Copyright Holder, and derivatives of that collection of files created through textual modification. -* "Standard Version" refers to such a Package if it has not been modified, or has been modified in accordance with the wishes of the Copyright Holder. -* "Copyright Holder" is whoever is named in the copyright or copyrights for the package. -* "You" is you, if you're thinking about copying or distributing this Package. -* "Reasonable copying fee" is whatever you can justify on the basis of media cost, duplication charges, time of people involved, and so on. (You will not be required to justify it to the Copyright Holder, but only to the computing community at large as a market that must bear the fee.) -* "Freely Available" means that no fee is charged for the item itself, though there may be fees involved in handling the item. It also means that recipients of the item may redistribute it under the same conditions they received it. - -1. You may make and give away verbatim copies of the source form of the Standard Version of this Package without restriction, provided that you duplicate all of the original copyright notices and associated disclaimers. - -2. You may apply bug fixes, portability fixes and other modifications derived from the Public Domain or from the Copyright Holder. A Package modified in such a way shall still be considered the Standard Version. - -3. You may otherwise modify your copy of this Package in any way, provided that you insert a prominent notice in each changed file stating how and when you changed that file, and provided that you do at least ONE of the following: - -a) place your modifications in the Public Domain or otherwise make them Freely Available, such as by posting said modifications to Usenet or an equivalent medium, or placing the modifications on a major archive site such as ftp.uu.net, or by allowing the Copyright Holder to include your modifications in the Standard Version of the Package. - -b) use the modified Package only within your corporation or organization. - -c) rename any non-standard executables so the names do not conflict with standard executables, which must also be provided, and provide a separate manual page for each non-standard executable that clearly documents how it differs from the Standard Version. - -d) make other distribution arrangements with the Copyright Holder. - -4. You may distribute the programs of this Package in object code or executable form, provided that you do at least ONE of the following: - -a) distribute a Standard Version of the executables and library files, together with instructions (in the manual page or equivalent) on where to get the Standard Version. - -b) accompany the distribution with the machine-readable source of the Package with your modifications. - -c) accompany any non-standard executables with their corresponding Standard Version executables, giving the non-standard executables non-standard names, and clearly documenting the differences in manual pages (or equivalent), together with instructions on where to get the Standard Version. - -d) make other distribution arrangements with the Copyright Holder. - -5. You may charge a reasonable copying fee for any distribution of this Package. You may charge any fee you choose for support of this Package. You may not charge a fee for this Package itself. However, you may distribute this Package in aggregate with other (possibly commercial) programs as part of a larger (possibly commercial) software distribution provided that you do not advertise this Package as a product of your own. - -6. The scripts and library files supplied as input to or produced as output from the programs of this
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 44ef4ef61f25a3d645ce3f313b407ee98f05641d Author: Andrew Ammerlaan gentoo org> AuthorDate: Sun Jan 23 13:05:31 2022 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Sun Jan 23 13:05:31 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=44ef4ef6 licenses: remove unused license Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/CeCILL-2.1 | 519 1 file changed, 519 deletions(-) diff --git a/licenses/CeCILL-2.1 b/licenses/CeCILL-2.1 deleted file mode 100644 index b705f37a2..0 --- a/licenses/CeCILL-2.1 +++ /dev/null @@ -1,519 +0,0 @@ - - CeCILL FREE SOFTWARE LICENSE AGREEMENT - -Version 2.1 dated 2013-06-21 - - -Notice - -This Agreement is a Free Software license agreement that is the result -of discussions between its authors in order to ensure compliance with -the two main principles guiding its drafting: - - * firstly, compliance with the principles governing the distribution -of Free Software: access to source code, broad rights granted to users, - * secondly, the election of a governing law, French law, with which it -is conformant, both as regards the law of torts and intellectual -property law, and the protection that it offers to both authors and -holders of the economic rights over software. - -The authors of the CeCILL (for Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre]) -license are: - -Commissariat � l'�nergie atomique et aux �nergies alternatives - CEA, a -public scientific, technical and industrial research establishment, -having its principal place of business at 25 rue Leblanc, immeuble Le -Ponant D, 75015 Paris, France. - -Centre National de la Recherche Scientifique - CNRS, a public scientific -and technological establishment, having its principal place of business -at 3 rue Michel-Ange, 75794 Paris cedex 16, France. - -Institut National de Recherche en Informatique et en Automatique - -Inria, a public scientific and technological establishment, having its -principal place of business at Domaine de Voluceau, Rocquencourt, BP -105, 78153 Le Chesnay cedex, France. - - -Preamble - -The purpose of this Free Software license agreement is to grant users -the right to modify and redistribute the software governed by this -license within the framework of an open source distribution model. - -The exercising of this right is conditional upon certain obligations for -users so as to preserve this status for all subsequent redistributions. - -In consideration of access to the source code and the rights to copy, -modify and redistribute granted by the license, users are provided only -with a limited warranty and the software's author, the holder of the -economic rights, and the successive licensors only have limited liability. - -In this respect, the risks associated with loading, using, modifying -and/or developing or reproducing the software by the user are brought to -the user's attention, given its Free Software status, which may make it -complicated to use, with the result that its use is reserved for -developers and experienced professionals having in-depth computer -knowledge. Users are therefore encouraged to load and test the -suitability of the software as regards their requirements in conditions -enabling the security of their systems and/or data to be ensured and, -more generally, to use and operate it in the same conditions of -security. This Agreement may be freely reproduced and published, -provided it is not altered, and that no provisions are either added or -removed herefrom. - -This Agreement may apply to any or all software for which the holder of -the economic rights decides to submit the use thereof to its provisions. - -Frequently asked questions can be found on the official website of the -CeCILL licenses family (http://www.cecill.info/index.en.html) for any -necessary clarification. - - -Article 1 - DEFINITIONS - -For the purpose of this Agreement, when the following expressions -commence with a capital letter, they shall have the following meaning: - -Agreement: means this license agreement, and its possible subsequent -versions and annexes. - -Software: means the software in its Object Code and/or Source Code form -and, where applicable, its documentation, "as is" when the Licensee -accepts the Agreement. - -Initial Software: means the Software in its Source Code and possibly its -Object Code form and, where applicable, its documentation, "as is" when -it is first distributed under the terms and conditions of the Agreement. - -Modified Software: means the Software modified by at least one -Contribution. - -Source Code: means all the Software's instructions and program lines to -which access is required so as to modify the Software. - -Object Code: means the binary files originating from the compilation of -the Source Code. - -Holder: means the holder(s) of the economic rights over the Initial -Software. - -Licensee: means the Software
[gentoo-commits] proj/sci:master commit in: licenses/, sci-mathematics/scilab-bin/
commit: d016c223d9e994ce2b650a48dd78b9e4089e2725 Author: Andrew Ammerlaan gentoo org> AuthorDate: Tue Jan 11 18:55:05 2022 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Tue Jan 11 18:59:43 2022 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=d016c223 sci-mathematics/scilab-bin: add version 6.1.1 I officially give up on making a non-bin ebuild. There are several problems: 1. The java dependencies are extremely difficult because of packaging systems that portage does not support (gralde, maven etc). We can hack around this as we did in dev-java/lucene::sci, but that is *a lot* of work, for a lot of dependencies that has to be redone on each version bump. We can solve this problem by getting the pre-compiled java dependencies from https://github.com/scilab/scilab-prerequirements. However 2. Scilab requires versions of libraries that we do not package any more in ::gentoo (e.g. hdf5). And adding and maintaining ebuilds for those old libraries is too much work. 3. If we take *only* the java stuff from scilab/scilab-prerequirements, build fails (likely incompatibility with certain versions of some non-java libraries, see 2.) 4. If we take *all* of scilab/scilab-prerequirements build still fails (with a different error this time). 5. The amount of scilab dependencies that are being last-rited and I therefore have to move to ::science to keep the dependencies resolving is increasing. Scilab is the number 1 cause of ::science breaking at the moment. Long story short, please enjoy this pre-compiled binary ebuild that actually works and will save us all a lot of headache. Closes: https://bugs.gentoo.org/237572 Closes: https://bugs.gentoo.org/691272 Closes: https://github.com/gentoo/sci/issues/879 Closes: https://github.com/gentoo/sci/issues/774 Package-Manager: Portage-3.0.30, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/jing | 85 licenses/sun-bcla-jhall| 234 + sci-mathematics/scilab-bin/metadata.xml| 15 ++ sci-mathematics/scilab-bin/scilab-bin-6.1.1.ebuild | 78 +++ 4 files changed, 412 insertions(+) diff --git a/licenses/jing b/licenses/jing new file mode 100644 index 0..0833c55c8 --- /dev/null +++ b/licenses/jing @@ -0,0 +1,85 @@ +http://www.w3.org/1999/xhtml;> + +Jing Copying Conditions + + + +Jing Copying Conditions + +Copyright (c) 2001-2003 Thai Open Source Software Center Ltd +All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are +met: + + +Redistributions of source code must retain the above copyright +notice, this list of conditions and the following disclaimer. + +Redistributions in binary form must reproduce the above copyright +notice, this list of conditions and the following disclaimer in +the documentation and/or other materials provided with the +distribution. + +Neither the name of the Thai Open Source Software Center Ltd nor +the names of its contributors may be used to endorse or promote +products derived from this software without specific prior written +permission. + + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS +"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT +LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR +A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR +CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, +EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, +PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR +PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF +LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING +NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +Third-party JARs + +This distribution includes some additional JAR files, which have +their own copying conditions: + + + +saxon.jar + +Comes from the http://saxon.sourceforge.net/;>Saxon +6.5.2 distribution and is covered by these http://saxon.sourceforge.net/saxon6.5.2/conditions.html;>conditions + +xercesImpl.jar +xml-apis.jar +Come from the http://xml.apache.org/xerces2-j/;>Xerces-J 2.4.0 +distribution and are covered by the Apache +Software License + +isorelax.jar +Comes from http://sourceforge.net/projects/iso-relax/;>ISO RELAX +2003/01/08 distribution and is covered by the following license: + +Copyright (c) 2001-2002, SourceForge ISO-RELAX Project (ASAMI Tomoharu, Daisuke +Okajima, Kohsuke Kawaguchi, and MURATA Makoto) + +Permission is hereby granted, free of charge, to any person obtaining a copy of +this software and associated documentation files (the "Software"), to deal in the Software without restriction, including
[gentoo-commits] proj/sci:master commit in: licenses/
commit: a0437da7f9c2f5739b9eb64cf9f32dc6fdfaf3aa Author: Andrew Ammerlaan gentoo org> AuthorDate: Tue Aug 31 09:44:58 2021 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Tue Aug 31 09:44:58 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=a0437da7 licenses: remove unused license Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/UPennState | 7 --- 1 file changed, 7 deletions(-) diff --git a/licenses/UPennState b/licenses/UPennState deleted file mode 100644 index 8d2c6b44f..0 --- a/licenses/UPennState +++ /dev/null @@ -1,7 +0,0 @@ -Copyright (c) 2012 University of Pennsylvania - -Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: - -The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. - -THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 6a7624d71fd4b918e87a4fdab1e70974fa8d21e5 Author: Andrew Ammerlaan gentoo org> AuthorDate: Sat Jul 3 10:20:46 2021 + Commit: Andrew Ammerlaan gentoo org> CommitDate: Sat Jul 3 10:20:46 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=6a7624d7 licenses/netCDF: remove unused license Signed-off-by: Andrew Ammerlaan gentoo.org> licenses/netCDF | 31 --- 1 file changed, 31 deletions(-) diff --git a/licenses/netCDF b/licenses/netCDF deleted file mode 100644 index 780ba9ee5..0 --- a/licenses/netCDF +++ /dev/null @@ -1,31 +0,0 @@ -Copyright 1993-2012 University Corporation for Atmospheric Research/Unidata - -Portions of this software were developed by the Unidata Program at the -University Corporation for Atmospheric Research. - -Access and use of this software shall impose the following obligations -and understandings on the user. The user is granted the right, without -any fee or cost, to use, copy, modify, alter, enhance and distribute -this software, and any derivative works thereof, and its supporting -documentation for any purpose whatsoever, provided that this entire -notice appears in all copies of the software, derivative works and -supporting documentation. Further, UCAR requests that the user credit -UCAR/Unidata in any publications that result from the use of this -software or in any product that includes this software, although this -is not an obligation. The names UCAR and/or Unidata, however, may not -be used in any advertising or publicity to endorse or promote any -products or commercial entity unless specific written permission is -obtained from UCAR/Unidata. The user also understands that -UCAR/Unidata is not obligated to provide the user with any support, -consulting, training or assistance of any kind with regard to the use, -operation and performance of this software nor to provide the user -with any updates, revisions, new versions or "bug fixes." - -THIS SOFTWARE IS PROVIDED BY UCAR/UNIDATA "AS IS" AND ANY EXPRESS OR -IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED -WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL UCAR/UNIDATA BE LIABLE FOR ANY SPECIAL, -INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING -FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, -NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION -WITH THE ACCESS, USE OR PERFORMANCE OF THIS SOFTWARE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 43858d1c48983cf88989922eca5105bd6951b705
Author: Andrew Ammerlaan riseup net>
AuthorDate: Sat Mar 6 16:46:53 2021 +
Commit: Andrew Ammerlaan riseup net>
CommitDate: Sat Mar 6 16:46:53 2021 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=43858d1c
licenses: clean up unused licenses
Signed-off-by: Andrew Ammerlaan riseup.net>
licenses/bcca_2010 | 453 -
1 file changed, 453 deletions(-)
diff --git a/licenses/bcca_2010 b/licenses/bcca_2010
deleted file mode 100644
index c8874f8c5..0
--- a/licenses/bcca_2010
+++ /dev/null
@@ -1,453 +0,0 @@
-BC CANCER AGENCY SOFTWARE LICENSE AGREEMENT (ACADEMIC USE)
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-employer, educational institution or organization (collectively, "You")
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-and the British Columbia Cancer Agency ("BCCA") with respect to the
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-license of the software, including all associated documentation
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-(collectively, the "Product").
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-
-
-BCCA is willing to license the Product to You only if You accept the
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-terms and conditions of this Agreement. By clicking on the "I ACCEPT"
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[gentoo-commits] proj/sci:master commit in: licenses/
commit: 71790be27305bd053b4de19f30bba8d9266d4282 Author: Andrew Ammerlaan riseup net> AuthorDate: Thu Feb 25 14:59:39 2021 + Commit: Andrew Ammerlaan riseup net> CommitDate: Thu Feb 25 14:59:39 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=71790be2 licenses/* clean-up unused licenses Signed-off-by: Andrew Ammerlaan riseup.net> licenses/HDecodeCambridge | 68 -- licenses/HTKCambridge | 76 --- 2 files changed, 144 deletions(-) diff --git a/licenses/HDecodeCambridge b/licenses/HDecodeCambridge deleted file mode 100644 index fda09a633..0 --- a/licenses/HDecodeCambridge +++ /dev/null @@ -1,68 +0,0 @@ -HDecode END USER LICENSE AGREEMENT - -1. Definitions - - Licensed Software: All source code, object or executable code, - associated technical documentation and any - data files in this HDecode extension to HTK. - - Licensor : University of Cambridge - - Licensee : The person/organisation who downloads the HDecode - extension to HTK or any part of it. - - -2. License Rights and Obligations - - 2.1 The Licensor hereby grants the Licensee a non-exclusive license to a) make - copies of the Licensed Software in source and object code form for use - within the Licensee's organisation for research purposes only; b) modify - copies of the Licensed Software to create derivative works thereof for use within - the Licensee's organisation for research purposes only; c) make use of models - derived using the licensed Software for research and non-research purposes. - - 2.2 The Licensed Software either in whole or in part can not be distributed - or sub-licensed to any third party in any form. - - 2.3 The Licensee agrees not to remove any copyright, trademark or patent notices - that appear in the Licensed Software. - - 2.4 THE LICENSED SOFTWARE IS PROVIDED "AS IS" WITHOUT ANY WARRANTY OF ANY KIND. - TO THE MAXIMUM EXTENT PERMITTED BY LAW, ANY AND ALL EXPRESS AND IMPLIED - WARRANTIES OF ANY KIND WHATSOEVER, INCLUDING BUT NOT LIMITED TO THOSE OF - MERCHANTABILITY, OF FITNESS FOR A PARTICULAR PURPOSE, OF ACCURACY OR COMPLETENESS - OF RESPONSES, OF RESULTS, OF REASONABLE CARE OR WORKMANLIKE EFFORT, OF LACK OF - NEGLIGENCE, AND/OR OF A LACK OF VIRUSES, ALL WITH REGARD TO THE LICENSED SOFTWARE, - ARE EXPRESSLY EXCLUDED. - - 2.5 THE LICENSEE AGREES THAT LICENSOR SHALL NOT BE - LIABLE FOR ANY CONSEQUENTIAL, INCIDENTAL, INDIRECT, ECONOMIC OR PUNITIVE DAMAGES - WHATSOEVER (INCLUDING BUT NOT LIMITED TO DAMAGES FOR LOSS OF BUSINESS OR PERSONAL - PROFITS, BUSINESS INTERRUPTION, LOSS OF BUSINESS OR PERSONAL OR CONFIDENTIAL - INFORMATION, OR ANY OTHER PECUNIARY LOSS, DAMAGES FOR LOSS OF PRIVACY, OR FOR FAILURE - TO MEET ANY DUTY, INCLUDING ANY DUTY OF GOOD FAITH, OR TO EXERCISE COMMERCIALLY - REASONABLE CARE OR FOR NEGLIGENCE) ARISING OUT OF OR IN ANY WAY RELATED TO THE - USE OF OR INABILITY TO USE THE LICENSED SOFTWARE. - - -3. Term of Agreement - - This agreement is effective upon the download of the Licensed Software and - shall remain in effect until terminated. Termination by the Licensee should be - accompanied by the complete destruction of the Licensed Software and any complete - or partial copies thereof. The Licensor may only terminate this agreement if - the Licensee has failed to abide by the terms of this agreement in which case - termination may be without notice. All provisions of this agreement relating - to disclaimers of warranties, limitation of liability, remedies or damage - and the Licensor's proprietary rights shall survive termination. - - -4. Governing Law - - This agreement shall be construed and interpreted in accordance with the laws - of England. - - -5. Though not a license condition, Licensees are strongly encouraged to - a) report all bugs, where possible with bug fixes, that are found. - b) reference the use of HDecode and HTK in any publications that use the Licensed Software. diff --git a/licenses/HTKCambridge b/licenses/HTKCambridge deleted file mode 100644 index b57936427..0 --- a/licenses/HTKCambridge +++ /dev/null @@ -1,76 +0,0 @@ -HTK END USER LICENSE AGREEMENT - -1. Definitions - - Licensed Software: All source code, object or executable code, - associated technical documentation and any - data files in this HTK distribution. - - Licensor : University of Cambridge - - Licensee : The person/organisation who downloads the HTK - distribution or any part of it. - - -2. License Rights and Obligations - - 2.1 The Licensor hereby grants the Licensee a
[gentoo-commits] proj/sci:master commit in: licenses/
commit: f7cc66277e7d229e6e5d971461d15fea72365e45 Author: Andrew Ammerlaan riseup net> AuthorDate: Thu Feb 4 10:49:42 2021 + Commit: Andrew Ammerlaan riseup net> CommitDate: Thu Feb 4 10:49:42 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=f7cc6627 licenses: remove unused licenses Signed-off-by: Andrew Ammerlaan riseup.net> licenses/mddnmr | 39 -- licenses/stampy-academic | 22 licenses/unio| 133 --- 3 files changed, 194 deletions(-) diff --git a/licenses/mddnmr b/licenses/mddnmr deleted file mode 100644 index dd5c9e910..0 --- a/licenses/mddnmr +++ /dev/null @@ -1,39 +0,0 @@ -Copyright and Legal Information - -Copyright (C) V. Orekhov, V. Jaravine, M. Mayzel, K. Kazimierczuk, Swedish NMR Center, University of Gothenburg, 2004-2011. - -Date: Jul 3, 2011 - -DESCRIPTION -MddNMR is a program for processing uniformly and non-uniformly sampled (sparse) NMR spectra. -The following is legal information pertaining to the use of the MddNMR program. It applies to all MddNMR source files, executable (binary) files, configuration and documentation files contained in the official MddNMR archives. (Certain portions refer to custom versions of the software, there are specific rules listed below for these versions also.) All of these are referred to here as "the software". - -THIS NOTICE MUST ACCOMPANY ALL OFFICIAL OR CUSTOM MddNMR FILES. IT MAY NOT BE REMOVED OR MODIFIED. THIS INFORMATION PERTAINS TO ALL USE OF THE PACKAGE WORLDWIDE. THIS DOCUMENT SUPERSEDES ALL PREVIOUS LICENSES OR DISTRIBUTION POLICIES. - -IMPORTANT LEGAL INFORMATION -While the use MddNMR is essentially free of any costs for noncommercial purposes, commercial users and software developers, who wish to bundle MddNMR with other software, will be asked for support of the research and development of MddNMR. For commercial purposes of MddNMR please contact the copyright holders. Permission is granted to use the MddNMR program and all associated files in this package for making calculations. Use of the software for academic and educational purposes is free. The user retains all rights to the results and may use them for any noncommercial purpose. The following legal information exclusively concerns distribution and use of the software for noncommercial purposes. - -When results obtained by MddNMR are used in lectures, publications or other similar occasions, then a reference to the authors and at least one of the following papers is to be made: -(1) Orekhov, V.Y. and V.A. Jaravine, Analysis of non-?uniformly sampled spectra with Multi-?Dimensional Decomposition. Prog. Nucl. Magn. Reson. Spectrosc., 2011, in press, doi:10.1016/j.pnmrs.2011.02.002 - -(2) Kazimierczuk, K. and V.Y. Orekhov, Accelerated NMR Spectroscopy by Using Compressed Sensing. Angew. Chem.-Int. Edit., 2011, 123, 5670-3 - - -This software package and all of the files in this archive are copyrighted by the authors, which are represented by Prof. Vladislav Orekhov for distribution, copyright and other legal issues (VO). The software may only be distributed and/or modified according to the guidelines listed below. The spirit of the guidelines below is to provide the MddNMR package freely to as many users as possible, prevent MddNMR users and developers from being taken advantage of, enhance the life quality of those who come in contact with MddNMR. This legal document was created so these goals could be realized. You are legally bound to follow these rules, but we hope you will follow them as a matter of ethics, rather than fear of litigation. - -No portion of this package may be separated from the package and distributed separately other than under the conditions specified in the guidelines below. This package may only be bundled in other software packages with the explicit permission of the copyright holders. This package may only be posted in the Internet and/or included in software compilations using media such as, but not limited to, floppy disk, CD-ROM, tape backup, optical disks, hard disks, or memory cards with the explicit permission of the copyright holders. - -CUSTOM VERSIONS -With a separate agreement a user may be granted the privilege to modify and compile the source for their own use in any fashion they see fit. What you do with the software in your home or lab is your business, however, in such cases the activity is usually limited by the agreement or defined by the collaborative project. If the user wishes to distribute a modified version of the software, documentation or other parts of the package (here after referred to as a "custom version") they must follow the guidelines listed below. These guidelines have been established to promote the growth of MddNMR and prevent difficulties for users and developers alike. Please follow them carefully for the benefit
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 8937ae2a57cc2e2aac1b19db1f4100082734683b Author: Andrew Ammerlaan riseup net> AuthorDate: Sat Jan 30 15:23:22 2021 + Commit: Andrew Ammerlaan riseup net> CommitDate: Sat Jan 30 15:23:22 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=8937ae2a lcienses: remove unused license Signed-off-by: Andrew Ammerlaan riseup.net> licenses/vampir | 36 1 file changed, 36 deletions(-) diff --git a/licenses/vampir b/licenses/vampir deleted file mode 100644 index 70f15aa22..0 --- a/licenses/vampir +++ /dev/null @@ -1,36 +0,0 @@ -Copyright (c) 2005-2013, ZIH, TU Dresden, Federal Republic of Germany - -Copyright (c) 1998-2005, Forschungszentrum Juelich, Juelich Supercomputing - Centre, Federal Republic of Germany - -Copyright (c) 2007-2008, High Performance Computing Center Stuttgart, - Federal Republic of Germany - -All rights reserved. - -Redistribution and use in source and binary forms, with or without modification, -are permitted provided that the following conditions are met: - -- Redistributions of source code must retain the above copyright notice, -this list of conditions and the following disclaimer. - -- Redistributions in binary form must reproduce the above copyright notice, -this list of conditions and the following disclaimer in the documentation and/or -other materials provided with the distribution. - -- Neither the name of ZIH, TU Dresden, Forschungszentrum Juelich, Juelich -Supercomputing Centre, or High Performance Computing Center Stuttgart, nor the -names of its contributors may be used to endorse or promote products derived -from this software without pecific prior written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND -ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED -WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR -ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES -(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; -LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON -ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT -(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 12c04b1d2698b267a9e92adae80e5a067e952b9e Author: Fabio Rossi inwind it> AuthorDate: Sun Jan 24 17:10:59 2021 + Commit: Andrew Ammerlaan riseup net> CommitDate: Sun Jan 24 20:47:38 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=12c04b1d licenses: add file for scilab-5.5.2 Signed-off-by: Fabio Rossi inwind.it> Signed-off-by: Andrew Ammerlaan riseup.net> licenses/CeCILL-2.1 | 519 1 file changed, 519 insertions(+) diff --git a/licenses/CeCILL-2.1 b/licenses/CeCILL-2.1 new file mode 100644 index 0..b705f37a2 --- /dev/null +++ b/licenses/CeCILL-2.1 @@ -0,0 +1,519 @@ + + CeCILL FREE SOFTWARE LICENSE AGREEMENT + +Version 2.1 dated 2013-06-21 + + +Notice + +This Agreement is a Free Software license agreement that is the result +of discussions between its authors in order to ensure compliance with +the two main principles guiding its drafting: + + * firstly, compliance with the principles governing the distribution +of Free Software: access to source code, broad rights granted to users, + * secondly, the election of a governing law, French law, with which it +is conformant, both as regards the law of torts and intellectual +property law, and the protection that it offers to both authors and +holders of the economic rights over software. + +The authors of the CeCILL (for Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre]) +license are: + +Commissariat � l'�nergie atomique et aux �nergies alternatives - CEA, a +public scientific, technical and industrial research establishment, +having its principal place of business at 25 rue Leblanc, immeuble Le +Ponant D, 75015 Paris, France. + +Centre National de la Recherche Scientifique - CNRS, a public scientific +and technological establishment, having its principal place of business +at 3 rue Michel-Ange, 75794 Paris cedex 16, France. + +Institut National de Recherche en Informatique et en Automatique - +Inria, a public scientific and technological establishment, having its +principal place of business at Domaine de Voluceau, Rocquencourt, BP +105, 78153 Le Chesnay cedex, France. + + +Preamble + +The purpose of this Free Software license agreement is to grant users +the right to modify and redistribute the software governed by this +license within the framework of an open source distribution model. + +The exercising of this right is conditional upon certain obligations for +users so as to preserve this status for all subsequent redistributions. + +In consideration of access to the source code and the rights to copy, +modify and redistribute granted by the license, users are provided only +with a limited warranty and the software's author, the holder of the +economic rights, and the successive licensors only have limited liability. + +In this respect, the risks associated with loading, using, modifying +and/or developing or reproducing the software by the user are brought to +the user's attention, given its Free Software status, which may make it +complicated to use, with the result that its use is reserved for +developers and experienced professionals having in-depth computer +knowledge. Users are therefore encouraged to load and test the +suitability of the software as regards their requirements in conditions +enabling the security of their systems and/or data to be ensured and, +more generally, to use and operate it in the same conditions of +security. This Agreement may be freely reproduced and published, +provided it is not altered, and that no provisions are either added or +removed herefrom. + +This Agreement may apply to any or all software for which the holder of +the economic rights decides to submit the use thereof to its provisions. + +Frequently asked questions can be found on the official website of the +CeCILL licenses family (http://www.cecill.info/index.en.html) for any +necessary clarification. + + +Article 1 - DEFINITIONS + +For the purpose of this Agreement, when the following expressions +commence with a capital letter, they shall have the following meaning: + +Agreement: means this license agreement, and its possible subsequent +versions and annexes. + +Software: means the software in its Object Code and/or Source Code form +and, where applicable, its documentation, "as is" when the Licensee +accepts the Agreement. + +Initial Software: means the Software in its Source Code and possibly its +Object Code form and, where applicable, its documentation, "as is" when +it is first distributed under the terms and conditions of the Agreement. + +Modified Software: means the Software modified by at least one +Contribution. + +Source Code: means all the Software's instructions and program lines to +which access is required so as to modify the Software. + +Object Code: means the binary files originating from the compilation of +the Source Code. + +Holder: means the holder(s) of the economic rights over the Initial
[gentoo-commits] proj/sci:master commit in: licenses/
commit: fee1c6208ae7cb13e3e8853df7324d5c45edbdf0 Author: Andrew Ammerlaan riseup net> AuthorDate: Tue Jan 19 17:01:21 2021 + Commit: Andrew Ammerlaan riseup net> CommitDate: Tue Jan 19 17:01:21 2021 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=fee1c620 license/ remove unused licenses Signed-off-by: Andrew Ammerlaan riseup.net> licenses/Montage | 90 licenses/bambino | 32 licenses/kash| 19 licenses/mavid | 29 -- 4 files changed, 170 deletions(-) diff --git a/licenses/Montage b/licenses/Montage deleted file mode 100644 index f33d7c8c3..0 --- a/licenses/Montage +++ /dev/null @@ -1,90 +0,0 @@ -CALTECH/JPL -NON-EXCLUSIVE, NON-COMMERCIAL -SOFTWARE LICENSE AGREEMENT - ---MONTAGE(TM) -SOURCE CODE ALLOCATION ---CLICKWRAP LICENSE AGREEMENT-- - -BY CLICKING THE "I AGREE" BUTTON OR BY USING THE SOFTWARE AFTER VIEWING THIS LICENSE, YOU ARE AGREEING TO THE TERMS OF THIS LICENSE AGREEMENT. - -This is a license agreement and not an agreement for sale. This license agreement (Agreement) is between your Company or self for your personal use, and the California Institute of Technology (hereinafter called "LICENSOR" or alternatively CALTECH, through the operating division, Jet Propulsion Laboratory (JPL) of LICENSOR" and gives Licensee certain limited rights to use the proprietary "Montage" Software and Related Material. All rights not specifically granted in this Agreement are reserved to Caltech/JPL. Licensor warrants that it has the right to grant this license of the Software and Related Materials. - -RESERVATION OF OWNERSHIP AND GRANT OF LICENSE: Caltech/JPL retains exclusive ownership of any copy of the Software (as defined below) licensed under this Agreement and hereby grants to Licensee a personal, non-exclusive, non-transferable license to use the Software and Related Materials, without the right to sublicense, for research purposes, and pursuant to the terms and conditions of this Agreement. From the date of receipt, Licensee agrees to use reasonable effort to protect the Software from unauthorized use, reproduction, distribution, or publication. - -CONFIDENTIALITY: Licensee acknowledges that the Software provided under this Agreement is proprietary to Caltech/JPL, and as such, Licensee agrees to receive all such materials in confidence and use the Software only in accordance with the terms of this Agreement. - -COPYRIGHT: The Software is owned by Caltech/JPL and is protected by United States copyright laws and applicable international treaties and/or conventions. The United States Government may have prior rights to use some or all of the Software as determined under applicable contracts and license agreements with Caltech/JPL. - -DEFINITIONS: As used herein, the following words, phrases, or terms in this Agreement shall have the following meanings: - -"Montage(TM)" means the suite of programs, scripts, manuals and procedures received from Caltech/JPL for the purpose of providing a portable, compute-intensive service that will deliver science-grade custom astronomical image mosaics on demand, with requests made through existing portals. - -"Internal" means within the Licensee�s own organization which has been granted this license. - -"Executable Code" means machine-readable code compiled by a high-level compiler. - -"Noncommercial" means for research purposes only, wherein LICENSEE shall earn no fees or costs whatsoever for use of Software and/or Related Materials, and shall not develop or manufacture a Product either directly or indirectly from the Software. - -"Source Code" means code written in human-readable format or in a high-level program language. - -"Software" means the actual copy of all or any portion of the allocated source or executable code for program routines delivered on the media, inclusive of backups, updates, or merged copies permitted hereunder or subsequently supplied by Caltech/JPL. It includes file structures, programming instructions, user interfaces and screen formats and sequences. - -"Related Materials" means all of the printed materials, user documentation, training documentation and confidential software activation code supplied by Caltech/JPL under this Agreement. - - -PERMITTED USES: - -Noncommercial Research: - -The Software may be used for Licensee's own internal research and development or experimental use. Licensee shall report any performance problems to Caltech/JPL for improvement of the software. - -Backups: Licensee may make and maintain backup copies provided Licensee or its archive service delegatee keeps possession of each backup. In addition, Licensee may make that number of copies of the Software necessary for its licensed site provided that all information appearing in or on the original labels, including the copyright and trademark
[gentoo-commits] proj/sci:master commit in: licenses/
commit: de3a571ac73d3234aca8620d9c58592e681e6b40 Author: Aisha Tammy aisha cc> AuthorDate: Thu Dec 31 18:49:19 2020 + Commit: Aisha Tammy aisha cc> CommitDate: Thu Dec 31 18:49:19 2020 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=de3a571a licenses/ATLAS: drop unused license Signed-off-by: Aisha Tammy aisha.cc> licenses/ATLAS | 48 1 file changed, 48 deletions(-) diff --git a/licenses/ATLAS b/licenses/ATLAS deleted file mode 100644 index e6f11a8c9..0 --- a/licenses/ATLAS +++ /dev/null @@ -1,48 +0,0 @@ -NON-COMMERCIAL LICENSE AGREEMENT - -This Non-commercial License Agreement (Agreement) has been adopted for use by Baylor College of Medicine (BCM), a Texas non-profit corporation, for the licensing of software programs for use for internal research purposes only by individuals or employees of an academic institution or private company. - - 1.DEFINITIONS - - 1.1 The term Licensed Code shall mean the software entitled Atlas Whole Genome Assembly Suite, developed -by (in alphabetical order): Rui Chen, James Durbin, Amy Egan, Paul Havlak, and Yanru Ren (collectively the Authors), employees of BCM. - - 2.GRANT OF LICENSE - - 2.1 BCM hereby grants to you, or the corporation or institution you represent, identified in the above form (LICENSEE), a non-exclusive and non-transferable, right and license to use, modify, prepare derivative works of and execute solely for internal, research (non-commercial) purposes, the Licensed Code. This license shall be for use only by the LICENSEE only at the site (physical address) where the code is downloaded. The foregoing license does not include the right to copy the Licensed Code, or portions thereof, to another site for any reason. - - 2.2 LICENSEE acknowledges that the Licensed Code, including, but not limited to, all rights under federal copyright laws, are and shall remain at all times the exclusive property of BCM. Any modifications or derivative works based on the Licensed Code are and shall be considered part of the Licensed Code and ownership thereof is retained by or vested in BCM. LICENSEE shall provide to BCM reports of such modifications or derivative works and such modifications or derivative works shall be made available to BCM upon receipt of a written request for such from BCM. - - 2.3 LICENSEE shall not distribute or transfer the Licensed Code, or any portion thereof, to any other company, -institution or individual without the prior written permission of BCM. - - 3.NO UPGRADES/NO SERVICE/DELIVERED AS IS - - 3.1 It is expressly understood and agreed that the Licensed Code and Manuals will be delivered to LICENSEE on as "AS IS" basis as of the Agreement Date and that neither BCM nor the Authors will be responsible for future support of the Licensed Code. - - 3.2 LICENSEE acknowledges that LICENSEE will not be entitled to any Licensed Code upgrades and that BCM will not provide maintenance for the Licensed Code. If LICENSEE finds defects, bugs, in the Licensed Code, LICENSEE shall notify BCM of the existence of the bugs. Neither BCM nor the Authors shall, however, have any obligation to fix any bugs in the Licensed Code. - - 4.DISCLAIMER OF WARRANTY - - BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, WARRANTIES OF FITNESS OR MERCHANTABILITY, REGARDING OR WITH RESPECT TO THE LICENSED CODE. BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, OF THE PATENTABILITY OR COPYRIGHTABILITY OF ANY OF THE LICENSED CODE OR OF THE ENFORCEABILITY OF ANY PATENTS OR COPYRIGHTS ISSUING THEREUPON, IF ANY, OR THAT THE LICENSED CODE, IS OR SHALL BE FREE FROM INFRINGEMENT OF ANY PATENT, COPYRIGHT OR OTHER RIGHTS OF THIRD PARTIES. BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, THAT THE LICENSED CODE SATISFIES REGULATORY REQUIREMENTS. LICENSEE ACKNOWLEDGE THAT THE LICENSED CODE IS BEING LICENSED AS IS. BCM HAS NOT TESTED THE LICENSED CODE FOR VIRUSES OR OTHER DEFECTS NOR HAS BCM COMPLETED TESTING THE LICENSED CODE. - - 5.LIMITATION OF DAMAGES - - BCM shall not be liable for any monetary damages whatsoever with respect to LICENSEE's use of the Licensed Code nor shall BCM be liable for any special, indirect, incidental or consequential damages arising out of or related to this Agreement, even if BCM is advised of such damages. - - 6.INDEMNIFICATION - - LICENSEE will indemnify and hold BCM, BCM's trustees, officers, agents, employees, students, persons holding academic appointments within BCM, and affiliated hospitals (the Indemnified parties) harmless from and against any and all claims, causes of action or lawsuits for personal injury (including death), property damage, and any other losses of any nature together with related expenses (including attorney's fees) made against the Indemnified parties resulting directly or indirectly from the use or possession
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 938ea5e19f0728f4bc2f9f9adaa49804c324ead1 Author: Aisha Tammy aisha cc> AuthorDate: Wed Dec 30 21:02:25 2020 + Commit: Aisha Tammy aisha cc> CommitDate: Wed Dec 30 21:02:47 2020 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=938ea5e1 licenses/NVIDIA-gdk: no longer needed Signed-off-by: Aisha Tammy aisha.cc> licenses/NVIDIA-gdk | 32 1 file changed, 32 deletions(-) diff --git a/licenses/NVIDIA-gdk b/licenses/NVIDIA-gdk deleted file mode 100644 index 769c505a7..0 --- a/licenses/NVIDIA-gdk +++ /dev/null @@ -1,32 +0,0 @@ -Copyright 1993-2014 NVIDIA Corporation. All rights reserved. - -NOTICE TO USER: - -This source code is subject to NVIDIA ownership rights under U.S. and -international Copyright laws. Users and possessors of this source code -are hereby granted a nonexclusive, royalty-free license to use this code -in individual and commercial software. - -NVIDIA MAKES NO REPRESENTATION ABOUT THE SUITABILITY OF THIS SOURCE -CODE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS OR -IMPLIED WARRANTY OF ANY KIND. NVIDIA DISCLAIMS ALL WARRANTIES WITH -REGARD TO THIS SOURCE CODE, INCLUDING ALL IMPLIED WARRANTIES OF -MERCHANTABILITY, NONINFRINGEMENT, AND FITNESS FOR A PARTICULAR PURPOSE. -IN NO EVENT SHALL NVIDIA BE LIABLE FOR ANY SPECIAL, INDIRECT, INCIDENTAL, -OR CONSEQUENTIAL DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS -OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE -OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE -OR PERFORMANCE OF THIS SOURCE CODE. - -U.S. Government End Users. This source code is a "commercial item" as -that term is defined at 48 C.F.R. 2.101 (OCT 1995), consisting of -"commercial computer software" and "commercial computer software -documentation" as such terms are used in 48 C.F.R. 12.212 (SEPT 1995) -and is provided to the U.S. Government only as a commercial end item. -Consistent with 48 C.F.R.12.212 and 48 C.F.R. 227.7202-1 through -227.7202-4 (JUNE 1995), all U.S. Government End Users acquire the -source code with only those rights set forth herein. - -Any use of this source code in individual and commercial software must -include, in the user documentation and internal comments to the code, -the above Disclaimer and U.S. Government End Users Notice.
[gentoo-commits] proj/sci:master commit in: licenses/, profiles/, sci-mathematics/gappa/, sci-biology/genepop/
commit: 3f26d1a15d016c08e2993e4edd1b1892777aa757
Author: Andrew Ammerlaan riseup net>
AuthorDate: Tue Dec 29 16:29:16 2020 +
Commit: Aisha Tammy aisha cc>
CommitDate: Tue Dec 29 17:10:14 2020 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=3f26d1a1
*/* clean up licenses
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan riseup.net>
Closes: https://github.com/gentoo/sci/pull/1000
Signed-off-by: Aisha Tammy aisha.cc>
licenses/AMD-APPSDK | 267
licenses/CeCILL-2.0 | 505 --
licenses/CeCILL-B| 515 ---
licenses/ECL-2.0 | 97 --
licenses/Intel-SDP | 369 --
licenses/NOSA| 258
licenses/modeller| 19 --
licenses/mpich2 | 39 ---
licenses/phrap | 210 -
profiles/license_groups | 3 +-
sci-biology/genepop/genepop-4.2.1.ebuild | 4 +-
sci-mathematics/gappa/gappa-1.1.1.ebuild | 4 +-
12 files changed, 5 insertions(+), 2285 deletions(-)
diff --git a/licenses/AMD-APPSDK b/licenses/AMD-APPSDK
deleted file mode 100644
index fece351dd..0
--- a/licenses/AMD-APPSDK
+++ /dev/null
@@ -1,267 +0,0 @@
-
- SOFTWARE DEVELOPMENT KIT LICENSE AGREEMENT
- (Linux APP SDK Installer)
-
-IMPORTANT-READ CAREFULLY: This is a legal agreement
-("Agreement") between you and Advanced Micro Devices, Inc.
-("AMD"). Your use of this AMD Software Development Kit, (the
-"SDK") including software, tools, utilities,
-Documentation, and to the extent provided hereunder, Libraries,
-Sample Code, header files, any related AMD materials, and
-updates thereto (collectively, "Licensed Materials"), are
-subject to the following terms and conditions.
-Do not use these Licensed Materials until you have carefully
-read the following terms and conditions. By downloading or
-using the Licensed Materials obtained herewith, you are
-expressly agreeing to all of the following
-terms:
-WARRANTIES, SUPPORT, RIGHTS, AND DAMAGES ARE DISCLAIMED AND/OR
-LIMITED BELOW, PLEASE READ ENTIRELY AND CAREFULLY. IF YOU DO
-NOT AGREE TO THE TERMS OF THIS AGREEMENT, DO NOT DOWNLOAD OR
-USE THE LICENSED MATERIALS OR ANY PORTION THEREOF. DOWNLOADING
-OR USING THE LICENSED MATERIALS OR ANY PORTION THEREOF
-CONSTITUTES YOUR ACCEPTANCE OF THIS AGREEMENT.
-
-1. Definitions.
-
- 1.1. "Documentation" means install scripts and online or
-electronic documentation included with the Licensed
-Materials, or portions thereof.
-
- 1.2. "Free Software License" means an open source or other
-license that requires, as a condition of use, modification or
-distribution, that any resulting software must be (a) disclosed
-or distributed in source code form; (b) licensed for the
-purpose of making derivative works; or (c) re-distributable at
-no charge.
-
- 1.3. "Licensee Software" means any software developed or
-modified by you using the Licensed Materials, and which may
-include any Libraries, Sample Code and/or derivative works of
-Sample Code.
-
- 1.4. "Intellectual Property Rights" means all copyrights,
-trademarks, trade secrets, patents, mask works, and all
-related, similar, or other intellectual property rights
-recognized in any jurisdiction worldwide, including all
-applications and registrations with respect thereto.
-
- 1.5. "Libraries" means any run-times or other functionality
-provided in Object Code including but not limited to codecs and
-video processing libraries.
-
- 1.6. "Object Code" means machine readable computer
-programming code files, which is not in a human readable form.
-
- 1.7. "Sample Code" means the Source Code identified within
-the SDK as sample code.
-
- 1.8. "Source Code" means computer programming code in human
-readable form and related system level documentation, including
-all comments, symbols and any procedural code such as job
-control language.
-
-2 License Grants.
-
- 2.1 Internal Use. Subject to the terms and conditions of
-this Agreement, AMD hereby grants to you a non-exclusive, non-
-transferable, royalty-free copyright license solely for your
-internal use in developing Licensee Software for use with
-products based on or incorporating AMD products (a) to use the
-Licensed Materials, (b) to download, use, copy, and create
-derivative works of Sample Code in Source Code and to create
-compilations of same in Object Code form, and (c) to download,
-use and copy the Libraries.
-
- 2.2 Restrictions. This Agreement does not grant you any
-rights, by license, implication or otherwise, in or to any
-associated materials or technology, except as is expressly
-provided herein. Furthermore, you
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 6d8879da0e5aee2c4d3b132766d28b05511d1437
Author: Andrew Ammerlaan riseup net>
AuthorDate: Sun Dec 20 10:08:24 2020 +
Commit: Aisha Tammy aisha cc>
CommitDate: Sun Dec 20 23:29:37 2020 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=6d8879da
licenses: cleanup
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan riseup.net>
Closes: https://github.com/gentoo/sci/pull/998
Signed-off-by: Aisha Tammy aisha.cc>
licenses/ni-visa | 318 ---
1 file changed, 318 deletions(-)
diff --git a/licenses/ni-visa b/licenses/ni-visa
deleted file mode 100644
index e295937eb..0
--- a/licenses/ni-visa
+++ /dev/null
@@ -1,318 +0,0 @@
-NATIONAL INSTRUMENTS SOFTWARE LICENSE AGREEMENT (LINUX DRIVER SOFTWARE)
-
-
-INSTALLATION NOTICE: THIS IS A CONTRACT. BEFORE YOU DOWNLOAD THE SOFTWARE
AND/OR
-COMPLETE THE INSTALLATION PROCESS, CAREFULLY READ THIS AGREEMENT. BY
DOWNLOADING
-THE SOFTWARE AND/OR ENTERING 'y' TO COMPLETE THE INSTALLATION PROCESS, YOU
-CONSENT TO THE TERMS OF THIS AGREEMENT AND YOU AGREE TO BE BOUND BY THIS
-AGREEMENT. IF YOU DO NOT WISH TO BECOME A PARTY TO THIS AGREEMENT AND BE BOUND
-BY ALL OF ITS TERMS AND CONDITIONS, ENTER 'n' OR 'q' TO CANCEL THE INSTALLATION
-PROCESS, DO NOT INSTALL OR USE THE SOFTWARE, AND RETURN THE SOFTWARE
(INCLUDING,
-IF APPLICABLE, ALL ACCOMPANYING WRITTEN MATERIALS, ALONG WITH THEIR CONTAINERS)
-WITHIN THIRTY (30) DAYS OF RECEIPT OF THE SOFTWARE TO THE PLACE YOU OBTAINED
-THEM. ALL RETURNS SHALL BE SUBJECT TO NI'S THEN CURRENT RETURN POLICY.
-
-
-1. Definitions. As used in this Agreement, the following terms have the
-following meanings:
-
-A. "You." Means you the individual using the SOFTWARE as well as your employer
-if you are using the SOFTWARE within the scope of your employment.
-
-B. "NI." Means (i) National Instruments Corporation, a company organized under
-the laws of the State of Delaware, U.S.A., if the SOFTWARE is manufactured in
-the U.S.A.; (ii) National Instruments Ireland Resources Ltd., a company
-organized under the laws of the Republic of Ireland, if the SOFTWARE is
-manufactured in the Republic of Ireland; and (iii) National Instruments Europe
-Kft, a limited liability company organized under the laws of Hungary, if the
-SOFTWARE is manufactured in Hungary. If you are not sure where the SOFTWARE is
-manufactured, please contact National Instruments Corporation, 11500 N. Mopac
-Expressway, Austin, Texas, U.S.A. 78759-3504 (Attention: Legal Department).
-
-C. "Software." Means all files (including, but not limited to, libraries,
-modules, and programs) provided with this Agreement and which are being
-installed or otherwise used. SOFTWARE includes all Upgrades that may be
provided
-by NI in its discretion.
-
-D. "Upgrade." Means any supplemental or replacement code for computer software
-you have previously licensed from NI.
-
-
-2. Grant of License. In consideration of payment of the applicable fees to NI,
-NI is willing to provide you with a limited, non-exclusive right to use the
-SOFTWARE, but only pursuant to the terms and conditions of this Agreement. The
-SOFTWARE is in "use" when loaded into temporary memory (i.e., RAM) or installed
-into permanent memory (e.g., hard disk, CD-ROM, network storage device, or
other
-storage device). Floating, concurrent, or shared use is not permitted under
this
-Agreement (i.e., allocating an individual license or one seat of a volume
-license to non-simultaneous use of the SOFTWARE (in whole or part) on multiple
-machines). The specific use rights granted you are as follows:
-
-You may install and use the SOFTWARE on as many computers in your workplace as
-you desire; provided, however, that you separately install the SOFTWARE (using
-the accompanying installer) on each such machine.
-
-Notes. The following applies:
-
-Source Code Component. One component of the SOFTWARE, the Kernel Abstraction
-Layer ("KAL"), is provided to you in source code form. All other components of
-the SOFTWARE are provided to you in object code form. You understand that you
-must configure and compile the KAL for use under this Agreement. This
-configuration and compilation process, however, will be completed on your
behalf
-by the installer.
-
-
-3. Restrictions. You may not: (i) for those components of the SOFTWARE
-provided in object code form, reverse engineer, decompile, or disassemble the
-SOFTWARE (except to the extent such foregoing restriction is expressly
-prohibited by applicable law); (ii) sub-license, lease, or rent the SOFTWARE
(in
-whole or part); (iii) (other than as expressly permitted under this Agreement)
-distribute in whole or part, modify, or create derivatives of the SOFTWARE; and
-(iv) directly or indirectly, export, re-export, download, or ship the SOFTWARE
-(in whole or part) in violation of the laws and regulations of the U.S.A. and
-the laws and regulations of the applicable
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 0f9f9e6613a51fdec8ed345d84093136b3dddcb0 Author: Marius Brehler googlemail com> AuthorDate: Fri Jul 12 14:29:55 2019 + Commit: Horea Christian gmail com> CommitDate: Wed Oct 21 14:59:20 2020 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=0f9f9e66 license: Add XVIEW liecense Signed-off-by: Marius Brehler googlemail.com> Signed-off-by: Horea Christian chymera.eu> licenses/XVIEW | 25 + 1 file changed, 25 insertions(+) diff --git a/licenses/XVIEW b/licenses/XVIEW index 114a7416a..02e2fb693 100644 --- a/licenses/XVIEW +++ b/licenses/XVIEW @@ -1,3 +1,28 @@ +This is Debian GNU/Linux's prepackaged version of Sun's xview/olwm/olvwm. +Miscellaneous patches were contributed by: +Kenneth Osterberg +Joern Lubkoll +Oleg Kibirev +Wolfram Gloger +E. Zimmermann +Rainer Wiesner +Sven Rudolph +Sebastiano Suraci +Frodo Looijaard +Roman Hodek +Martin Buck + +This package was put together by Sven Rudolph , +from sources obtained from: +sunsite.unc.edu:/pub/Linux/libs/X/xview/xview3.2p1-X11R6-LinuxELF.2.src.tar.gz + +Starting with xview-3.2p1.4-1, the XView packages are maintained by Martin +Buck , who also maintains the upstream version +ftp://sunsite.unc.edu/pub/Linux/libs/X/xview/xview3.2p1.4.src.tar.gz at the +moment. + +Copyright: + NOTICE TO USER: The source code, including the glyphs or icons forming a par of the OPEN LOOK TM Graphic User Interface, on this tape and in these files is copyrighted under U.S. and international
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 001d1659ac9fc187634ad35515138534be1c5ba1
Author: Marius Brehler googlemail com>
AuthorDate: Fri Jul 12 14:30:24 2019 +
Commit: Horea Christian gmail com>
CommitDate: Tue Oct 20 21:40:02 2020 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=001d1659
license: Remove NVIDIA-CUDA license
Signed-off-by: Marius Brehler googlemail.com>
Signed-off-by: Horea Christian chymera.eu>
licenses/NVIDIA-CUDA | 2297 --
1 file changed, 2297 deletions(-)
diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA
deleted file mode 100644
index e101b27e5..0
--- a/licenses/NVIDIA-CUDA
+++ /dev/null
@@ -1,2297 +0,0 @@
-End User License Agreement
---
-
-
-Preface
-
-The following contains specific license terms and conditions
-for four separate NVIDIA products. By accepting this
-agreement, you agree to comply with all the terms and
-conditions applicable to the specific product(s) included
-herein.
-
-
-NVIDIA CUDA Toolkit
-
-
-Description
-
-The NVIDIA CUDA Toolkit provides command-line and graphical
-tools for building, debugging and optimizing the performance
-of applications accelerated by NVIDIA GPUs, runtime and math
-libraries, and documentation including programming guides,
-user manuals, and API references. The NVIDIA CUDA Toolkit
-License Agreement is available in Chapter 1.
-
-
-Default Install Location of CUDA Toolkit
-
-Windows platform:
-
-%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.#
-
-Linux platform:
-
-/usr/local/cuda-#.#
-
-Mac platform:
-
-/Developer/NVIDIA/CUDA-#.#
-
-
-NVIDIA CUDA Samples
-
-
-Description
-
-This package includes over 100+ CUDA examples that demonstrate
-various CUDA programming principles, and efficient CUDA
-implementation of algorithms in specific application domains.
-The NVIDIA CUDA Samples License Agreement is available in
-Chapter 2.
-
-
-Default Install Location of CUDA Samples
-
-Windows platform:
-
-%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.#
-
-Linux platform:
-
-/usr/local/cuda-#.#/samples
-
-and
-
-$HOME/NVIDIA_CUDA-#.#_Samples
-
-Mac platform:
-
-/Developer/NVIDIA/CUDA-#.#/samples
-
-
-NVIDIA Driver
-
-
-Description
-
-This package contains the operating system driver and
-fundamental system software components for NVIDIA GPUs. The
-NVIDIA Driver License for the Windows platform is available in
-Chapter 3, and the NVIDIA Driver License for the Linux and Mac
-OSX platforms is available in Chapter 4.
-
-
-NVIDIA Nsight Visual Studio Edition (Windows only)
-
-
-Description
-
-NVIDIA Nsight Development Platform, Visual Studio Edition is a
-development environment integrated into Microsoft Visual
-Studio that provides tools for debugging, profiling, analyzing
-and optimizing your GPU computing and graphics applications.
-The NVIDIA Nsight Visual Studio Edition License Agreement is
-available in Chapter 5.
-
-
-Default Install Location of Nsight Visual Studio Edition
-
-Windows platform:
-
-%ProgramFiles(x86)%\NVIDIA Corporation\Nsight Visual Studio Edition #.#
-
-
-NVIDIA CUDA General Terms
-
-
-Description
-
-General terms that apply to all of the software components are
-available in Chapter 6.
-
-
-1. NVIDIA CUDA Toolkit License Agreement
-
-
-
-Important Notice
-
-
-READ CAREFULLY: This Software License Agreement ("Agreement")
-for NVIDIA CUDA Toolkit, including computer software and
-associated documentation ("Software"), is the Agreement which
-governs use of the SOFTWARE of NVIDIA Corporation and its
-subsidiaries ("NVIDIA") downloadable herefrom. By downloading,
-installing, copying, or otherwise using the SOFTWARE, You (as
-defined below) agree to be bound by the terms of this
-Agreement. If You do not agree to the terms of this Agreement,
-do not download the SOFTWARE.
-
-
-Recitals
-
-
-Use of NVIDIA's SOFTWARE requires three elements: the
-SOFTWARE, an NVIDIA GPU or application processor ("NVIDIA
-Hardware"), and a computer system. The SOFTWARE is protected
-by copyright laws and international copyright treaties, as
-well as other intellectual property laws and treaties. The
-SOFTWARE is not sold, and instead is only licensed for Your
-use, strictly in accordance with this Agreement. The NVIDIA
-Hardware is protected by various patents, and is sold, but
-this Agreement does not cover the sale or use of such
-hardware, since it may not necessarily be sold as a package
-with the SOFTWARE. This Agreement sets forth the terms and
-conditions of the SOFTWARE only.
-
-
-1.1. Definitions
-
-
-1.1.1. Licensee
-
-"You", or "Your" shall mean the entity or individual that
-downloads and uses the SOFTWARE.
-
-
-1.1.2. Redistributable Software
-
-"Redistributable Software" shall mean the redistributable
-libraries referenced in Attachment A of this Agreement.
-
-
-1.1.3. Software
-
-"SOFTWARE" shall mean the deliverables provided pursuant to
-this Agreement.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 773db2aafe00c7fcaaf87624cd94ed27b3623f27
Author: Alexey Shvetsov gentoo org>
AuthorDate: Tue Oct 29 08:39:53 2019 +
Commit: Alexey Shvetsov gentoo org>
CommitDate: Tue Oct 29 08:40:58 2019 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=773db2aa
Add UCSF-Motioncor2 license
Signed-off-by: Alexey Shvetsov gentoo.org>
licenses/UCSF-Motioncor2 | 19 +++
1 file changed, 19 insertions(+)
diff --git a/licenses/UCSF-Motioncor2 b/licenses/UCSF-Motioncor2
new file mode 100644
index 0..8a63c50d8
--- /dev/null
+++ b/licenses/UCSF-Motioncor2
@@ -0,0 +1,19 @@
+UCSF MotionCor2 Non-Commercial Software License Agreement
+
+This license agreement ("License"), effective today, is made by and between
you ("Licensee") and The Regents of the University of California, a California
corporation having its statewide administrative offices at Franklin
Street, Oakland, California 94607-5200 ("The Regents"), acting through its
Office of Technology Management, University of California San Francisco
("UCSF"), California Street, Suite S-11, San Francisco, California 94143,
and concerns certain software known as "MotionCor2," a software for correction
of electron beam-induced sample motion in cryo-electron microscopy, for
research purposes and includes executable code, source code, and documentation
("Software"). The Software was developed by the Keck Advanced Microscopy
Laboratory and by Dr. David Agard at UCSF while Dr. Agard was an employee of
Howard Hughes Medical Institute (“HHMI”).
+
+1. General. A non-exclusive, nontransferable, perpetual license is granted
to the Licensee to install and use the Software for academic, non-profit, or
government-sponsored research purposes. Use of the Software under this License
is restricted to non-commercial purposes. Commercial use of the Software
requires a separately executed written license agreement.
+
+2. Permitted Use and Restrictions. Licensee agrees that it will use the
Software, and any modifications, improvements, or derivatives to the Software
that the Licensee may create (collectively, "Improvements") solely for
internal, non-commercial purposes and shall not distribute or transfer the
Software or Improvements to any person or third parties without prior written
permission from The Regents. The term "non-commercial," as used in this
License, means academic or other scholarly research which (a) is not undertaken
for profit, or (b) is not intended to produce works, services, or data for
commercial use, or (c) is neither conducted, nor funded, by a person or an
entity engaged in the commercial use, application or exploitation of works
similar to the Software.
+
+3. Ownership and Assignment of Copyright. The Licensee acknowledges that
The Regents hold copyright in the Software and associated documentation, and
the Software and associated documentation are the property of The Regents. The
Licensee agrees that any Improvements made by Licensee shall be subject to the
same terms and conditions as the Software. Licensee agrees not to assert a
claim of infringement in Licensee copyrights in Improvements in the event The
Regents prepares substantially similar modifications or derivative works. The
Licensee agrees to use his/her reasonable best efforts to protect the contents
of the Software and to prevent unauthorized disclosure by its agents, officers,
employees, and consultants. If the Licensee receives a request to furnish all
or any portion of the Software to a third party, Licensee will not fulfill such
a request but will refer the third party to the UCSF CryoEM Software web page
so that the third party's use of this Software will be subject
to the terms and conditions of this License. Notwithstanding the above,
Licensee may disclose any Improvements that do not involve disclosure of the
Software.
+
+4. Copies. The Licensee may make a reasonable number of copies of the
Software for the purposes of backup, maintenance of the Software or the
development of derivative works based on the Software. These additional copies
shall carry the copyright notice and shall be controlled by this License, and
will be destroyed along with the original by the Licensee upon termination of
the License.
+
+5. Acknowledgement. Licensee agrees that any publication of results
obtained with the Software will acknowledge its use by an appropriate citation
as specified in the documentation.
+
+6. Disclaimer of Warranties and Limitation of Liability. THE LICENSEE
AGREES THAT ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
ARE DISCLAIMED. THE REGENTS MAKES NO REPRESENTATION OR WARRANTY THAT THE
SOFTWARE WILL NOT INFRINGE ANY PATENT OR OTHER PROPRIETARY RIGHT. IN NO EVENT
SHALL THE REGENTS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
EXEMPLARY, OR
[gentoo-commits] proj/sci:master commit in: licenses/
commit: f5dcc43ee2e6cee228e918d821093f593befd9a8 Author: Alexey Shvetsov gentoo org> AuthorDate: Tue Oct 29 08:30:39 2019 + Commit: Alexey Shvetsov gentoo org> CommitDate: Tue Oct 29 08:30:39 2019 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=f5dcc43e [licenses] Add Janelia-1.2 Signed-off-by: Alexey Shvetsov gentoo.org> licenses/Janelia-1.2 | 9 + 1 file changed, 9 insertions(+) diff --git a/licenses/Janelia-1.2 b/licenses/Janelia-1.2 new file mode 100644 index 0..76ce9337b --- /dev/null +++ b/licenses/Janelia-1.2 @@ -0,0 +1,9 @@ +The Janelia Research Campus Software License 1.2 +Copyright (c) 2019, Howard Hughes Medical Institute, All rights reserved. + +Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: + +Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. +Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. +Neither the name of the Howard Hughes Medical Institute nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, ANY IMPLIED WARRANTIES OF MERCHANTABILITY, NON-INFRINGEMENT, OR FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; REASONABLE ROYALTIES; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: dc2aff5fcf8052679743b41e978b130afc286edc Author: Martin Mokrejs fold natur cuni cz> AuthorDate: Sun Jul 7 18:31:34 2019 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Sun Jul 7 18:31:34 2019 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=dc2aff5f Drop the extraneous license file It is just an ordinary 3-clause BSD license. licenses/BSD-3 | 26 -- 1 file changed, 26 deletions(-) diff --git a/licenses/BSD-3 b/licenses/BSD-3 deleted file mode 100644 index 3e6ae8250..0 --- a/licenses/BSD-3 +++ /dev/null @@ -1,26 +0,0 @@ -Copyright (c) 2009-2018, Broad Institute, Inc. All rights reserved. - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are met: - -* Redistributions of source code must retain the above copyright notice, this - list of conditions and the following disclaimer. - -* Redistributions in binary form must reproduce the above copyright notice, - this list of conditions and the following disclaimer in the documentation - and/or other materials provided with the distribution. - -* Neither the name Broad Institute, Inc. nor the names of its - contributors may be used to endorse or promote products derived from - this software without specific prior written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" -AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE -IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE -DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE -FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL -DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR -SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER -CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, -OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE -OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 3f67fa52b5fb5c0a3958751fe227032e7fe88cfa Author: Martin Mokrejs fold natur cuni cz> AuthorDate: Mon Mar 25 09:40:29 2019 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Mon Mar 25 09:40:29 2019 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=3f67fa52 Drop BSD-2 license of sci-biology/tablet licenses/Tablet | 10 -- 1 file changed, 10 deletions(-) diff --git a/licenses/Tablet b/licenses/Tablet deleted file mode 100644 index 296b09c7f..0 --- a/licenses/Tablet +++ /dev/null @@ -1,10 +0,0 @@ -Copyright (c) 2009-2014, Information & Computational Sciences, The James Hutton Institute. -All rights reserved. - -Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: - -1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. - -2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: b39f2a023a6f53c599025f492a86fd1387072728 Author: Justin Lecher gentoo org> AuthorDate: Thu Jun 21 18:43:01 2018 + Commit: Justin Lecher gentoo org> CommitDate: Thu Jun 21 18:43:01 2018 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=b39f2a02 licenses: Add missing licenses Signed-off-by: Justin Lecher gentoo.org> licenses/mpich | 39 + licenses/staden | 76 + 2 files changed, 115 insertions(+) diff --git a/licenses/mpich b/licenses/mpich new file mode 100644 index 0..a9216d495 --- /dev/null +++ b/licenses/mpich @@ -0,0 +1,39 @@ + + COPYRIGHT + +The following is a notice of limited availability of the code, and disclaimer +which must be included in the prologue of the code and in all source listings +of the code. + +Copyright Notice + + 2002 University of Chicago + +Permission is hereby granted to use, reproduce, prepare derivative works, and +to redistribute to others. This software was authored by: + +Mathematics and Computer Science Division +Argonne National Laboratory, Argonne IL 60439 + +(and) + +Department of Computer Science +University of Illinois at Urbana-Champaign + + + GOVERNMENT LICENSE + +Portions of this material resulted from work developed under a U.S. +Government Contract and are subject to the following license: the Government +is granted for itself and others acting on its behalf a paid-up, nonexclusive, +irrevocable worldwide license in this computer software to reproduce, prepare +derivative works, and perform publicly and display publicly. + + DISCLAIMER + +This computer code material was prepared, in part, as an account of work +sponsored by an agency of the United States Government. Neither the United +States, nor the University of Chicago, nor any of their employees, makes any +warranty express or implied, or assumes any legal liability or responsibility +for the accuracy, completeness, or usefulness of any information, apparatus, +product, or process disclosed, or represents that its use would not infringe +privately owned rights. diff --git a/licenses/staden b/licenses/staden new file mode 100644 index 0..f2e77291a --- /dev/null +++ b/licenses/staden @@ -0,0 +1,76 @@ += + +The Staden Package + +Copyright (c) 2003 MEDICAL RESEARCH COUNCIL +All rights reserved + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + + . Redistributions of source code must retain the above copyright notice, +this list of conditions and the following disclaimer. + + . Redistributions in binary form must reproduce the above copyright notice, +this list of conditions and the following disclaimer in the documentation +and/or other materials provided with the distribution. + + . Neither the name of the MEDICAL RESEARCH COUNCIL, THE LABORATORY OF +MOLECULAR BIOLOGY nor the names of its contributors may be used to endorse or +promote products derived from this software without specific prior written +permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND +ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED +WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR +ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES +(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; +LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON +ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT +(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + += + +Portions of this code have been modified by the Wellcome Trust Sanger +Institute (Genome Research Limited). In some cases entirely new +programs and/or source files have been created. These are licenced +under essentially the same conditions as the MRC code (with just name +changes). + +The following licence only applies to files bearing the Genome +Research Limited copyright notice: + + + +Copyright (c) 2004 GENOME RESEARCH LIMITED +All rights reserved + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + + . Redistributions of source code must retain the above copyright notice, +this list of conditions and the following disclaimer. + + . Redistributions in binary form must reproduce the above copyright notice, +this list of
[gentoo-commits] proj/sci:master commit in: licenses/
commit: a6f0158f8e32165560e589c9b45ee4dbfca9089e Author: Martin Mokrejs fold natur cuni cz> AuthorDate: Sat Apr 21 14:12:42 2018 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Sat Apr 21 14:12:42 2018 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=a6f0158f sci-biology/gatk: add the missing license I always forget that repoman ignores license files scheduled for commit and that I have to use 'git commit' solely for that. licenses/BSD-3 | 26 ++ 1 file changed, 26 insertions(+) diff --git a/licenses/BSD-3 b/licenses/BSD-3 new file mode 100644 index 0..3e6ae8250 --- /dev/null +++ b/licenses/BSD-3 @@ -0,0 +1,26 @@ +Copyright (c) 2009-2018, Broad Institute, Inc. All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +* Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + +* Redistributions in binary form must reproduce the above copyright notice, + this list of conditions and the following disclaimer in the documentation + and/or other materials provided with the distribution. + +* Neither the name Broad Institute, Inc. nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" +AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/, profiles/, docs/proj/
commit: 26026cc4488be016748d6fead1ffaa47204f0984 Author: David Seifert gentoo org> AuthorDate: Sat Sep 2 11:38:48 2017 + Commit: David Seifert gentoo org> CommitDate: Sat Sep 2 11:38:48 2017 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=26026cc4 profiles: Remove last mentions of sci-libs/acml docs/proj/blas-lapack.xml | 16 -- docs/proj/linalg.xml | 19 -- licenses/ACML-EULA| 428 -- profiles/license_groups | 2 +- profiles/use.local.desc | 6 - 5 files changed, 1 insertion(+), 470 deletions(-) diff --git a/docs/proj/blas-lapack.xml b/docs/proj/blas-lapack.xml index 8c94990ab..f4ef31cee 100644 --- a/docs/proj/blas-lapack.xml +++ b/docs/proj/blas-lapack.xml @@ -138,12 +138,6 @@ tree: routines. Claims to be the fastest BLAS. -http://developer.amd.com/acml.jsp;>ACML: AMD Core Math -Library is a closed-source but free package containing BLAS (FORTRAN 77 -only) and LAPACK for x86 and amd64 architectures, but also other math tools -such as statistical libraries and FFTs. - - http://developer.intel.com/software/products/mkl/;>MKL: Intel® Math Kernel Library is a closed-source but free package for non-commercial use containing BLAS (FORTRAN 77 and C), LAPACK optimized for @@ -238,8 +232,6 @@ profile combinations that have been used successfully in the past: AMD based CPUs: - blas,lapack: acml-gfortran (or acml-gfortran-openmp with - multi-processors) cblas: reference @@ -292,8 +284,6 @@ compatible. For example: -# F77=ifort FFLAGS="-O2 -mp" USE="openmp" emerge =acml-3.6.0-r1 -# eselect blas set acml-ifort-openmp # F77=gfortran FFLAGS="-O2" emerge lapack-reference @@ -410,12 +400,6 @@ virtuals: virtual/lapack - sci-libs/acml - * - - * - - sci-libs/blas-atlas * * diff --git a/docs/proj/linalg.xml b/docs/proj/linalg.xml index 0da83057b..02ce98bf4 100644 --- a/docs/proj/linalg.xml +++ b/docs/proj/linalg.xml @@ -151,12 +151,6 @@ However, if: and C BLAS routines. Still claims to be the fastest BLAS. -http://developer.amd.com/cpu/libraries/acml/Pages/default.aspx;>ACML: -AMD Core Math Library is a closed-source but free package containing BLAS (FORTRAN 77 -only) and LAPACK for x86 and x86_64 architectures, but also other math tools -such as statistical libraries and FFTs. - - http://software.intel.com/en-us/articles/intel-mkl/;>MKL: Intel® Math Kernel Library is a closed-source but free package for non-commercial use on Linux systems containing implementations of all the linear @@ -256,8 +250,6 @@ Installed CBLAS for library directory lib64 performant on AMD based CPUs: - blas, lapack: acml-gfortran (or acml-gfortran-openmp with - multi-processors) cblas: reference @@ -310,8 +302,6 @@ Installed CBLAS for library directory lib64 -# USE=ifort emerge acml -# eselect blas set acml-ifort-openmp # FC=gfortran FFLAGS="-O2" emerge lapack-reference @@ -453,15 +443,6 @@ Installed CBLAS for library directory lib64 virtual/scalapack - sci-libs/acml - * - - * - - - - - sci-libs/atlas * * diff --git a/licenses/ACML-EULA b/licenses/ACML-EULA deleted file mode 100644 index 870f574b6..0 --- a/licenses/ACML-EULA +++ /dev/null @@ -1,428 +0,0 @@ -LICENSE AGREEMENT -(AMD CORE MATH LIBRARY) - -IMPORTANT—READ CAREFULLY: This is a legal agreement (“Agreement”) between you (“Licensee”) and -Advanced Micro Devices, Inc. (“AMD”). Licensee’s use of this AMD CORE MATH LIBRARY, (“ACML”) -including (a) Documentation; (b) Sample Code; (c) header files, tools and utilities; (d) Libraries; and (e) -Script Files, as listed in Schedule A, and updates thereto (collectively, “Licensed Materials”), are subject to the -following terms and conditions. Do not use these Licensed Materials until you, as Licensee, have carefully read -the following terms and conditions. Note that these Licensed Materials are AMD Confidential Information and -may not be shared with any third party except as expressly provided below. -By downloading or using the Licensed Materials obtained herewith, you, as Licensee, are expressly agreeing to -all of the following terms: -WARRANTIES, SUPPORT, RIGHTS, AND DAMAGES ARE DISCLAIMED AND/OR LIMITED BELOW, PLEASE READ -ENTIRELY AND CAREFULLY. IF YOU DO NOT AGREE TO THE TERMS OF THIS AGREEMENT, DO NOT -DOWNLOAD OR USE THE LICENSED MATERIALS OR ANY PORTION THEREOF. DOWNLOADING OR USING THE -LICENSED MATERIALS OR ANY PORTION THEREOF CONSTITUTES YOUR ACCEPTANCE OF THIS AGREEMENT. - - -1. DEFINITIONS. - -1.1“Derivative Works” means any work, revision, modification or adaptation made to or derived from -the Sample Code or Script Files, or any work that incorporates the Sample Code or Script Files, in whole or in -part. - -1.2
[gentoo-commits] proj/sci:master commit in: licenses/
commit: dd5bb4b8cc71f77e7aad3ab65237d45921dc4f1f
Author: Martin Mokrejš fold natur cuni cz>
AuthorDate: Thu Apr 20 17:27:10 2017 +
Commit: Martin Mokrejs fold natur cuni cz>
CommitDate: Thu Apr 20 17:27:10 2017 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=dd5bb4b8
sci-biology/oncotator: add license file
licenses/oncotator | 46 ++
1 file changed, 46 insertions(+)
diff --git a/licenses/oncotator b/licenses/oncotator
new file mode 100644
index 0..0528987f4
--- /dev/null
+++ b/licenses/oncotator
@@ -0,0 +1,46 @@
+By downloading the PROGRAM you agree to the following terms of use:
+
+BROAD INSTITUTE SOFTWARE LICENSE AGREEMENT
+FOR ACADEMIC NON-COMMERCIAL RESEARCH PURPOSES ONLY
+
+This Agreement is made between the Broad Institute, Inc. with a principal
address at 7 Cambridge Center, Cambridge, MA 02142 ("BROAD") and the LICENSEE
and is effective at the date the downloading is completed ("EFFECTIVE DATE").
+
+WHEREAS, LICENSEE desires to license the PROGRAM, as defined hereinafter, and
BROAD wishes to have this PROGRAM utilized in the public interest, subject only
to the royalty-free, nonexclusive, nontransferable license rights of the United
States Government pursuant to 48 CFR 52.227-14; and
+
+WHEREAS, LICENSEE desires to license the PROGRAM and BROAD desires to grant a
license on the following terms and conditions.
+
+NOW, THEREFORE, in consideration of the promises and covenants made herein,
the parties hereto agree as follows:
+
+1. DEFINITIONS
+1.1 "PROGRAM" shall mean the object code and source code known as Oncotator
1.0 and related documentation, if any, as they exist on the EFFECTIVE DATE and
can be downloaded from http://www.broadinstitute.org/cancer/cga/oncotator on
the EFFECTIVE DATE. BROAD acknowledges that the PROGRAM employs one or more
public domain code(s) that are freely available for public use.
+
+2. LICENSE
+2.1 Grant. Subject to the terms of this Agreement, BROAD hereby grants to
LICENSEE, solely for academic non-commercial research purposes, a
non-exclusive, non-transferable license to: (a) download, execute and display
the PROGRAM and (b) create bug fixes and modify the PROGRAM. LICENSEE hereby
automatically grants to BROAD a non-exclusive, royalty-free, irrevocable
license to any LICENSEE bug fixes or modifications to the PROGRAM with
unlimited rights to sublicense and/or distribute. LICENSEE agrees to provide
any such modifications and bug fixes to BROAD promptly upon their creation.
The LICENSEE may apply the PROGRAM in a pipeline to data owned by users other
than the LICENSEE and provide these users the results of the PROGRAM provided
LICENSEE does so for academic non-commercial purposes only. For clarification
purposes, academic sponsored research is not a commercial use under the terms
of this Agreement.
+2.2 No Sublicensing or Additional Rights. LICENSEE shall not sublicense or
distribute the PROGRAM, in whole or in part, without prior written permission
from BROAD. LICENSEE shall ensure that all of its users agree to the terms of
this Agreement. LICENSEE further agrees that it shall not put the PROGRAM on a
network, server, or other similar technology that may be accessed by anyone
other than the LICENSEE and its employees and users who have agreed to the
terms of this agreement.
+2.3 License Limitations. Nothing in this Agreement shall be construed to
confer any rights upon LICENSEE by implication, estoppel, or otherwise to any
computer software, trademark, intellectual property, or patent rights of BROAD,
or of any other entity, except as expressly granted herein. LICENSEE agrees
that the PROGRAM, in whole or part, shall not be used for any commercial
purpose, including without limitation, as the basis of a commercial software or
hardware product or to provide services. LICENSEE further agrees that the
PROGRAM shall not be copied or otherwise adapted in order to circumvent the
need for obtaining a license for use of the PROGRAM.
+
+3. OWNERSHIP OF INTELLECTUAL PROPERTY
+LICENSEE acknowledges that title to the PROGRAM shall remain with BROAD. The
PROGRAM is marked with the following BROAD copyright notice and notice of
attribution to contributors. LICENSEE shall retain such notice on all copies.
LICENSEE agrees to include appropriate attribution if any results obtained from
use of the PROGRAM are included in any publication.
+
+Copyright 2014 Broad Institute, Inc.
+Notice of attribution: The Oncotator 1.0 program was made available through
the generosity of the Broad Institute, Inc.
+
+LICENSEE shall not use any trademark or trade name of BROAD, or any variation,
adaptation, or abbreviation, of such marks or trade names, or any names of
officers, faculty, students, employees, or agents of BROAD except as states
above for attribution purposes.
+
+4. INDEMNIFICATION
+LICENSEE shall indemnify, defend, and hold harmless
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 405413ad9c289f994da35200f380f226cc553ccc Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Thu Apr 20 17:25:41 2017 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Thu Apr 20 17:25:41 2017 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=405413ad dev-python/pyvcf: add license file licenses/pyvcf | 46 ++ 1 file changed, 46 insertions(+) diff --git a/licenses/pyvcf b/licenses/pyvcf new file mode 100644 index 0..f37927b3a --- /dev/null +++ b/licenses/pyvcf @@ -0,0 +1,46 @@ +Copyright (c) 2011-2012, Population Genetics Technologies Ltd, All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are met: + +1. Redistributions of source code must retain the above copyright notice, this +list of conditions and the following disclaimer. + +2. Redistributions in binary form must reproduce the above copyright notice, this +list of conditions and the following disclaimer in the documentation and/or +other materials provided with the distribution. + +3. Neither the name of the Population Genetics Technologies Ltd nor the names of +its contributors may be used to endorse or promote products derived from this +software without specific prior written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND +ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED +WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE +DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE +FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL +DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR +SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER +CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, +OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE +OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + + +Copyright (c) 2011 John Dougherty + +Permission is hereby granted, free of charge, to any person obtaining a copy of +this software and associated documentation files (the "Software"), to deal in +the Software without restriction, including without limitation the rights to +use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of +the Software, and to permit persons to whom the Software is furnished to do so, +subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all +copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS +FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR +COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER +IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN +CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 77c8f39f7ce54d37cfa849e05027a1b8667f0d9f
Author: Justin Lecher gentoo org>
AuthorDate: Tue Mar 21 19:21:35 2017 +
Commit: Justin Lecher gentoo org>
CommitDate: Tue Mar 21 19:21:35 2017 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=77c8f39f
Add missing license
fixes GH:758
Signed-off-by: Justin Lecher gentoo.org>
licenses/AMD | 188 +++
1 file changed, 188 insertions(+)
diff --git a/licenses/AMD b/licenses/AMD
new file mode 100644
index 0..c1ab25ebf
--- /dev/null
+++ b/licenses/AMD
@@ -0,0 +1,188 @@
+
+AMD Software End User License Agreement
+
+PLEASE READ THIS LICENSE CAREFULLY BEFORE USING THE SOFTWARE. BY
+DOWNLOADING, INSTALLING, COPYING OR USING THE SOFTWARE, YOU ARE AGREEING TO
+BE BOUND BY THE TERMS OF THIS LICENSE. IF YOU ARE ACCESSING THE SOFTWARE
+ELECTRONICALLY, SIGNIFY YOUR AGREEMENT BY CLICKING THE "AGREE/ACCEPT"
+BUTTON. IF YOU DO NOT AGREE TO THE TERMS OF THIS LICENSE, PROMPTLY RETURN
+THE SOFTWARE TO THE PLACE WHERE YOU OBTAINED IT AND (IF APPLICABLE) YOUR
+MONEY WILL BE REFUNDED OR IF THE SOFTWARE WAS ACCESSED ELECTRONICALLY CLICK
+"DISAGREE/DECLINE".
+
+1. License. Advanced Micro Devices, Inc., on behalf of itself, its
+subsidiaries and licensors (referred collectively as "AMD") grants to you
+the following non-exclusive, right to use the software accompanying
+this License (hereinafter "Software") subject to the following terms and
+limitations:
+
+
+(a) Regardless of the media upon which it is distributed, the Software is
+licensed to you for use solely in conjunction with AMD hardware products to
+which the Software relates ("AMD Hardware").
+
+(b) You own the medium on which the Software is recorded, but AMD and, if
+applicable, its licensors retain title to the Software and related
+documentation.
+
+(c) You may:
+
+ i) use the Software solely in connection with the AMD Hardware on a
+ single computer;
+
+ ii) make one copy of the Software in machine-readable form for backup
+ purposes only. You must reproduce on such copy AMD's copyright notice and
+ any other proprietary legends that were on the original copy of the
+ Software;
+
+ iii) transfer all your license rights in the Software provided you must
+ also transfer a copy of this License, the backup copy of the Software,
+ the AMD Hardware and the related documentation and provided the other
+ party reads and agrees to accept the terms and conditions of this
+ License. Upon such transfer your license rights are then terminated.
+
+(d) In addition to the license terms above, with respect to portions of
+the Software in source code or binary form designed exclusively for use
+with the Linux operating system ("AMD Linux Code"), you may use, display,
+modify, copy, distribute, allow others to re-distribute, package and re-
+package such AMD Linux Code for commercial and non-commercial purposes,
+provided that:
+
+ i) all binary components of the AMD Linux Code are not modified in any
+ way;
+
+ ii) the AMD Linux Code is only used as part of the Software and in
+ connection with AMD Hardware;
+
+ iii) all copyright notices of AMD are reproduced and you refer to these
+ license terms;
+
+ iv) you may not offer or impose any terms on the use of AMD Linux
+ Code that alter or restrict this License; and
+
+ v) if you have modified the AMD Linux Code, such modifications will be
+ made publicly available and are licensed under the same terms provided
+ herein to AMD or any other third party without further restriction,
+ royalty or any other license requirement;
+
+ vi) to the extent there is any AMD sample or control panel source
+ code included in the AMD Linux Code, no rights are granted to modify such
+ code except for portions thereof that may be subject to third party
+ license terms that grant such rights;
+
+ vii) no rights are granted to distribute the binary form of the AMD Linux
+ Kernel Module made by linking the AMD Proprietary Kernel Library and the
+ AMD Kernel Compatibility Layer binary compiled using Linux kernel
+ headers;
+
+ viii) AMD is not obligated to provide any maintenance or technical
+ support for any code resulting from AMD Linux Code.
+
+2. Restrictions. The Software contains copyrighted and patented material,
+trade secrets and other proprietary material. In order to protect them,
+and except as permitted by this license or applicable legislation, you may
+not:
+
+ a) decompile, reverse engineer, disassemble or otherwise reduce the
+ Software to a human-perceivable form;
+
+ b) modify, network, rent, lend, loan, distribute or create derivative
+ works based upon the Software in whole or in
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 07c71b0fa89395ed1932637b920ee90ccfcfc569 Author: Marius Brehler linux sungazer de> AuthorDate: Mon Nov 28 20:53:22 2016 + Commit: Marius Brehler linux sungazer de> CommitDate: Mon Nov 28 20:53:22 2016 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=07c71b0f licenses: Add MIT-KhronosGroup license licenses/MIT-KhronosGroup | 25 + 1 file changed, 25 insertions(+) diff --git a/licenses/MIT-KhronosGroup b/licenses/MIT-KhronosGroup new file mode 100644 index 000..e022241 --- /dev/null +++ b/licenses/MIT-KhronosGroup @@ -0,0 +1,25 @@ +Copyright (c) 2008-2015 The Khronos Group Inc. + +Permission is hereby granted, free of charge, to any person obtaining a +copy of this software and/or associated documentation files (the +"Materials"), to deal in the Materials without restriction, including +without limitation the rights to use, copy, modify, merge, publish, +distribute, sublicense, and/or sell copies of the Materials, and to +permit persons to whom the Materials are furnished to do so, subject to +the following conditions: + +The above copyright notice and this permission notice shall be included +in all copies or substantial portions of the Materials. + +MODIFICATIONS TO THIS FILE MAY MEAN IT NO LONGER ACCURATELY REFLECTS +KHRONOS STANDARDS. THE UNMODIFIED, NORMATIVE VERSIONS OF KHRONOS +SPECIFICATIONS AND HEADER INFORMATION ARE LOCATED AT +https://www.khronos.org/registry/ + +THE MATERIALS ARE PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, +EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF +MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. +IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY +CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, +TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE +MATERIALS OR THE USE OR OTHER DEALINGS IN THE MATERIALS.
[gentoo-commits] proj/sci:master commit in: licenses/, sci-mathematics/cdfplayer/
commit: 2204f4317f4a8008f4e4289af3381247cc20c461
Author: Justin Lecher gentoo org>
AuthorDate: Sun Jul 24 15:54:04 2016 +
Commit: Justin Lecher gentoo org>
CommitDate: Sun Jul 24 15:54:04 2016 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=2204f431
Drop cdfplayer as it is in the tree already
Fixes gentoo-science/sci#650
Signed-off-by: Justin Lecher gentoo.org>
licenses/cdfplayer| 143 --
sci-mathematics/cdfplayer/cdfplayer-10.0.2.ebuild | 50
sci-mathematics/cdfplayer/metadata.xml| 15 ---
3 files changed, 208 deletions(-)
diff --git a/licenses/cdfplayer b/licenses/cdfplayer
deleted file mode 100644
index 4977e6b..000
--- a/licenses/cdfplayer
+++ /dev/null
@@ -1,143 +0,0 @@
-Wolfram CDF Player License Agreement
-Acceptance
-
-This is a binding agreement: read all terms; retain a copy.
-
-Carefully read the following terms and conditions before accessing,
installing,
-or using the Software. By clicking the "I Agree" button, downloading the
-Product, or installing/using the Product, You are consenting to be bound by
-this Wolfram CDF Player License Agreement ("Agreement"). If You are not
willing
-to accept the terms and conditions of this Agreement, You may not access,
copy,
-install, or use the Product. You should discontinue use/installation, and
-immediately uninstall/remove/destroy any existing or additional copies of the
-Product.
-Definitions
-
-WRI: Wolfram Research, Inc., 100 Trade Center Drive, Champaign, IL 61820-7237,
-USA.
-
-You/Licensee: The individual or organization obtaining the Product. If
-You/Licensee agree to these terms on behalf of an organization, You represent
-to WRI that You are authorized to accept these terms on the organization's
-behalf.
-
-Software: The computer programs provided by WRI under this Agreement, known as
-CDF Player.
-
-Product: All the materials, including the Software, provided by WRI under this
-Agreement (whether by download or physical storage media), and data accessed
on
-WRI's servers.
-
-Intellectual Property Rights: Any and all rights existing from time to time
-under patent law, copyright law, trade secret law, trademark law, unfair
-competition law, and any and all other proprietary rights, and any and all
-applications, renewals, extensions, and restorations thereof.
-Ownership
-
-WRI is the sole owner of the Product as provided by WRI with the exception of
-the portions of the Product licensed by WRI from third parties. WRI is the
-holder of the Intellectual Property Rights in the Product, including, without
-limitation, such aspects of the Software as its code, structure, sequence,
-organization, "look and feel", programming language, and compilations of
-command names, descriptors, and data. Use of the Product, unless pursuant to
-the terms of a license granted by WRI or as otherwise authorized by law, is an
-infringement of Intellectual Property Rights.
-Product Use
-
-Subject to the terms of this Agreement and Your acceptance thereof, WRI grants
-You a non-exclusive license to install and use the Product on a single online
-storage device solely in accordance with the terms of this Agreement.
-Provisions of this Agreement that by their nature express ongoing rights or
-obligations shall survive the expiration or termination of this Agreement.
-Other than this express Agreement, no other right, title, or interest in or to
-any tangible or intangible property right of WRI is granted, and is expressly
-reserved by WRI.
-Prohibited Uses
-
-All uses of the Software and other elements of the Product not specifically
-allowed under this Agreement are prohibited, including, without limitation:
-
-decompiling, disassembling, or reverse engineering the Software;
-
-modifying the Product in any manner;
-
-distributing, publishing, transferring, sublicensing, lending, leasing,
-renting, or otherwise making available any portion of the Software, including
-collections of data;
-
-copying or allowing copying of the Product or any elements of the Product,
-except as permitted for the maintenance of a single archival copy of the
-Product;
-
-using the Product for anything other than (i) passively viewing .cdf,
.nbp,
-or .nb files and/or (ii) actively running .cdf or .nbp files;
-
-removing or obscuring any copyright, trademark, logo, watermark, or other
-proprietary notices from the Product.
-
-Term and Termination
-
-This Agreement is effective upon Your acceptance of this Agreement, and shall
-continue in effect until terminated. WRI may terminate this Agreement
-immediately in the event of any breach by You of any term herein.
-Online Services and Data
-
-Certain functionality in the Product may require the Software to access
-collections of data available through external servers. WRI makes no warranty
-that access to such data will be uninterrupted or that the
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 05f0a81a083f5f569cd2def52df9291635bf3b82 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Fri Jul 15 13:23:00 2016 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Fri Jul 15 13:23:00 2016 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=05f0a81a sci-biology/stampy: new package; installs into wrong PYTHON library path licenses/stampy-academic | 22 ++ 1 file changed, 22 insertions(+) diff --git a/licenses/stampy-academic b/licenses/stampy-academic new file mode 100644 index 000..31eaa61 --- /dev/null +++ b/licenses/stampy-academic @@ -0,0 +1,22 @@ +This is a release version. Permission is granted for the normal +use of the program and its output in an academic setting, including +in publications. If the program is used to generate data for a +publication, please cite this paper: + + G. Lunter and M. Goodson. Stampy: A statistical algorithm for + sensitive and fast mapping of Illumina sequence reads. Genome + Res. 2011 21:936-939. + +The program itself may not be modified in any way, and may not be +reverse-engineered. + +This license does not allow the use of this program for any +commercial purpose. If you wish to use this program for commercial +purposes, please contact the author. + +No guarantees are given as to the program's correctness, or the +accuracy or completeness of its output. The author accepts no +liability for damage or otherwise following from using and +interpreting the output of this program. The software is supplied +"as is", without obligation by the author to provide any services +or support.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 8b11004681962c01d3ba620522c71597d8e28795
Author: Marius Brehler linux sungazer de>
AuthorDate: Mon May 30 08:44:18 2016 +
Commit: Marius Brehler linux sungazer de>
CommitDate: Mon May 30 08:44:18 2016 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=8b110046
license: Add updates updated NVIDIA-CUDA license
licenses/NVIDIA-CUDA | 2297 ++
1 file changed, 2297 insertions(+)
diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA
new file mode 100644
index 000..e101b27
--- /dev/null
+++ b/licenses/NVIDIA-CUDA
@@ -0,0 +1,2297 @@
+End User License Agreement
+--
+
+
+Preface
+---
+
+The following contains specific license terms and conditions
+for four separate NVIDIA products. By accepting this
+agreement, you agree to comply with all the terms and
+conditions applicable to the specific product(s) included
+herein.
+
+
+NVIDIA CUDA Toolkit
+
+
+Description
+
+The NVIDIA CUDA Toolkit provides command-line and graphical
+tools for building, debugging and optimizing the performance
+of applications accelerated by NVIDIA GPUs, runtime and math
+libraries, and documentation including programming guides,
+user manuals, and API references. The NVIDIA CUDA Toolkit
+License Agreement is available in Chapter 1.
+
+
+Default Install Location of CUDA Toolkit
+
+Windows platform:
+
+%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.#
+
+Linux platform:
+
+/usr/local/cuda-#.#
+
+Mac platform:
+
+/Developer/NVIDIA/CUDA-#.#
+
+
+NVIDIA CUDA Samples
+
+
+Description
+
+This package includes over 100+ CUDA examples that demonstrate
+various CUDA programming principles, and efficient CUDA
+implementation of algorithms in specific application domains.
+The NVIDIA CUDA Samples License Agreement is available in
+Chapter 2.
+
+
+Default Install Location of CUDA Samples
+
+Windows platform:
+
+%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.#
+
+Linux platform:
+
+/usr/local/cuda-#.#/samples
+
+and
+
+$HOME/NVIDIA_CUDA-#.#_Samples
+
+Mac platform:
+
+/Developer/NVIDIA/CUDA-#.#/samples
+
+
+NVIDIA Driver
+
+
+Description
+
+This package contains the operating system driver and
+fundamental system software components for NVIDIA GPUs. The
+NVIDIA Driver License for the Windows platform is available in
+Chapter 3, and the NVIDIA Driver License for the Linux and Mac
+OSX platforms is available in Chapter 4.
+
+
+NVIDIA Nsight Visual Studio Edition (Windows only)
+
+
+Description
+
+NVIDIA Nsight Development Platform, Visual Studio Edition is a
+development environment integrated into Microsoft Visual
+Studio that provides tools for debugging, profiling, analyzing
+and optimizing your GPU computing and graphics applications.
+The NVIDIA Nsight Visual Studio Edition License Agreement is
+available in Chapter 5.
+
+
+Default Install Location of Nsight Visual Studio Edition
+
+Windows platform:
+
+%ProgramFiles(x86)%\NVIDIA Corporation\Nsight Visual Studio Edition #.#
+
+
+NVIDIA CUDA General Terms
+
+
+Description
+
+General terms that apply to all of the software components are
+available in Chapter 6.
+
+
+1. NVIDIA CUDA Toolkit License Agreement
+
+
+
+Important Notice
+
+
+READ CAREFULLY: This Software License Agreement ("Agreement")
+for NVIDIA CUDA Toolkit, including computer software and
+associated documentation ("Software"), is the Agreement which
+governs use of the SOFTWARE of NVIDIA Corporation and its
+subsidiaries ("NVIDIA") downloadable herefrom. By downloading,
+installing, copying, or otherwise using the SOFTWARE, You (as
+defined below) agree to be bound by the terms of this
+Agreement. If You do not agree to the terms of this Agreement,
+do not download the SOFTWARE.
+
+
+Recitals
+
+
+Use of NVIDIA's SOFTWARE requires three elements: the
+SOFTWARE, an NVIDIA GPU or application processor ("NVIDIA
+Hardware"), and a computer system. The SOFTWARE is protected
+by copyright laws and international copyright treaties, as
+well as other intellectual property laws and treaties. The
+SOFTWARE is not sold, and instead is only licensed for Your
+use, strictly in accordance with this Agreement. The NVIDIA
+Hardware is protected by various patents, and is sold, but
+this Agreement does not cover the sale or use of such
+hardware, since it may not necessarily be sold as a package
+with the SOFTWARE. This Agreement sets forth the terms and
+conditions of the SOFTWARE only.
+
+
+1.1. Definitions
+
+
+1.1.1. Licensee
+
+"You", or "Your" shall mean the entity or individual that
+downloads and uses the SOFTWARE.
+
+
+1.1.2. Redistributable Software
+
+"Redistributable Software" shall mean the redistributable
+libraries referenced in Attachment A of this Agreement.
+
+
+1.1.3. Software
+
+"SOFTWARE" shall mean the deliverables provided pursuant to
+this Agreement. SOFTWARE may be provided in either source or
+binary form, at NVIDIA's
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 80be524042758f86d1300a9950b8664bfdd60d5e Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Tue Jan 5 22:28:31 2016 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Tue Jan 5 22:28:31 2016 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=80be5240 sci-biology/genometools: another attempt to add the license licenses/ICS | 14 ++ 1 file changed, 14 insertions(+) diff --git a/licenses/ICS b/licenses/ICS new file mode 100644 index 000..042cd9e --- /dev/null +++ b/licenses/ICS @@ -0,0 +1,14 @@ +Copyright (c) , and CONTRIBUTORS +Copyright (c) + +Permission to use, copy, modify, and distribute this software for any +purpose with or without fee is hereby granted, provided that the above +copyright notice and this permission notice appear in all copies. + +THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES +WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF +MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR +ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES +WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN +ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF +OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 770e6afcc675f1f82c291dcb5db1c42691484f21 Author: Martin Mokrejš fold natur cuni cz> AuthorDate: Tue Jan 5 22:27:25 2016 + Commit: Martin Mokrejs fold natur cuni cz> CommitDate: Tue Jan 5 22:27:25 2016 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=770e6afc sci-biology/mRNAmarkup: another attempt to add the license licenses/mRNAmarkup | 25 + 1 file changed, 25 insertions(+) diff --git a/licenses/mRNAmarkup b/licenses/mRNAmarkup new file mode 100644 index 000..884ed1b --- /dev/null +++ b/licenses/mRNAmarkup @@ -0,0 +1,25 @@ +Copyright (c) 2000 Volker Brendel +All Rights Reserved. E-mail: vbren...@iastate.edu + +Permission to use, copy, modify, and distribute this software and its +documentation for educational, research and non-profit purposes, without fee, +and without a written agreement is hereby granted, provided that the above +copyright notice, this paragraph and the following three paragraphs appear in +all copies. If you modify this file or included files you must cause the +modified files to carry prominent notices stating that you changed the files. + +Inqueries for permission to incorporate this software into commercial products +should be directed to the Office of Intellectual Property and Technology +Transfer, 310 Lab of Mechanics, Iowa State University, Ames, IA 50011, phone: +(515) 294-4740, E-mail: licens...@iastate.edu. + +IN NO EVENT SHALL THE AUTHOR OR IOWA STATE UNIVERSITY BE LIABLE TO ANY PARTY FOR +DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES, INCLUDING LOST +PROFITS, ARISING OUT OF THE USE OF THIS SOFTWARE AND ITS DOCUMENTATION, EVEN IF +IOWA STATE UNIVERSITY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +IOWA STATE UNIVERSITY SPECIFICALLY DISCLAIMS ANY WARRANTIES, INCLUDING, BUT NOT +LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A +PARTICULAR PURPOSE. THE SOFTWARE PROVIDED HEREUNDER IS ON AN "AS IS" BASIS, +AND IOWA STATE UNIVERSITY HAS NO OBLIGATIONS TO PROVIDE MAINTENANCE, SUPPORT, +UPDATES, ENHANCEMENTS, OR MODIFICATIONS.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 08287a03ed55f9c9ca35f44f336c203d85250810
Author: Marius Brehler linux sungazer de>
AuthorDate: Mon Nov 2 08:30:50 2015 +
Commit: Marius Brehler linux sungazer de>
CommitDate: Mon Nov 2 08:30:50 2015 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=08287a03
licenses: Add ccp4 license to overlay
licenses/ccp4 | 371 ++
1 file changed, 371 insertions(+)
diff --git a/licenses/ccp4 b/licenses/ccp4
new file mode 100644
index 000..09c73a6
--- /dev/null
+++ b/licenses/ccp4
@@ -0,0 +1,371 @@
+CCP4 PROGRAM SUITE
+LICENCE AGREEMENT
+(Academic Use)
+THIS LICENCE AGREEMENT is made BETWEEN:
+1. THE COUNCIL FOR THE CENTRAL LABORATORY OF THE RESEARCH
+COUNCILS, an executive Non-Departmental Public Body established as a Research
+Council by Royal Charter under the Science and Technology Act 1965 (“CCLRC”);
+and
+2. [INSERT NAME OF ACADEMIC/RESEARCH INSTITUTION] whose administrative
+offices are at [insert address] ("the Licensee").
+BACKGROUND
+CCLRC has assembled the CCP4 suite of software applications and libraries with
+support
+from the Biotechnology and Biological Sciences Research Council, as part of the
+Collaborative Computational Project Number 4.
+The CCP4 Software Suite comprises:
+a) applications and libraries distributed in source code, that the Licensee
may
+use
+free of charge for Academic Purposes, subject to the terms of clauses 2.1-2.4
of
+this Agreement;
+b) applications and libraries distributed in source code, that the Licensee
may
+use,
+free of charge, subject to the terms of the LGPL or the GPL; and
+c) third party software that is included in the CCP4 suite of programs and
that
+is
+licensed by a third party on that third party's terms and conditions.
+1. DEFINITIONS AND INTERPRETATION
+1.1 In this Agreement the following expressions have the meaning set opposite:
+Academic Purposes: fundamental or basic research or academic teaching,
+including any fundamental research that is funded by any
+public or charitable body, but not any purpose that
+generates revenue (as opposed to grant income) for the
+Licensee or any third party. Any research that is wholly or
+partially sponsored by any profit making organisation or
+that is carried out for the benefit of any profit-making
+organisation is not an Academic Purpose;
+an Application: a software program designed to provide a specific function
+for the user;
+the CCP4 Software: the Libraries and Applications distributed by CCLRC from
+time to time as part of the CCP4 Software Suite, except
+the GNU Software and the Third Party Software;
+the CCP4 Website: the website with the URL www.ccp4.ac.uk;
+the Current Release: Version 5.0 of the Software, and all later versions that
+CCLRC decides may be used under this Agreement;
+a Derived Work: any modification of, or enhancement or improvement to,
+any of the Software and any software or other work
+developed or derived from, or based on, any of the
+Software, or that incorporates any of the Software;
+the LGPL: the GNU Lesser General Public Licence, a copy of which
+appears in Appendix A to this Agreement;
+the GPL: the GNU General Public Licence, a copy of which appears
+in Appendix B to this Agreement;
+the GNU Software: the open source Libraries and Applications that are listed
+on the CCP4 Website from time to time as being subject
+to, respectively, the terms of the LGPL or the GPL;
+a Harmful Element: any virus, worm, time bomb, time lock, drop dead device,
+trap and access code or anything else that might disrupt,
+disable, harm or impede the operation of any information
+system, or that might corrupt, damage, destroy or render
+inaccessible any software, data or file on, or that may
+allow any unauthorised person to gain access to, any
+information system or any software, data or file on it;
+Intellectual Property: patents, trade marks, service marks, registered designs,
+copyrights, database rights, design rights, know-how,
+confidential information, applications for any of the above,
+and any similar right recognised from time to time in any
+jurisdiction, together with all rights of action in relation to
+the infringement of any of the above;
+a Library: a collection of reusable programming routines, software
+functions or data that may be linked to, or used with, an
+Application;
+the Licence Period: the period beginning when the Licensee posts or faxes the
+completed and signed copy of this Agreement to CCLRC
+2
+in accordance with clause 5.1, and ending on the
+termination of this Agreement under clause 5.2;
+the Software: the suite of programs known as CCP4, comprising the
+GNU Software, the CCP4 Software and the Third Party
+Software; and
+the Third Party Software Procheck, FFTw, libjpeg, CBF, Astexviewer, Rasmol and
+Phaser.
+2. LICENCE
+The CCP4 Software
+2.1 CCLRC grants the Licensee a non-exclusive, non-transferable, royalty free
+licence to use,
+copy, modify, and
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 5b1471d22175950842e361103c8ac6962c96394e
Author: Marius Brehler linux sungazer de>
AuthorDate: Mon Sep 21 18:32:17 2015 +
Commit: Justin Lecher gentoo org>
CommitDate: Mon Sep 21 18:32:17 2015 +
URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=5b1471d2
Moved to tree
licenses/NVIDIA-CUDA | 2297 --
1 file changed, 2297 deletions(-)
diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA
deleted file mode 100644
index e101b27..000
--- a/licenses/NVIDIA-CUDA
+++ /dev/null
@@ -1,2297 +0,0 @@
-End User License Agreement
---
-
-
-Preface
-
-The following contains specific license terms and conditions
-for four separate NVIDIA products. By accepting this
-agreement, you agree to comply with all the terms and
-conditions applicable to the specific product(s) included
-herein.
-
-
-NVIDIA CUDA Toolkit
-
-
-Description
-
-The NVIDIA CUDA Toolkit provides command-line and graphical
-tools for building, debugging and optimizing the performance
-of applications accelerated by NVIDIA GPUs, runtime and math
-libraries, and documentation including programming guides,
-user manuals, and API references. The NVIDIA CUDA Toolkit
-License Agreement is available in Chapter 1.
-
-
-Default Install Location of CUDA Toolkit
-
-Windows platform:
-
-%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.#
-
-Linux platform:
-
-/usr/local/cuda-#.#
-
-Mac platform:
-
-/Developer/NVIDIA/CUDA-#.#
-
-
-NVIDIA CUDA Samples
-
-
-Description
-
-This package includes over 100+ CUDA examples that demonstrate
-various CUDA programming principles, and efficient CUDA
-implementation of algorithms in specific application domains.
-The NVIDIA CUDA Samples License Agreement is available in
-Chapter 2.
-
-
-Default Install Location of CUDA Samples
-
-Windows platform:
-
-%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.#
-
-Linux platform:
-
-/usr/local/cuda-#.#/samples
-
-and
-
-$HOME/NVIDIA_CUDA-#.#_Samples
-
-Mac platform:
-
-/Developer/NVIDIA/CUDA-#.#/samples
-
-
-NVIDIA Driver
-
-
-Description
-
-This package contains the operating system driver and
-fundamental system software components for NVIDIA GPUs. The
-NVIDIA Driver License for the Windows platform is available in
-Chapter 3, and the NVIDIA Driver License for the Linux and Mac
-OSX platforms is available in Chapter 4.
-
-
-NVIDIA Nsight Visual Studio Edition (Windows only)
-
-
-Description
-
-NVIDIA Nsight Development Platform, Visual Studio Edition is a
-development environment integrated into Microsoft Visual
-Studio that provides tools for debugging, profiling, analyzing
-and optimizing your GPU computing and graphics applications.
-The NVIDIA Nsight Visual Studio Edition License Agreement is
-available in Chapter 5.
-
-
-Default Install Location of Nsight Visual Studio Edition
-
-Windows platform:
-
-%ProgramFiles(x86)%\NVIDIA Corporation\Nsight Visual Studio Edition #.#
-
-
-NVIDIA CUDA General Terms
-
-
-Description
-
-General terms that apply to all of the software components are
-available in Chapter 6.
-
-
-1. NVIDIA CUDA Toolkit License Agreement
-
-
-
-Important Notice
-
-
-READ CAREFULLY: This Software License Agreement ("Agreement")
-for NVIDIA CUDA Toolkit, including computer software and
-associated documentation ("Software"), is the Agreement which
-governs use of the SOFTWARE of NVIDIA Corporation and its
-subsidiaries ("NVIDIA") downloadable herefrom. By downloading,
-installing, copying, or otherwise using the SOFTWARE, You (as
-defined below) agree to be bound by the terms of this
-Agreement. If You do not agree to the terms of this Agreement,
-do not download the SOFTWARE.
-
-
-Recitals
-
-
-Use of NVIDIA's SOFTWARE requires three elements: the
-SOFTWARE, an NVIDIA GPU or application processor ("NVIDIA
-Hardware"), and a computer system. The SOFTWARE is protected
-by copyright laws and international copyright treaties, as
-well as other intellectual property laws and treaties. The
-SOFTWARE is not sold, and instead is only licensed for Your
-use, strictly in accordance with this Agreement. The NVIDIA
-Hardware is protected by various patents, and is sold, but
-this Agreement does not cover the sale or use of such
-hardware, since it may not necessarily be sold as a package
-with the SOFTWARE. This Agreement sets forth the terms and
-conditions of the SOFTWARE only.
-
-
-1.1. Definitions
-
-
-1.1.1. Licensee
-
-"You", or "Your" shall mean the entity or individual that
-downloads and uses the SOFTWARE.
-
-
-1.1.2. Redistributable Software
-
-"Redistributable Software" shall mean the redistributable
-libraries referenced in Attachment A of this Agreement.
-
-
-1.1.3. Software
-
-"SOFTWARE" shall mean the deliverables provided pursuant to
-this Agreement. SOFTWARE may be provided in either source or
-binary form, at NVIDIA's discretion.
-
-
-1.2. Grant of License
-
-
-1.2.1.
[gentoo-commits] proj/sci:master commit in: licenses/, profiles/
commit: 74337b1caaff959c5ebe7dd038ee052453cb605e Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Wed Jul 8 10:25:59 2015 + Commit: Nicolas Bock nicolasbock AT gentoo DOT org CommitDate: Wed Jul 8 10:25:59 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=74337b1c Add updated NVIDIA-CUDA EULA licenses/NVIDIA-CUDA| 2297 +++ profiles/license_groups |2 +- 2 files changed, 2298 insertions(+), 1 deletion(-) diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA new file mode 100644 index 000..e101b27 --- /dev/null +++ b/licenses/NVIDIA-CUDA @@ -0,0 +1,2297 @@ +End User License Agreement +-- + + +Preface +--- + +The following contains specific license terms and conditions +for four separate NVIDIA products. By accepting this +agreement, you agree to comply with all the terms and +conditions applicable to the specific product(s) included +herein. + + +NVIDIA CUDA Toolkit + + +Description + +The NVIDIA CUDA Toolkit provides command-line and graphical +tools for building, debugging and optimizing the performance +of applications accelerated by NVIDIA GPUs, runtime and math +libraries, and documentation including programming guides, +user manuals, and API references. The NVIDIA CUDA Toolkit +License Agreement is available in Chapter 1. + + +Default Install Location of CUDA Toolkit + +Windows platform: + +%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.# + +Linux platform: + +/usr/local/cuda-#.# + +Mac platform: + +/Developer/NVIDIA/CUDA-#.# + + +NVIDIA CUDA Samples + + +Description + +This package includes over 100+ CUDA examples that demonstrate +various CUDA programming principles, and efficient CUDA +implementation of algorithms in specific application domains. +The NVIDIA CUDA Samples License Agreement is available in +Chapter 2. + + +Default Install Location of CUDA Samples + +Windows platform: + +%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.# + +Linux platform: + +/usr/local/cuda-#.#/samples + +and + +$HOME/NVIDIA_CUDA-#.#_Samples + +Mac platform: + +/Developer/NVIDIA/CUDA-#.#/samples + + +NVIDIA Driver + + +Description + +This package contains the operating system driver and +fundamental system software components for NVIDIA GPUs. The +NVIDIA Driver License for the Windows platform is available in +Chapter 3, and the NVIDIA Driver License for the Linux and Mac +OSX platforms is available in Chapter 4. + + +NVIDIA Nsight Visual Studio Edition (Windows only) + + +Description + +NVIDIA Nsight Development Platform, Visual Studio Edition is a +development environment integrated into Microsoft Visual +Studio that provides tools for debugging, profiling, analyzing +and optimizing your GPU computing and graphics applications. +The NVIDIA Nsight Visual Studio Edition License Agreement is +available in Chapter 5. + + +Default Install Location of Nsight Visual Studio Edition + +Windows platform: + +%ProgramFiles(x86)%\NVIDIA Corporation\Nsight Visual Studio Edition #.# + + +NVIDIA CUDA General Terms + + +Description + +General terms that apply to all of the software components are +available in Chapter 6. + + +1. NVIDIA CUDA Toolkit License Agreement + + + +Important Notice + + +READ CAREFULLY: This Software License Agreement (Agreement) +for NVIDIA CUDA Toolkit, including computer software and +associated documentation (Software), is the Agreement which +governs use of the SOFTWARE of NVIDIA Corporation and its +subsidiaries (NVIDIA) downloadable herefrom. By downloading, +installing, copying, or otherwise using the SOFTWARE, You (as +defined below) agree to be bound by the terms of this +Agreement. If You do not agree to the terms of this Agreement, +do not download the SOFTWARE. + + +Recitals + + +Use of NVIDIA's SOFTWARE requires three elements: the +SOFTWARE, an NVIDIA GPU or application processor (NVIDIA +Hardware), and a computer system. The SOFTWARE is protected +by copyright laws and international copyright treaties, as +well as other intellectual property laws and treaties. The +SOFTWARE is not sold, and instead is only licensed for Your +use, strictly in accordance with this Agreement. The NVIDIA +Hardware is protected by various patents, and is sold, but +this Agreement does not cover the sale or use of such +hardware, since it may not necessarily be sold as a package +with the SOFTWARE. This Agreement sets forth the terms and +conditions of the SOFTWARE only. + + +1.1. Definitions + + +1.1.1. Licensee + +You, or Your shall mean the entity or individual that +downloads and uses the SOFTWARE. + + +1.1.2. Redistributable Software + +Redistributable Software shall mean the redistributable +libraries referenced in Attachment A of this Agreement. + + +1.1.3. Software + +SOFTWARE shall mean the deliverables provided pursuant to +this Agreement. SOFTWARE may be provided in either source or
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 97178f5f459ae3b915b45ae9f71e118ae870afe4 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Tue May 12 11:58:15 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Tue May 12 11:58:15 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=97178f5f Drop NVIDIA-CUDA license licenses/NVIDIA-CUDA | 2262 -- 1 file changed, 2262 deletions(-) diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA deleted file mode 100644 index 44b5705..000 --- a/licenses/NVIDIA-CUDA +++ /dev/null @@ -1,2262 +0,0 @@ -End User License Agreement --- - - -Preface - -The following contains specific license terms and conditions -for four separate NVIDIA products. By accepting this -agreement, you agree to comply with all the terms and -conditions applicable to the specific product(s) included -herein. - - -NVIDIA CUDA Toolkit - - -Description - -The NVIDIA CUDA Toolkit provides command-line and graphical -tools for building, debugging and optimizing the performance -of applications accelerated by NVIDIA GPUs, runtime and math -libraries, and documentation including programming guides, -user manuals, and API references. The NVIDIA CUDA Toolkit -License Agreement is available in Chapter 1. - - -Default Install Location of CUDA Toolkit - -Windows platform: - -%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.# - -Linux platform: - -/usr/local/cuda-#.# - -Mac platform: - -/Developer/NVIDIA/CUDA-#.# - - -NVIDIA CUDA Samples - - -Description - -This package includes over 100+ CUDA examples that demonstrate -various CUDA programming principles, and efficient CUDA -implementation of algorithms in specific application domains. -The NVIDIA CUDA Samples License Agreement is available in -Chapter 2. - - -Default Install Location of CUDA Samples - -Windows platform: - -%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.# - -Linux platform: - -/usr/local/cuda-#.#/samples - -and - -$HOME/NVIDIA_CUDA-#.#_Samples - -Mac platform: - -/Developer/NVIDIA/CUDA-#.#/samples - - -NVIDIA Driver - - -Description - -This package contains the operating system driver and -fundamental system software components for NVIDIA GPUs. The -NVIDIA Driver License for the Windows platform is available in -Chapter 3, and the NVIDIA Driver License for the Linux and Mac -OSX platforms is available in Chapter 4. - - -NVIDIA Nsight Visual Studio Edition (Windows only) - - -Description - -NVIDIA Nsight Development Platform, Visual Studio Edition is a -development environment integrated into Microsoft Visual -Studio that provides tools for debugging, profiling, analyzing -and optimizing your GPU computing and graphics applications. -The NVIDIA Nsight Visual Studio Edition License Agreement is -available in Chapter 5. - - -Default Install Location of Nsight Visual Studio Edition - -Windows platform: - -%ProgramFiles%\NVIDIA Corporation\Nsight Visual Studio Edition #.# - - -NVIDIA CUDA General Terms - - -Description - -General terms that apply to all of the software components are -available in Chapter 6. - - -1. NVIDIA CUDA Toolkit License Agreement - - - -Important Notice - - -READ CAREFULLY: This Software License Agreement (Agreement) -for NVIDIA CUDA Toolkit, including computer software and -associated documentation (Software), is the Agreement which -governs use of the SOFTWARE of NVIDIA Corporation and its -subsidiaries (NVIDIA) downloadable herefrom. By downloading, -installing, copying, or otherwise using the SOFTWARE, You (as -defined below) agree to be bound by the terms of this -Agreement. If You do not agree to the terms of this Agreement, -do not download the SOFTWARE. - - -Recitals - - -Use of NVIDIA's SOFTWARE requires three elements: the -SOFTWARE, an NVIDIA GPU or application processor (NVIDIA -Hardware), and a computer system. The SOFTWARE is protected -by copyright laws and international copyright treaties, as -well as other intellectual property laws and treaties. The -SOFTWARE is not sold, and instead is only licensed for Your -use, strictly in accordance with this Agreement. The NVIDIA -Hardware is protected by various patents, and is sold, but -this Agreement does not cover the sale or use of such -hardware, since it may not necessarily be sold as a package -with the SOFTWARE. This Agreement sets forth the terms and -conditions of the SOFTWARE only. - - -1.1. Definitions - - -1.1.1. Licensee - -You, or Your shall mean the entity or individual that -downloads and uses the SOFTWARE. - - -1.1.2. Redistributable Software - -Redistributable Software shall mean the redistributable -libraries referenced in Attachment A of this Agreement. - - -1.1.3. Software - -SOFTWARE shall mean the deliverables provided pursuant to -this Agreement. SOFTWARE may be provided in either source or -binary form, at NVIDIA's discretion. - - -1.2. Grant of License
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 3b8366c403a62b897bcf338d3f6d5d76e3b63368 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Sat May 9 19:28:30 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Sat May 9 19:28:30 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=3b8366c4 Dummy polyphen license licenses/polyphen | 7 +++ 1 file changed, 7 insertions(+) diff --git a/licenses/polyphen b/licenses/polyphen new file mode 100644 index 000..250b86e --- /dev/null +++ b/licenses/polyphen @@ -0,0 +1,7 @@ +The software provided herein is free for academic instruction and research +use only. Commercial licenses are available to legal entities, including +companies and organizations (both for-profit and non-profit), requiring the +software for general commercial use. To obtain a commercial license please, +contact us via e-mail. + +e-mail: iadzhu...@rics.bwh.harvard.edu \ No newline at end of file
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 158046529325e5a5a62b1c432f4195c9b0a564be Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Mon May 4 07:49:50 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Mon May 4 07:49:50 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=15804652 Add HalfLICENSE licenses/HalfLICENSE | 34 ++ 1 file changed, 34 insertions(+) diff --git a/licenses/HalfLICENSE b/licenses/HalfLICENSE new file mode 100644 index 000..6372750 --- /dev/null +++ b/licenses/HalfLICENSE @@ -0,0 +1,34 @@ +Copyright (c) 2006, Industrial Light Magic, a division of Lucasfilm +Entertainment Company Ltd. Portions contributed and copyright held by +others as indicated. All rights reserved. + +Redistribution and use in source and binary forms, with or without +modification, are permitted provided that the following conditions are +met: + +* Redistributions of source code must retain the above + copyright notice, this list of conditions and the following + disclaimer. + +* Redistributions in binary form must reproduce the above + copyright notice, this list of conditions and the following + disclaimer in the documentation and/or other materials provided with + the distribution. + +* Neither the name of Industrial Light Magic nor the names of + any other contributors to this software may be used to endorse or + promote products derived from this software without specific prior + written permission. + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS +IS AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, +THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR +PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR +CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, +EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, +PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR +PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF +LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING +NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS +SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +
[gentoo-commits] proj/sci:master commit in: licenses/
commit: df801518e8d0357443c54ee1244e9538e5d8ac21 Author: Justin Lecher jlec AT gentoo DOT org AuthorDate: Mon May 4 14:45:33 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Mon May 4 14:45:33 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=df801518 Identical to BSD Signed-off-by: Justin Lecher jlec AT gentoo.org licenses/HalfLICENSE | 34 -- 1 file changed, 34 deletions(-) diff --git a/licenses/HalfLICENSE b/licenses/HalfLICENSE deleted file mode 100644 index 6372750..000 --- a/licenses/HalfLICENSE +++ /dev/null @@ -1,34 +0,0 @@ -Copyright (c) 2006, Industrial Light Magic, a division of Lucasfilm -Entertainment Company Ltd. Portions contributed and copyright held by -others as indicated. All rights reserved. - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are -met: - -* Redistributions of source code must retain the above - copyright notice, this list of conditions and the following - disclaimer. - -* Redistributions in binary form must reproduce the above - copyright notice, this list of conditions and the following - disclaimer in the documentation and/or other materials provided with - the distribution. - -* Neither the name of Industrial Light Magic nor the names of - any other contributors to this software may be used to endorse or - promote products derived from this software without specific prior - written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS -IS AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, -THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR -PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR -CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, -EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, -PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR -PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF -LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING -NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -
[gentoo-commits] proj/sci:master commit in: licenses/
commit: b09146e342f355aed3a70ac3c7f69df63c238a72 Author: Martin Mokrejš mmokrejs AT fold DOT natur DOT cuni DOT cz AuthorDate: Sat Apr 18 01:14:14 2015 + Commit: Martin Mokrejs mmokrejs AT fold DOT natur DOT cuni DOT cz CommitDate: Sat Apr 18 01:14:14 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=b09146e3 sci-biology/rum: added license file licenses/UPennState | 7 +++ 1 file changed, 7 insertions(+) diff --git a/licenses/UPennState b/licenses/UPennState new file mode 100644 index 000..8d2c6b4 --- /dev/null +++ b/licenses/UPennState @@ -0,0 +1,7 @@ +Copyright (c) 2012 University of Pennsylvania + +Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the Software), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED AS IS, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 283e2ab8daf04c108c2fb437dc6db5fbea261f3f Author: Horea Christian h.chr AT mail DOT ru AuthorDate: Fri Mar 13 23:24:51 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Fri Mar 13 23:24:51 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=283e2ab8 new licences needed for FSL package licenses/FSL| 94 + licenses/newmat | 30 ++ 2 files changed, 124 insertions(+) diff --git a/licenses/FSL b/licenses/FSL new file mode 100644 index 000..566feec --- /dev/null +++ b/licenses/FSL @@ -0,0 +1,94 @@ + +FMRIB Software Library, Release 5.0 (c) 2012, The University of Oxford +(the Software) + +The Software remains the property of the University of Oxford (the +University). + +The Software is distributed AS IS under this Licence solely for +non-commercial use in the hope that it will be useful, but in order +that the University as a charitable foundation protects its assets for +the benefit of its educational and research purposes, the University +makes clear that no condition is made or to be implied, nor is any +warranty given or to be implied, as to the accuracy of the Software, +or that it will be suitable for any particular purpose or for use +under any specific conditions. Furthermore, the University disclaims +all responsibility for the use which is made of the Software. It +further disclaims any liability for the outcomes arising from using +the Software. + +The Licensee agrees to indemnify the University and hold the +University harmless from and against any and all claims, damages and +liabilities asserted by third parties (including claims for +negligence) which arise directly or indirectly from the use of the +Software or the sale of any products based on the Software. + +No part of the Software may be reproduced, modified, transmitted or +transferred in any form or by any means, electronic or mechanical, +without the express permission of the University. The permission of +the University is not required if the said reproduction, modification, +transmission or transference is done without financial return, the +conditions of this Licence are imposed upon the receiver of the +product, and all original and amended source code is included in any +transmitted product. You may be held legally responsible for any +copyright infringement that is caused or encouraged by your failure to +abide by these terms and conditions. + +You are not permitted under this Licence to use this Software +commercially. Use for which any financial return is received shall be +defined as commercial use, and includes (1) integration of all or part +of the source code or the Software into a product for sale or license +by or on behalf of Licensee to third parties or (2) use of the +Software or any derivative of it for research with the final aim of +developing software products for sale or license to a third party or +(3) use of the Software or any derivative of it for research with the +final aim of developing non-software products for sale or license to a +third party, or (4) use of the Software to provide any service to an +external organisation for which payment is received. If you are +interested in using the Software commercially, please contact Isis +Innovation Limited (Isis), the technology transfer company of the +University, to negotiate a licence. Contact details are: +innovat...@isis.ox.ac.uk quoting reference BS/9564. + + +--- + +The Standard Space Atlases + +The Cerebellum, Harvard-Oxford, JHU, Juelich, Striatum and Thalamus atlases, +whilst not being the property of Oxford, are released under the terms of the +main FSL licence above, at the request of their owners. These atlases +should therefore not be used for commercial purposes; for such +purposes please contact the primary co-ordinator for the relevant +atlas: + +Harvard-Oxford: st...@fmrib.ox.ac.uk +JHU: sus...@mri.jhu.edu +Juelich: s.eickh...@fz-juelich.de +Thalamus: behr...@fmrib.ox.ac.uk +Cerebellum: j.diedrich...@bangor.ac.uk +Striatum: andri.tzior...@gmail.com + +--- + +FSLView + +FSLView sources are released under the terms of the GPLv2 +(http://www.gnu.org/licenses/old-licenses/gpl-2.0.html). FSLView +binaries use Qt (http://qt.nokia.com) which is released under LGPLv2.1. +The FSLView binaries are released under the GPL, with the added +exception that we also give permission to link this program with the Qt +non-commercial edition, and distribute the resulting executable, +without including the source code for the Qt non-commercial edition in +the source distribution. + +FSLView is distributed AS IS under this Licence in the hope that it +will be useful, but in order that the University as a charitable +foundation protects its assets for the benefit of its educational and +research
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 41980036216a85940abfd6a644702ee1fd9c72f4 Author: Horea Christian h.chr AT mail DOT ru AuthorDate: Fri Mar 13 23:24:51 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Sat Mar 14 08:21:00 2015 + URL:https://gitweb.gentoo.org/proj/sci.git/commit/?id=41980036 new licences needed for FSL package licenses/FSL| 94 + licenses/newmat | 30 ++ 2 files changed, 124 insertions(+) diff --git a/licenses/FSL b/licenses/FSL new file mode 100644 index 000..566feec --- /dev/null +++ b/licenses/FSL @@ -0,0 +1,94 @@ + +FMRIB Software Library, Release 5.0 (c) 2012, The University of Oxford +(the Software) + +The Software remains the property of the University of Oxford (the +University). + +The Software is distributed AS IS under this Licence solely for +non-commercial use in the hope that it will be useful, but in order +that the University as a charitable foundation protects its assets for +the benefit of its educational and research purposes, the University +makes clear that no condition is made or to be implied, nor is any +warranty given or to be implied, as to the accuracy of the Software, +or that it will be suitable for any particular purpose or for use +under any specific conditions. Furthermore, the University disclaims +all responsibility for the use which is made of the Software. It +further disclaims any liability for the outcomes arising from using +the Software. + +The Licensee agrees to indemnify the University and hold the +University harmless from and against any and all claims, damages and +liabilities asserted by third parties (including claims for +negligence) which arise directly or indirectly from the use of the +Software or the sale of any products based on the Software. + +No part of the Software may be reproduced, modified, transmitted or +transferred in any form or by any means, electronic or mechanical, +without the express permission of the University. The permission of +the University is not required if the said reproduction, modification, +transmission or transference is done without financial return, the +conditions of this Licence are imposed upon the receiver of the +product, and all original and amended source code is included in any +transmitted product. You may be held legally responsible for any +copyright infringement that is caused or encouraged by your failure to +abide by these terms and conditions. + +You are not permitted under this Licence to use this Software +commercially. Use for which any financial return is received shall be +defined as commercial use, and includes (1) integration of all or part +of the source code or the Software into a product for sale or license +by or on behalf of Licensee to third parties or (2) use of the +Software or any derivative of it for research with the final aim of +developing software products for sale or license to a third party or +(3) use of the Software or any derivative of it for research with the +final aim of developing non-software products for sale or license to a +third party, or (4) use of the Software to provide any service to an +external organisation for which payment is received. If you are +interested in using the Software commercially, please contact Isis +Innovation Limited (Isis), the technology transfer company of the +University, to negotiate a licence. Contact details are: +innovat...@isis.ox.ac.uk quoting reference BS/9564. + + +--- + +The Standard Space Atlases + +The Cerebellum, Harvard-Oxford, JHU, Juelich, Striatum and Thalamus atlases, +whilst not being the property of Oxford, are released under the terms of the +main FSL licence above, at the request of their owners. These atlases +should therefore not be used for commercial purposes; for such +purposes please contact the primary co-ordinator for the relevant +atlas: + +Harvard-Oxford: st...@fmrib.ox.ac.uk +JHU: sus...@mri.jhu.edu +Juelich: s.eickh...@fz-juelich.de +Thalamus: behr...@fmrib.ox.ac.uk +Cerebellum: j.diedrich...@bangor.ac.uk +Striatum: andri.tzior...@gmail.com + +--- + +FSLView + +FSLView sources are released under the terms of the GPLv2 +(http://www.gnu.org/licenses/old-licenses/gpl-2.0.html). FSLView +binaries use Qt (http://qt.nokia.com) which is released under LGPLv2.1. +The FSLView binaries are released under the GPL, with the added +exception that we also give permission to link this program with the Qt +non-commercial edition, and distribute the resulting executable, +without including the source code for the Qt non-commercial edition in +the source distribution. + +FSLView is distributed AS IS under this Licence in the hope that it +will be useful, but in order that the University as a charitable +foundation protects its assets for the benefit of its educational and +research
[gentoo-commits] proj/sci:master commit in: licenses/, profiles/
commit: c1e7fe492c0ff8f41acc0ce04af5aab8548da4d9 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Sun Feb 1 12:09:36 2015 + Commit: Nicolas Bock nicolasbock AT gentoo DOT org CommitDate: Tue Mar 3 09:17:33 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c1e7fe49 Add AMD-APPSDK license licenses/AMD-APPSDK | 267 profiles/license_groups | 2 +- 2 files changed, 268 insertions(+), 1 deletion(-) diff --git a/licenses/AMD-APPSDK b/licenses/AMD-APPSDK new file mode 100644 index 000..fece351 --- /dev/null +++ b/licenses/AMD-APPSDK @@ -0,0 +1,267 @@ + + SOFTWARE DEVELOPMENT KIT LICENSE AGREEMENT + (Linux APP SDK Installer) + +IMPORTANT-READ CAREFULLY: This is a legal agreement +(Agreement) between you and Advanced Micro Devices, Inc. +(AMD). Your use of this AMD Software Development Kit, (the +SDK) including software, tools, utilities, +Documentation, and to the extent provided hereunder, Libraries, +Sample Code, header files, any related AMD materials, and +updates thereto (collectively, Licensed Materials), are +subject to the following terms and conditions. +Do not use these Licensed Materials until you have carefully +read the following terms and conditions. By downloading or +using the Licensed Materials obtained herewith, you are +expressly agreeing to all of the following +terms: +WARRANTIES, SUPPORT, RIGHTS, AND DAMAGES ARE DISCLAIMED AND/OR +LIMITED BELOW, PLEASE READ ENTIRELY AND CAREFULLY. IF YOU DO +NOT AGREE TO THE TERMS OF THIS AGREEMENT, DO NOT DOWNLOAD OR +USE THE LICENSED MATERIALS OR ANY PORTION THEREOF. DOWNLOADING +OR USING THE LICENSED MATERIALS OR ANY PORTION THEREOF +CONSTITUTES YOUR ACCEPTANCE OF THIS AGREEMENT. + +1. Definitions. + + 1.1. Documentation means install scripts and online or +electronic documentation included with the Licensed +Materials, or portions thereof. + + 1.2. Free Software License means an open source or other +license that requires, as a condition of use, modification or +distribution, that any resulting software must be (a) disclosed +or distributed in source code form; (b) licensed for the +purpose of making derivative works; or (c) re-distributable at +no charge. + + 1.3. Licensee Software means any software developed or +modified by you using the Licensed Materials, and which may +include any Libraries, Sample Code and/or derivative works of +Sample Code. + + 1.4. Intellectual Property Rights means all copyrights, +trademarks, trade secrets, patents, mask works, and all +related, similar, or other intellectual property rights +recognized in any jurisdiction worldwide, including all +applications and registrations with respect thereto. + + 1.5. Libraries means any run-times or other functionality +provided in Object Code including but not limited to codecs and +video processing libraries. + + 1.6. Object Code means machine readable computer +programming code files, which is not in a human readable form. + + 1.7. Sample Code means the Source Code identified within +the SDK as sample code. + + 1.8. Source Code means computer programming code in human +readable form and related system level documentation, including +all comments, symbols and any procedural code such as job +control language. + +2 License Grants. + + 2.1 Internal Use. Subject to the terms and conditions of +this Agreement, AMD hereby grants to you a non-exclusive, non- +transferable, royalty-free copyright license solely for your +internal use in developing Licensee Software for use with +products based on or incorporating AMD products (a) to use the +Licensed Materials, (b) to download, use, copy, and create +derivative works of Sample Code in Source Code and to create +compilations of same in Object Code form, and (c) to download, +use and copy the Libraries. + + 2.2 Restrictions. This Agreement does not grant you any +rights, by license, implication or otherwise, in or to any +associated materials or technology, except as is expressly +provided herein. Furthermore, you acknowledge that except as +expressly provided herein, the Licensed Materials provided by +AMD hereunder are for your internal use only and you may not +sell, transfer, assign, sublicense or distribute the Licensed +Materials, in whole or in part, in any manner. Except as +expressly specified in Section 2.1, you will have no right to +make or have made derivatives of the Licensed Materials, to +reverse engineer, modify, disassemble or to decompile the +Licensed Materials, or otherwise reduce any part of the +Licensed Materials to any human readable form. You will not +use the Licensed Materials in applications intended to support +or sustain life, or in which the failure of your product could +create a situation where personal injury, death, or severe +property
[gentoo-commits] proj/sci:master commit in: licenses/, profiles/
commit: c1e7fe492c0ff8f41acc0ce04af5aab8548da4d9 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Sun Feb 1 12:09:36 2015 + Commit: git@oystercatcher mirror+tproxy git AT oystercatcher DOT gentoo DOT org CommitDate: Tue Mar 3 09:17:33 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c1e7fe49 Add AMD-APPSDK license licenses/AMD-APPSDK | 267 profiles/license_groups | 2 +- 2 files changed, 268 insertions(+), 1 deletion(-) diff --git a/licenses/AMD-APPSDK b/licenses/AMD-APPSDK new file mode 100644 index 000..fece351 --- /dev/null +++ b/licenses/AMD-APPSDK @@ -0,0 +1,267 @@ + + SOFTWARE DEVELOPMENT KIT LICENSE AGREEMENT + (Linux APP SDK Installer) + +IMPORTANT-READ CAREFULLY: This is a legal agreement +(Agreement) between you and Advanced Micro Devices, Inc. +(AMD). Your use of this AMD Software Development Kit, (the +SDK) including software, tools, utilities, +Documentation, and to the extent provided hereunder, Libraries, +Sample Code, header files, any related AMD materials, and +updates thereto (collectively, Licensed Materials), are +subject to the following terms and conditions. +Do not use these Licensed Materials until you have carefully +read the following terms and conditions. By downloading or +using the Licensed Materials obtained herewith, you are +expressly agreeing to all of the following +terms: +WARRANTIES, SUPPORT, RIGHTS, AND DAMAGES ARE DISCLAIMED AND/OR +LIMITED BELOW, PLEASE READ ENTIRELY AND CAREFULLY. IF YOU DO +NOT AGREE TO THE TERMS OF THIS AGREEMENT, DO NOT DOWNLOAD OR +USE THE LICENSED MATERIALS OR ANY PORTION THEREOF. DOWNLOADING +OR USING THE LICENSED MATERIALS OR ANY PORTION THEREOF +CONSTITUTES YOUR ACCEPTANCE OF THIS AGREEMENT. + +1. Definitions. + + 1.1. Documentation means install scripts and online or +electronic documentation included with the Licensed +Materials, or portions thereof. + + 1.2. Free Software License means an open source or other +license that requires, as a condition of use, modification or +distribution, that any resulting software must be (a) disclosed +or distributed in source code form; (b) licensed for the +purpose of making derivative works; or (c) re-distributable at +no charge. + + 1.3. Licensee Software means any software developed or +modified by you using the Licensed Materials, and which may +include any Libraries, Sample Code and/or derivative works of +Sample Code. + + 1.4. Intellectual Property Rights means all copyrights, +trademarks, trade secrets, patents, mask works, and all +related, similar, or other intellectual property rights +recognized in any jurisdiction worldwide, including all +applications and registrations with respect thereto. + + 1.5. Libraries means any run-times or other functionality +provided in Object Code including but not limited to codecs and +video processing libraries. + + 1.6. Object Code means machine readable computer +programming code files, which is not in a human readable form. + + 1.7. Sample Code means the Source Code identified within +the SDK as sample code. + + 1.8. Source Code means computer programming code in human +readable form and related system level documentation, including +all comments, symbols and any procedural code such as job +control language. + +2 License Grants. + + 2.1 Internal Use. Subject to the terms and conditions of +this Agreement, AMD hereby grants to you a non-exclusive, non- +transferable, royalty-free copyright license solely for your +internal use in developing Licensee Software for use with +products based on or incorporating AMD products (a) to use the +Licensed Materials, (b) to download, use, copy, and create +derivative works of Sample Code in Source Code and to create +compilations of same in Object Code form, and (c) to download, +use and copy the Libraries. + + 2.2 Restrictions. This Agreement does not grant you any +rights, by license, implication or otherwise, in or to any +associated materials or technology, except as is expressly +provided herein. Furthermore, you acknowledge that except as +expressly provided herein, the Licensed Materials provided by +AMD hereunder are for your internal use only and you may not +sell, transfer, assign, sublicense or distribute the Licensed +Materials, in whole or in part, in any manner. Except as +expressly specified in Section 2.1, you will have no right to +make or have made derivatives of the Licensed Materials, to +reverse engineer, modify, disassemble or to decompile the +Licensed Materials, or otherwise reduce any part of the +Licensed Materials to any human readable form. You will not +use the Licensed Materials in applications intended to support +or sustain life, or in which the failure of your product could +create a situation where personal
[gentoo-commits] proj/sci:master commit in: licenses/
commit: fc789dccfa9f4ef4a188d37cf92631ff1fd356dc Author: Christoph Junghans ottxor AT gentoo DOT org AuthorDate: Thu Feb 26 01:48:53 2015 + Commit: Christoph Junghans ottxor AT gentoo DOT org CommitDate: Thu Feb 26 01:49:35 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fc789dcc added hoomd-blue license --- licenses/hoomd-blue | 46 ++ 1 file changed, 46 insertions(+) diff --git a/licenses/hoomd-blue b/licenses/hoomd-blue new file mode 100644 index 000..4e38f05 --- /dev/null +++ b/licenses/hoomd-blue @@ -0,0 +1,46 @@ +Highly Optimized Object-oriented Many-particle Dynamics -- Blue Edition +(HOOMD-blue) Open Source Software License Copyright 2009-2014 The Regents of +the University of Michigan All rights reserved. + +HOOMD-blue may contain modifications (Contributions) provided, and to which +copyright is held, by various Contributors who have granted The Regents of the +University of Michigan the right to modify and/or distribute such Contributions. + +You may redistribute, use, and create derivate works of HOOMD-blue, in source +and binary forms, provided you abide by the following conditions: + +* Redistributions of source code must retain the above copyright notice, this +list of conditions, and the following disclaimer both in the code and +prominently in any materials provided with the distribution. + +* Redistributions in binary form must reproduce the above copyright notice, this +list of conditions, and the following disclaimer in the documentation and/or +other materials provided with the distribution. + +* All publications and presentations based on HOOMD-blue, including any reports +or published results obtained, in whole or in part, with HOOMD-blue, will +acknowledge its use according to the terms posted at the time of submission on: +http://codeblue.umich.edu/hoomd-blue/citations.html + +* Any electronic documents citing HOOMD-Blue will link to the HOOMD-Blue website: +http://codeblue.umich.edu/hoomd-blue/ + +* Apart from the above required attributions, neither the name of the copyright +holder nor the names of HOOMD-blue's contributors may be used to endorse or +promote products derived from this software without specific prior written +permission. + +Disclaimer + +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER AND CONTRIBUTORS ``AS IS'' AND +ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED +WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, AND/OR ANY +WARRANTIES THAT THIS SOFTWARE IS FREE OF INFRINGEMENT ARE DISCLAIMED. + +IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, +INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, +BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, +DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF +LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE +OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF +ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: b430ae07a16aebc6323f25d820d585fcd0d131f2 Author: Justin Lecher jlec AT gentoo DOT org AuthorDate: Tue Feb 10 13:38:53 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Tue Feb 10 13:38:53 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=b430ae07 New license Signed-off-by: Justin Lecher jlec AT gentoo.org --- licenses/XPLOR-NIH | 37 + 1 file changed, 37 insertions(+) diff --git a/licenses/XPLOR-NIH b/licenses/XPLOR-NIH new file mode 100644 index 000..5465e23 --- /dev/null +++ b/licenses/XPLOR-NIH @@ -0,0 +1,37 @@ +LICENSE FOR NON-PROFIT INSTITUTIONS TO USE XPLOR-NIH + + Terms of Agreement + +By downloading or using the Xplor-NIH software you agree to the +following terms: + +- You shall not use the software for any purpose (research or + otherwise) that is supported by a for profit organization without + prior written authorization. + +- You agree that the software is furnished on an as is basis and + that the authors in no way warrant the software or any of its + results and is in no way liable for any use you make of the software. + +- Ownership of software and documentation is retained by the + appropriate, respective organizations. + +- You shall not disclose in any form either the delivered software or + documentation to third parties without prior written authorization. + + +In addition, we request that you adhere to the following practices: + +- Please report modifications and additions to the software back to + the Xplor-NIH authors. We would like the modified source code and a + test script, such that we can include the modifications in future + versions of the software. + +- In reports or publication of results obtained using Xplor-NIH, + please acknowledge use of the software by citing the article: + + +C.D. Schwieters, J.J. Kuszewski, N. Tjandra, G.M. Clore, ``The +Xplor-NIH NMR Molecular Structure Determination Package,'' +J. Magn. Res., 160, 66-74 (2003). +
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 48b0dbc4ee55f16c0f3e17a8572be3488d1ddff2 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Mon Jan 26 07:30:43 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Mon Jan 26 07:30:43 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=48b0dbc4 Moved to tree Bug 536656 --- licenses/Mendeley-terms | 220 1 file changed, 220 deletions(-) diff --git a/licenses/Mendeley-terms b/licenses/Mendeley-terms deleted file mode 100644 index e4e3e32..000 --- a/licenses/Mendeley-terms +++ /dev/null @@ -1,220 +0,0 @@ -TERMS OF USE - -These terms (“Terms of Use”) apply to the use of our website at http://www.mendeley.com (the Site), and our software (the Software) downloaded from the Site (collectively, the “Services”). Please read these Terms of Use carefully before you start to use the Services. These Terms of Use include the Site’s privacy policy, Copyright and Intellectual Property Policy and any additional terms or product requirements applicable to the Services you use. By using our Services, you are agreeing to these Terms of Use. - -We may revise these Terms of Use at any time by amending this page. You are expected to check this page from time to time to take notice of any changes we make, as they are binding on you. - - -1. INFORMATION ABOUT US - -1.1. The Services are provided by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at White Bear Yard, 144a Clerkenwell Road, London, EC1R 5DF, United Kingdom. Our VAT number is 494 6272 12. - - -2. PURPOSE - -2.1. The principal purposes of the Services are to: - -2.1.1. assist you in the cataloguing and managing of your academic papers and articles (Academic Papers); - -2.1.2. share your academic and scientific knowledge with selected colleagues; - -2.1.3. discover academic knowledge and enable detailed search of academic papers; - -2.1.4. put you in touch with like-minded people and facilitate research projects; - -2.1.5. provide data and analytics to help monitor, guide and facilitate the research being undertaken across your institution. - - -3. ACCESSING OUR SITE - -3.1. We restrict access to certain parts of our Site to users who have registered with us. If you register with us, you must provide true and accurate information about yourself. Should the registration information provided prove false or misleading (including your personal details), we may suspend or terminate your account. - -3.2. We restrict access to the Mendeley Institutional Edition portion of our Site to users who are covered by their institution’s license agreement granting such access, if any. If you are covered by such license agreement, additional terms detailed therein govern your use of the Services. - -3.3. If you choose a password or any other piece of information as part of our security procedures, you must take reasonable steps to keep such information confidential and secure, and you must not disclose it to any third party. We have the right to disable any account or password, if in our reasonable opinion, your account information has been compromised. You must tell us immediately if you become aware of or suspect any unauthorised use of your account or access to your password. - - -4. OUR SOFTWARE - -4.1. We hereby grant to you a non-exclusive, personal, non-transferable license, in accordance with these Terms of Use, to: - -4.1.1. download, install and use the Software for the purposes of cataloguing and managing your Academic Papers, including making a back-up copy of your Academic Papers; - -4.1.2. distribute the Software so that other users may install and use the Software for the purposes of cataloguing and managing their Academic Papers; and - -4.1.3. make a copy of the Software for back-up purposes. - -4.2. When you download our Software and connect it to a Mendeley web account by entering your account details, our Software collects (even while you are offline) certain data which is uploaded to our servers when you synchronize your Software and Mendeley web account, specifically, data relating to: - -4.2.1. Academic Papers such as the author name, title and keywords for the purpose of assisting in the: - - -cataloguing of your and other user's Academic Papers; -indexing of academic articles and materials; -searching of the indexed academic articles and materials; -improving the document recognition process for all users; - -4.2.2. reading, cataloguing and accessing your Academic Papers for the purpose of: - - -generating recommendations for you including articles that you may be interested in reading and these recommendations are displayed in your private account; -preparing individualized
[gentoo-commits] proj/sci:master commit in: licenses/
commit: ecff795f29bddd104ddeec70e7801d3a8fce769e Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Wed Jan 14 09:48:02 2015 + Commit: Christoph Junghans ottxor AT gentoo DOT org CommitDate: Wed Jan 14 09:48:02 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=ecff795f Add updated NVIDIA-CUDA license --- licenses/NVIDIA-CUDA | 2262 ++ 1 file changed, 2262 insertions(+) diff --git a/licenses/NVIDIA-CUDA b/licenses/NVIDIA-CUDA new file mode 100644 index 000..44b5705 --- /dev/null +++ b/licenses/NVIDIA-CUDA @@ -0,0 +1,2262 @@ +End User License Agreement +-- + + +Preface +--- + +The following contains specific license terms and conditions +for four separate NVIDIA products. By accepting this +agreement, you agree to comply with all the terms and +conditions applicable to the specific product(s) included +herein. + + +NVIDIA CUDA Toolkit + + +Description + +The NVIDIA CUDA Toolkit provides command-line and graphical +tools for building, debugging and optimizing the performance +of applications accelerated by NVIDIA GPUs, runtime and math +libraries, and documentation including programming guides, +user manuals, and API references. The NVIDIA CUDA Toolkit +License Agreement is available in Chapter 1. + + +Default Install Location of CUDA Toolkit + +Windows platform: + +%ProgramFiles%\NVIDIA GPU Computing Toolkit\CUDA\v#.# + +Linux platform: + +/usr/local/cuda-#.# + +Mac platform: + +/Developer/NVIDIA/CUDA-#.# + + +NVIDIA CUDA Samples + + +Description + +This package includes over 100+ CUDA examples that demonstrate +various CUDA programming principles, and efficient CUDA +implementation of algorithms in specific application domains. +The NVIDIA CUDA Samples License Agreement is available in +Chapter 2. + + +Default Install Location of CUDA Samples + +Windows platform: + +%ProgramData%\NVIDIA Corporation\CUDA Samples\v#.# + +Linux platform: + +/usr/local/cuda-#.#/samples + +and + +$HOME/NVIDIA_CUDA-#.#_Samples + +Mac platform: + +/Developer/NVIDIA/CUDA-#.#/samples + + +NVIDIA Driver + + +Description + +This package contains the operating system driver and +fundamental system software components for NVIDIA GPUs. The +NVIDIA Driver License for the Windows platform is available in +Chapter 3, and the NVIDIA Driver License for the Linux and Mac +OSX platforms is available in Chapter 4. + + +NVIDIA Nsight Visual Studio Edition (Windows only) + + +Description + +NVIDIA Nsight Development Platform, Visual Studio Edition is a +development environment integrated into Microsoft Visual +Studio that provides tools for debugging, profiling, analyzing +and optimizing your GPU computing and graphics applications. +The NVIDIA Nsight Visual Studio Edition License Agreement is +available in Chapter 5. + + +Default Install Location of Nsight Visual Studio Edition + +Windows platform: + +%ProgramFiles%\NVIDIA Corporation\Nsight Visual Studio Edition #.# + + +NVIDIA CUDA General Terms + + +Description + +General terms that apply to all of the software components are +available in Chapter 6. + + +1. NVIDIA CUDA Toolkit License Agreement + + + +Important Notice + + +READ CAREFULLY: This Software License Agreement (Agreement) +for NVIDIA CUDA Toolkit, including computer software and +associated documentation (Software), is the Agreement which +governs use of the SOFTWARE of NVIDIA Corporation and its +subsidiaries (NVIDIA) downloadable herefrom. By downloading, +installing, copying, or otherwise using the SOFTWARE, You (as +defined below) agree to be bound by the terms of this +Agreement. If You do not agree to the terms of this Agreement, +do not download the SOFTWARE. + + +Recitals + + +Use of NVIDIA's SOFTWARE requires three elements: the +SOFTWARE, an NVIDIA GPU or application processor (NVIDIA +Hardware), and a computer system. The SOFTWARE is protected +by copyright laws and international copyright treaties, as +well as other intellectual property laws and treaties. The +SOFTWARE is not sold, and instead is only licensed for Your +use, strictly in accordance with this Agreement. The NVIDIA +Hardware is protected by various patents, and is sold, but +this Agreement does not cover the sale or use of such +hardware, since it may not necessarily be sold as a package +with the SOFTWARE. This Agreement sets forth the terms and +conditions of the SOFTWARE only. + + +1.1. Definitions + + +1.1.1. Licensee + +You, or Your shall mean the entity or individual that +downloads and uses the SOFTWARE. + + +1.1.2. Redistributable Software + +Redistributable Software shall mean the redistributable +libraries referenced in Attachment A of this Agreement. + + +1.1.3. Software + +SOFTWARE shall mean the deliverables provided pursuant to +this Agreement. SOFTWARE may be provided in either source or +binary form, at NVIDIA's discretion. +
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 49e5b66d51acc34b71764dc65379c6764d427af8 Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Tue Jan 13 16:22:39 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Thu Jan 15 06:52:56 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=49e5b66d Update Mendeley-terms --- licenses/Mendeley-terms | 234 1 file changed, 95 insertions(+), 139 deletions(-) diff --git a/licenses/Mendeley-terms b/licenses/Mendeley-terms index a3c5fd7..e4e3e32 100644 --- a/licenses/Mendeley-terms +++ b/licenses/Mendeley-terms @@ -1,15 +1,18 @@ TERMS OF USE -This page (together with the documents referred to on it) tells you the terms on which you may make use of our website www.mendeley.com (our Site) and our software (our Software), whether as a user or a registered member. Please read these Terms of Use carefully before you start to use the Site and the Software. By using our Site and our Software, you indicate that you accept these Terms of Use and that you agree to abide by them. If you do not agree to these Terms of Use, please refrain from using our Site and our Software. +These terms (“Terms of Use”) apply to the use of our website at http://www.mendeley.com (the Site), and our software (the Software) downloaded from the Site (collectively, the “Services”). Please read these Terms of Use carefully before you start to use the Services. These Terms of Use include the Site’s privacy policy, Copyright and Intellectual Property Policy and any additional terms or product requirements applicable to the Services you use. By using our Services, you are agreeing to these Terms of Use. + +We may revise these Terms of Use at any time by amending this page. You are expected to check this page from time to time to take notice of any changes we make, as they are binding on you. 1. INFORMATION ABOUT US -1.1. www.mendeley.com is a site operated by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at Second Floor, Cardiff House, Tilling Road, London NW2 1LJ. Our VAT number is 930 1117 75. +1.1. The Services are provided by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at White Bear Yard, 144a Clerkenwell Road, London, EC1R 5DF, United Kingdom. Our VAT number is 494 6272 12. + 2. PURPOSE -2.1. The principal purposes of the Site are to: +2.1. The principal purposes of the Services are to: 2.1.1. assist you in the cataloguing and managing of your academic papers and articles (Academic Papers); @@ -17,67 +20,58 @@ This page (together with the documents referred to on it) tells you the terms on 2.1.3. discover academic knowledge and enable detailed search of academic papers; -2.1.4. put you in touch with like-minded people and facilitate research projects. - -3. ACCESSING OUR SITE - -3.1. Although we aim to keep the Site available at all reasonable times, we may withdraw, suspend or amend the service we provide on our Site without notice including, for example, in the event of technical failures, upgrades, routine or emergency repair work or some reason outside our control. We will not be liable if for any reason our Site is unavailable at any time or for any period. - -3.2. We restrict access to certain parts of our Site to users who have registered with us. If you register with us, you must provide true and accurate information about yourself. Should the registration information provided prove false or misleading (including your personal details), we may suspend or terminate your account. +2.1.4. put you in touch with like-minded people and facilitate research projects; -3.3. If you choose a password or any other piece of information as part of our security procedures, you must treat such information as confidential, and you must not disclose it to any third party. We have the right to disable any account or password, if in our reasonable opinion, your account information has been compromised. You must tell us immediately if you suspect any unauthorised use of your account or access to your password. You are solely responsible for any and all use of your account. +2.1.5. provide data and analytics to help monitor, guide and facilitate the research being undertaken across your institution. -4. OUR SOFTWARE - EULA - -4.1. We allow you to download our proprietary software (including any updates to the software that we may make available from time to time) from the Site (our Software) or obtain the Software from our users for the purposes of cataloguing and managing your Academic Papers. +3. ACCESSING OUR SITE -4.2. By proceeding to download and install our Software (or any updates to the Software that we may make available
[gentoo-commits] proj/sci:master commit in: licenses/, sci-misc/mendeleydesktop/
commit: 8ae9c3a9c5ce81b18d2cea72f40d3f75eaa0468b Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Tue Jan 13 16:14:15 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Thu Jan 15 06:52:56 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8ae9c3a9 sci-misc/mendeleydesktop: Add version bumped ebuild --- licenses/Mendeley-EULA | 264 + sci-misc/mendeleydesktop/ChangeLog | 8 + .../mendeleydesktop/mendeleydesktop-1.13.ebuild| 114 + sci-misc/mendeleydesktop/metadata.xml | 9 + 4 files changed, 395 insertions(+) diff --git a/licenses/Mendeley-EULA b/licenses/Mendeley-EULA new file mode 100644 index 000..a3c5fd7 --- /dev/null +++ b/licenses/Mendeley-EULA @@ -0,0 +1,264 @@ +TERMS OF USE + +This page (together with the documents referred to on it) tells you the terms on which you may make use of our website www.mendeley.com (our Site) and our software (our Software), whether as a user or a registered member. Please read these Terms of Use carefully before you start to use the Site and the Software. By using our Site and our Software, you indicate that you accept these Terms of Use and that you agree to abide by them. If you do not agree to these Terms of Use, please refrain from using our Site and our Software. + + +1. INFORMATION ABOUT US + +1.1. www.mendeley.com is a site operated by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at Second Floor, Cardiff House, Tilling Road, London NW2 1LJ. Our VAT number is 930 1117 75. + +2. PURPOSE + +2.1. The principal purposes of the Site are to: + +2.1.1. assist you in the cataloguing and managing of your academic papers and articles (Academic Papers); + +2.1.2. share your academic and scientific knowledge with selected colleagues; + +2.1.3. discover academic knowledge and enable detailed search of academic papers; + +2.1.4. put you in touch with like-minded people and facilitate research projects. + +3. ACCESSING OUR SITE + +3.1. Although we aim to keep the Site available at all reasonable times, we may withdraw, suspend or amend the service we provide on our Site without notice including, for example, in the event of technical failures, upgrades, routine or emergency repair work or some reason outside our control. We will not be liable if for any reason our Site is unavailable at any time or for any period. + +3.2. We restrict access to certain parts of our Site to users who have registered with us. If you register with us, you must provide true and accurate information about yourself. Should the registration information provided prove false or misleading (including your personal details), we may suspend or terminate your account. + +3.3. If you choose a password or any other piece of information as part of our security procedures, you must treat such information as confidential, and you must not disclose it to any third party. We have the right to disable any account or password, if in our reasonable opinion, your account information has been compromised. You must tell us immediately if you suspect any unauthorised use of your account or access to your password. You are solely responsible for any and all use of your account. + + +4. OUR SOFTWARE - EULA + +4.1. We allow you to download our proprietary software (including any updates to the software that we may make available from time to time) from the Site (our Software) or obtain the Software from our users for the purposes of cataloguing and managing your Academic Papers. + +4.2. By proceeding to download and install our Software (or any updates to the Software that we may make available from time to time), you agree to the terms of this EULA and these Terms of Use and your use of such Software (including any updates) will be in accordance with this EULA and these Terms of Use. If you do not agree to these, we are unwilling to license our Software to you. In this case, you may not download or install our Software and you must discontinue the downloading or installation process. + +4.3. If you choose to download and install our Software and connect it to a Mendeley Web account by entering your account details, our Software collects (even while you are offline) certain data which is uploaded to our servers when you synchronize your Software and Mendeley Web account. We collect data relating to your: + +4.3.1. Academic Papers such as the author name, title and keywords for the purpose of assisting in the: + * cataloguing of your and other user's Academic Papers; + * indexing of academic articles and materials; + * searching of the indexed academic articles and materials; + * improving the document recognition process for all users; + +4.3.2. reading, cataloguing
[gentoo-commits] proj/sci:master commit in: licenses/, sci-biology/trans-abyss/
commit: 9ad55d55245564b9b3b2f7d6592dbdee7678ea4d Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Sat Jan 10 14:35:20 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Sat Jan 10 14:35:20 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9ad55d55 sci-biology/trans-abys: Fix license and keywords --- licenses/bcca_2010 | 453 +++ sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild | 5 +- 2 files changed, 456 insertions(+), 2 deletions(-) diff --git a/licenses/bcca_2010 b/licenses/bcca_2010 new file mode 100644 index 000..c8874f8 --- /dev/null +++ b/licenses/bcca_2010 @@ -0,0 +1,453 @@ +BC CANCER AGENCY SOFTWARE LICENSE AGREEMENT (ACADEMIC USE) + +CAREFULLY READ THE FOLLOWING TERMS AND CONDITIONS. This License + +Agreement (the Agreement) is a legal contract between you, your + +employer, educational institution or organization (collectively, You) + +and the British Columbia Cancer Agency (BCCA) with respect to the + +license of the software, including all associated documentation + +(collectively, the Product). + + + +BCCA is willing to license the Product to You only if You accept the + +terms and conditions of this Agreement. By clicking on the I ACCEPT + +button, or by copying, downloading, accessing or otherwise using the + +Product, You automatically agree to be bound by the terms of this + +Agreement. IF YOU DO NOT WISH TO BE BOUND BY THE TERMS OF THIS + +AGREEMENT, DO NOT COPY, DOWNLOAD, ACCESS OR OTHERWISE USE THE + +PRODUCT. + + + +1. AUTHORITY: In the event that You are an educational institution or + +organization, Your representative who is clicking the I ACCEPT + +button, or otherwise copying, downloading, accessing or using the + +Product hereby, in their personal capacity, represents and warrants + +that they possess the legal authority to enter into this Agreement + +on Your behalf and to bind You to the terms of this Agreement. + + + +2. LICENSE TO USE: BCCA hereby grants to You a personal, non-exclusive, + +non-transferable, limited license to use the Product solely for + +internal, non-commercial use for non-profit research or educational + +purposes only on the terms and conditions contained in this Agreement. + +The Product may be installed at a single site at Your premises only. A + +copy of the Product installed on a single common machine or cluster of + +machines may be shared for internal use by Qualified Users only. In + +order to be a Qualified User, an individual must be a student, + +researcher, professor, instructor or staff member of a non-profit + +educational institution or organization who uses the Product solely for + +non-profit research or educational purposes. + + + +3. RESTRICTIONS: You acknowledge and agree that You shall not, and + +shall not authorize any third party to: + +(a) make copies of the Product, except as provided in Section 2 and + +except for a single backup copy, and any such copy together with the + +original must be kept in Your possession or control; + +(b) modify, adapt, decompile, disassemble, translate into another + +computer language, create derivative works of, or otherwise reverse + +engineer the Product, or disclose any trade secrets relating to the + +Product, except as permitted in Section 5; + +(c) license, sublicense, distribute, sell, lease, transfer, assign, + +trade, rent or publish the Product or any part thereof and/or copies + +thereof, to any third party; + +(d) use the Product to process any data other than Your own; + +(e) use the Product or any part thereof for any commercial or + +for-profit purpose or any other purpose other than as permitted in + +Section 2; or + +(f) use, without its express permission, the name of BCCA. + + + +4. INTELLECTUAL PROPERTY RIGHTS: Subject to Section 5 below, all + +patents, copyrights, trade secrets, service marks, trademarks and + +other proprietary rights in or related to the Product and any + +improvements, modifications and enhancements thereof are and will + +remain the exclusive property of BCCA or its licensors. You agree + +that You will not, either during or after the termination of this + +Agreement, contest or challenge the title to or the intellectual + +property rights of BCCA or its licensors in the Product or any + +portion thereof. + + + +5. OWNERSHIP OF IMPROVEMENTS: In the event that the Product, in the + +form provided to You, includes source code (the Source Code), + +You are entitled to make improvements, modifications and + +enhancements to the Source Code (collectively, Improvements) + +which Improvements are to be used by You for non-profit research + +and educational purposes only and You shall be the owner of those + +Improvements that You directly make and of all intellectual + +property rights to such Improvements, subject to the foregoing + +limits on Your use and distribution of such Improvements. You + +hereby grant to
[gentoo-commits] proj/sci:master commit in: licenses/
commit: d9d17ad1c57f74022eae6ec679e0afeac044a89e Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Fri Jan 9 11:59:47 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Fri Jan 9 11:59:47 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d9d17ad1 Remove Mendeley-EULA (mendeleydesktop was moved to tree) --- licenses/Mendeley-EULA | 264 - 1 file changed, 264 deletions(-) diff --git a/licenses/Mendeley-EULA b/licenses/Mendeley-EULA deleted file mode 100644 index a3c5fd7..000 --- a/licenses/Mendeley-EULA +++ /dev/null @@ -1,264 +0,0 @@ -TERMS OF USE - -This page (together with the documents referred to on it) tells you the terms on which you may make use of our website www.mendeley.com (our Site) and our software (our Software), whether as a user or a registered member. Please read these Terms of Use carefully before you start to use the Site and the Software. By using our Site and our Software, you indicate that you accept these Terms of Use and that you agree to abide by them. If you do not agree to these Terms of Use, please refrain from using our Site and our Software. - - -1. INFORMATION ABOUT US - -1.1. www.mendeley.com is a site operated by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at Second Floor, Cardiff House, Tilling Road, London NW2 1LJ. Our VAT number is 930 1117 75. - -2. PURPOSE - -2.1. The principal purposes of the Site are to: - -2.1.1. assist you in the cataloguing and managing of your academic papers and articles (Academic Papers); - -2.1.2. share your academic and scientific knowledge with selected colleagues; - -2.1.3. discover academic knowledge and enable detailed search of academic papers; - -2.1.4. put you in touch with like-minded people and facilitate research projects. - -3. ACCESSING OUR SITE - -3.1. Although we aim to keep the Site available at all reasonable times, we may withdraw, suspend or amend the service we provide on our Site without notice including, for example, in the event of technical failures, upgrades, routine or emergency repair work or some reason outside our control. We will not be liable if for any reason our Site is unavailable at any time or for any period. - -3.2. We restrict access to certain parts of our Site to users who have registered with us. If you register with us, you must provide true and accurate information about yourself. Should the registration information provided prove false or misleading (including your personal details), we may suspend or terminate your account. - -3.3. If you choose a password or any other piece of information as part of our security procedures, you must treat such information as confidential, and you must not disclose it to any third party. We have the right to disable any account or password, if in our reasonable opinion, your account information has been compromised. You must tell us immediately if you suspect any unauthorised use of your account or access to your password. You are solely responsible for any and all use of your account. - - -4. OUR SOFTWARE - EULA - -4.1. We allow you to download our proprietary software (including any updates to the software that we may make available from time to time) from the Site (our Software) or obtain the Software from our users for the purposes of cataloguing and managing your Academic Papers. - -4.2. By proceeding to download and install our Software (or any updates to the Software that we may make available from time to time), you agree to the terms of this EULA and these Terms of Use and your use of such Software (including any updates) will be in accordance with this EULA and these Terms of Use. If you do not agree to these, we are unwilling to license our Software to you. In this case, you may not download or install our Software and you must discontinue the downloading or installation process. - -4.3. If you choose to download and install our Software and connect it to a Mendeley Web account by entering your account details, our Software collects (even while you are offline) certain data which is uploaded to our servers when you synchronize your Software and Mendeley Web account. We collect data relating to your: - -4.3.1. Academic Papers such as the author name, title and keywords for the purpose of assisting in the: - * cataloguing of your and other user's Academic Papers; - * indexing of academic articles and materials; - * searching of the indexed academic articles and materials; - * improving the document recognition process for all users; - -4.3.2. reading, cataloguing and accessing your Academic Papers for the purpose of: - * generating recommendations for you including articles that you may be interested in reading and these recommendations are
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 70b93150b6a87d4ce06af8327c66f417e1c628d3 Author: Justin Lecher jlec AT gentoo DOT org AuthorDate: Sat Jan 10 13:46:38 2015 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Sat Jan 10 13:46:38 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=70b93150 New license Signed-off-by: Justin Lecher jlec AT gentoo.org --- licenses/ATLAS | 48 1 file changed, 48 insertions(+) diff --git a/licenses/ATLAS b/licenses/ATLAS new file mode 100644 index 000..e6f11a8 --- /dev/null +++ b/licenses/ATLAS @@ -0,0 +1,48 @@ +NON-COMMERCIAL LICENSE AGREEMENT + +This Non-commercial License Agreement (Agreement) has been adopted for use by Baylor College of Medicine (BCM), a Texas non-profit corporation, for the licensing of software programs for use for internal research purposes only by individuals or employees of an academic institution or private company. + + 1.DEFINITIONS + + 1.1 The term Licensed Code shall mean the software entitled Atlas Whole Genome Assembly Suite, developed +by (in alphabetical order): Rui Chen, James Durbin, Amy Egan, Paul Havlak, and Yanru Ren (collectively the Authors), employees of BCM. + + 2.GRANT OF LICENSE + + 2.1 BCM hereby grants to you, or the corporation or institution you represent, identified in the above form (LICENSEE), a non-exclusive and non-transferable, right and license to use, modify, prepare derivative works of and execute solely for internal, research (non-commercial) purposes, the Licensed Code. This license shall be for use only by the LICENSEE only at the site (physical address) where the code is downloaded. The foregoing license does not include the right to copy the Licensed Code, or portions thereof, to another site for any reason. + + 2.2 LICENSEE acknowledges that the Licensed Code, including, but not limited to, all rights under federal copyright laws, are and shall remain at all times the exclusive property of BCM. Any modifications or derivative works based on the Licensed Code are and shall be considered part of the Licensed Code and ownership thereof is retained by or vested in BCM. LICENSEE shall provide to BCM reports of such modifications or derivative works and such modifications or derivative works shall be made available to BCM upon receipt of a written request for such from BCM. + + 2.3 LICENSEE shall not distribute or transfer the Licensed Code, or any portion thereof, to any other company, +institution or individual without the prior written permission of BCM. + + 3.NO UPGRADES/NO SERVICE/DELIVERED AS IS + + 3.1 It is expressly understood and agreed that the Licensed Code and Manuals will be delivered to LICENSEE on as AS IS basis as of the Agreement Date and that neither BCM nor the Authors will be responsible for future support of the Licensed Code. + + 3.2 LICENSEE acknowledges that LICENSEE will not be entitled to any Licensed Code upgrades and that BCM will not provide maintenance for the Licensed Code. If LICENSEE finds defects, bugs, in the Licensed Code, LICENSEE shall notify BCM of the existence of the bugs. Neither BCM nor the Authors shall, however, have any obligation to fix any bugs in the Licensed Code. + + 4.DISCLAIMER OF WARRANTY + + BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, WARRANTIES OF FITNESS OR MERCHANTABILITY, REGARDING OR WITH RESPECT TO THE LICENSED CODE. BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, OF THE PATENTABILITY OR COPYRIGHTABILITY OF ANY OF THE LICENSED CODE OR OF THE ENFORCEABILITY OF ANY PATENTS OR COPYRIGHTS ISSUING THEREUPON, IF ANY, OR THAT THE LICENSED CODE, IS OR SHALL BE FREE FROM INFRINGEMENT OF ANY PATENT, COPYRIGHT OR OTHER RIGHTS OF THIRD PARTIES. BCM MAKES NO WARRANTIES OR REPRESENTATIONS, EXPRESS OR IMPLIED, THAT THE LICENSED CODE SATISFIES REGULATORY REQUIREMENTS. LICENSEE ACKNOWLEDGE THAT THE LICENSED CODE IS BEING LICENSED AS IS. BCM HAS NOT TESTED THE LICENSED CODE FOR VIRUSES OR OTHER DEFECTS NOR HAS BCM COMPLETED TESTING THE LICENSED CODE. + + 5.LIMITATION OF DAMAGES + + BCM shall not be liable for any monetary damages whatsoever with respect to LICENSEE's use of the Licensed Code nor shall BCM be liable for any special, indirect, incidental or consequential damages arising out of or related to this Agreement, even if BCM is advised of such damages. + + 6.INDEMNIFICATION + + LICENSEE will indemnify and hold BCM, BCM's trustees, officers, agents, employees, students, persons holding academic appointments within BCM, and affiliated hospitals (the Indemnified parties) harmless from and against any and all claims, causes of action or lawsuits for personal injury (including death), property damage, and any other losses of any nature together with related expenses (including attorney's fees) made against the Indemnified parties resulting directly or indirectly from the
[gentoo-commits] proj/sci:master commit in: licenses/, sci-libs/arrayfire/files/, sci-libs/arrayfire/
commit: 2ff76f8d81a107b07bb43fd653d73bf549aae016
Author: Marius Brehler marbre AT linux DOT sungazer DOT de
AuthorDate: Fri Jan 9 17:32:31 2015 +
Commit: Justin Lecher jlec AT gentoo DOT org
CommitDate: Fri Jan 9 17:32:31 2015 +
URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2ff76f8d
New package arrayfire
---
licenses/ArrayFire | 27 +
sci-libs/arrayfire/arrayfire-.ebuild | 96
sci-libs/arrayfire/files/FindCBLAS.patch | 48
sci-libs/arrayfire/metadata.xml | 17 ++
4 files changed, 188 insertions(+)
diff --git a/licenses/ArrayFire b/licenses/ArrayFire
new file mode 100644
index 000..3aae2e6
--- /dev/null
+++ b/licenses/ArrayFire
@@ -0,0 +1,27 @@
+Copyright (c) 2014, ArrayFire
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
modification,
+are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+ list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
this
+ list of conditions and the following disclaimer in the documentation and/or
+ other materials provided with the distribution.
+
+* Neither the name of the ArrayFire nor the names of its
+ contributors may be used to endorse or promote products derived from
+ this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS IS AND
+ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
FOR
+ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
diff --git a/sci-libs/arrayfire/arrayfire-.ebuild
b/sci-libs/arrayfire/arrayfire-.ebuild
new file mode 100644
index 000..06295ca
--- /dev/null
+++ b/sci-libs/arrayfire/arrayfire-.ebuild
@@ -0,0 +1,96 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit cmake-utils eutils git-r3 toolchain-funcs
+
+DESCRIPTION=A general purpose GPU library.
+HOMEPAGE=http://www.arrayfire.com/;
+EGIT_REPO_URI=https://github.com/arrayfire/arrayfire.git;
+KEYWORDS=~amd64
+
+LICENSE=ArrayFire
+SLOT=0
+IUSE=+examples +cpu cuda
+
+RDEPEND=
+ =sys-devel/gcc-4.7.3-r1
+ virtual/blas
+ virtual/cblas
+ cuda? ( =dev-util/nvidia-cuda-toolkit-6.0 )
+ sci-libs/fftw:3.0
+DEPEND=${RDEPEND}
+
+# We need write acccess /dev/nvidiactl, /dev/nvidia0 and /dev/nvidia-uvm and
the portage
+# user is (usually) not in the video group
+if use cuda; then
+ RESTRICT=userpriv
+fi
+
+S=${WORKDIR}/${P}
+
+QA_PREBUILT=/usr/share/arrayfire/examples/helloworld_cpu
+ /usr/share/arrayfire/examples/pi_cpu
+ /usr/share/arrayfire/examples/vectorize_cpu
+ /usr/share/arrayfire/examples/helloworld_cuda
+ /usr/share/arrayfire/examples/pi_cuda
+ /usr/share/arrayfire/examples/vectorize_cuda
+
+src_unpack() {
+ git-r3_src_unpack
+}
+
+src_prepare() {
+ if use cpu; then
+ epatch ${FILESDIR}/FindCBLAS.patch
+ fi
+ cmake-utils_src_prepare
+}
+
+src_configure() {
+ if use cuda; then
+ addwrite /dev/nvidiactl
+ addwrite /dev/nvidia0
+ addwrite /dev/nvidia-uvm
+ fi
+
+ local mycmakeargs=
+ -DCMAKE_BUILD_TYPE=Release
+ $(cmake-utils_use_build cpu CPU)
+ $(cmake-utils_use_build cuda CUDA)
+ -DBUILD_OPENCL=OFF
+ $(cmake-utils_use_build examples EXAMPLES)
+ -DBUILD_TEST=OFF
+
+
+ BUILD_DIR=${S}/build cmake-utils_src_configure
+}
+
+src_compile() {
+ BUILD_DIR=${S}/build cmake-utils_src_compile
+}
+
+src_install() {
+ cmake-utils_src_install
+
+ exeinto /usr/bin
+ doexe build/bin2cpp
+
+ if use examples; then
+ ebegin Installing examples
+ exeinto /usr/share/arrayfire/examples/
+ if use cpu; then
+ doexe build/examples/helloworld_cpu
+ doexe build/examples/pi_cpu
+ doexe build/examples/vectorize_cpu
+ fi
+ if use cuda; then
+ doexe
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 49de9fa6dab8a54e91794c9a4b72212d271247d4 Author: Martin Mokrejš mmokrejs AT fold DOT natur DOT cuni DOT cz AuthorDate: Thu Jan 8 23:18:13 2015 + Commit: Martin Mokrejs mmokrejs AT fold DOT natur DOT cuni DOT cz CommitDate: Thu Jan 8 23:18:13 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=49de9fa6 new license --- licenses/BSD-BroadInstitute | 17 + 1 file changed, 17 insertions(+) diff --git a/licenses/BSD-BroadInstitute b/licenses/BSD-BroadInstitute new file mode 100644 index 000..d9fe246 --- /dev/null +++ b/licenses/BSD-BroadInstitute @@ -0,0 +1,17 @@ +Copyright (c) 2012, The Broad Institute, Inc. All rights reserved. + +Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: + +· Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. + +· Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. + +· Neither the name of the Broad Institute nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.** + +THIS SOFTWARE IS PROVIDED BY THE BROAD INSTITUTE ''AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, +THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE BROAD INSTITUTE +BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES(INCLUDING, BUT NOT LIMITED TO, +PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, +WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, +EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 51914e3305d2364a930d6baa6ef7ce2663621c19 Author: Martin Mokrejš mmokrejs AT fold DOT natur DOT cuni DOT cz AuthorDate: Wed Jan 7 21:35:20 2015 + Commit: Martin Mokrejs mmokrejs AT fold DOT natur DOT cuni DOT cz CommitDate: Wed Jan 7 21:35:20 2015 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=51914e33 update Tablet license --- licenses/Tablet | 38 ++ 1 file changed, 6 insertions(+), 32 deletions(-) diff --git a/licenses/Tablet b/licenses/Tablet index d81931a..296b09c 100644 --- a/licenses/Tablet +++ b/licenses/Tablet @@ -1,36 +1,10 @@ - Tablet uses a modified version of the [1]BSD License which has been - edited to remove references to distribution and use in source forms. - This means that we are happy for you to distribute and use Tablet - however you please, but we do not (yet) want to make the source code - publicly available. +Copyright (c) 2009-2014, Information Computational Sciences, The James Hutton Institute. +All rights reserved. - The licence and copyright for Tablet is as follows: +Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: - Copyright © 2009-2013, Information Computational Sciences, JHI. - All rights reserved. +1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. - Redistribution and use in binary form, without modification, is - permitted provided that the following conditions are met: +2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. - - Redistributions must reproduce the above copyright notice, this list - of conditions and the following disclaimer in the documentation and/or - other materials provided with the distribution. - - Neither the name of The James Hutton Institute nor the names of its - contributors may be used to endorse or promote products derived from - this software without specific prior written permission. - - THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS AS - IS AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED - TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A - PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT - OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, - SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT - LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, - DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY - THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT - (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE - OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -References - - 1. http://opensource.org/licenses/bsd-license.html +THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS “AS IS” AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 256c5bec0cbe25cabcd27d76698ac1355df74a76 Author: Justin Lecher jlec AT gentoo DOT org AuthorDate: Wed Dec 17 13:04:08 2014 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Wed Dec 17 15:28:13 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=256c5bec Add atsas license Signed-off-by: Justin Lecher jlec AT gentoo.org --- licenses/atsas | 211 + 1 file changed, 211 insertions(+) diff --git a/licenses/atsas b/licenses/atsas new file mode 100644 index 000..16d0e70 --- /dev/null +++ b/licenses/atsas @@ -0,0 +1,211 @@ +ACADEMIC SOFTWARE LICENSE AGREEMENT FOR END-USERS AT PUBLIC FUNDED ACADEMIC, +EDUCATION OR RESEARCH INSTITUTIONS FOR THE USE OF ATSAS 2.6 + +By clicking the Acceptance button for the ATSAS 2.6 Software (Licensed +Software), you are consenting to be bound by and become a party to this +agreement as the Licensee. If you do not agree to all of the terms of +this agreement, you must not click the Acceptance button, not install +the product nor use the product, and you do not become a LICENSEE under +this agreement. + +If you are not a member of a public funded Academic and/or Education and/ +or Research Institution you must obtain a commercial license from EMBLEM +(i...@embl-em.de). + +This software license agreement is entered into by and between EMBL Enter- +prise Management GmbH (hereinafter EMBLEM) located at Boxberg Ring 107, +D-69126 Heidelberg, Germany and the LICENSEE. + +WHEREAS EMBLEM has the right to license all copyrights and other property +rights in the Licensed Software identified as ATSAS 2.6 and developed by +EMBL (European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 +Heidelberg, Germany), and EMBLEM desires to license the Software so that +it becomes available for public use and benefit. + +WHEREAS LICENSEE is a public funded Academic and/or Education and/or +Research Institution. + +WHEREAS LICENSEE desires to acquire a free non-exclusive license to use +the Software for internal research purposes only. + +NOW, THEREFORE, in consideration of the mutual promises and covenants +contained herein, the parties agree as follows: + +1. Definitions +Licensed Software means the current version 2.6 of the ATSAS computer +package developed by ATSAS team at EMBL-Hamburg, collectively the Authors, +pursuant to this Agreement. + +Any opinion, findings, conclusions or recommendations expressed in the +ATSAS 2.6 suite are those of the authors and do not necessarily reflect +the views of EMBL and EMBLEM. + +2. License +Subject to the terms and conditions of this Agreement a non-exclusive, +non-transferable License to use and copy the Licensed Software is made +available free of charge for the LICENSEE which is a non-profit educational, +academic and/or research institution. The License is only granted for +personal and internal use in research only at one Site, where a Site +is defined as a set of contiguous buildings in one location. The software +will be used at only one location of LICENSEE. + +This license does not entitle Licensee to receive from EMBLEM copies of +the Licensed software on disks, tapes or CD's, hard-copy documentation, +technical support, telephone assistance, or enhancements or updates to +the Licensed Software. + +The user and any research assistants, co-workers or other workers who may +use the Software agree to not give the source code to third parties or +grant licenses on software, which include the Software, alone or integrated +into other software, to third parties. Modification of the source code +is prohibited without the prior written consent of EMBLEM. + +3. Ownership +Except as expressly licensed in this Agreement, EMBL shall retain title to +the Licensed Software, and any upgrades and modifications created by EMBL. + +4. Consideration +In consideration for the license rights granted by EMBLEM, LICENSEE will +obtain this academic license free of charge. + +5. Copies +LICENSEE shall have the right to make copies of the Licensed Software for +internal use at the Site and for back-up purposes under this Agreement, +but agrees that all such copies shall contain the copyright notices and +all other reasonable and appropriate proprietary markings or confidential +legends that appear on the Licensed Software provided hereunder. + +6. Support +EMBLEM shall have no obligation to offer support services to LICENSEE, and +nothing contained herein shall be interpreted as to require EMBLEM to provide +maintenance, installation services, debugging, consultation or end-user +support of any kind. EMBLEM will provide any available updates for a period +of one year, without additional cost. + +7. Software Protection +LICENSEE acknowledges that the ATSAS Software is proprietary to EMBLEM. +The software code shall be treated as trade secrets and confidential +information of EMBLEM, and LICENSEE agrees to use best efforts to hold +the same in
[gentoo-commits] proj/sci:master commit in: licenses/, sci-misc/mendeleydesktop/, sci-misc/mendeleydesktop/files/
commit: a4bb5263692d9c90023146db09066102b040b65f Author: Marius Brehler marbre AT linux DOT sungazer DOT de AuthorDate: Wed Nov 19 09:04:27 2014 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Wed Nov 19 09:04:27 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a4bb5263 sci-misc/mendeleydesktop: add ebuild to overlay --- licenses/Mendeley-EULA | 264 + sci-misc/mendeleydesktop/ChangeLog | 12 + sci-misc/mendeleydesktop/files/mendeleydesktop | 4 + .../mendeleydesktop/mendeleydesktop-1.12.3.ebuild | 118 + sci-misc/mendeleydesktop/metadata.xml | 10 + 5 files changed, 408 insertions(+) diff --git a/licenses/Mendeley-EULA b/licenses/Mendeley-EULA new file mode 100644 index 000..a3c5fd7 --- /dev/null +++ b/licenses/Mendeley-EULA @@ -0,0 +1,264 @@ +TERMS OF USE + +This page (together with the documents referred to on it) tells you the terms on which you may make use of our website www.mendeley.com (our Site) and our software (our Software), whether as a user or a registered member. Please read these Terms of Use carefully before you start to use the Site and the Software. By using our Site and our Software, you indicate that you accept these Terms of Use and that you agree to abide by them. If you do not agree to these Terms of Use, please refrain from using our Site and our Software. + + +1. INFORMATION ABOUT US + +1.1. www.mendeley.com is a site operated by Mendeley Limited (we, us and our). We are registered in England and Wales under company number 6419015 and have our registered office at Second Floor, Cardiff House, Tilling Road, London NW2 1LJ. Our VAT number is 930 1117 75. + +2. PURPOSE + +2.1. The principal purposes of the Site are to: + +2.1.1. assist you in the cataloguing and managing of your academic papers and articles (Academic Papers); + +2.1.2. share your academic and scientific knowledge with selected colleagues; + +2.1.3. discover academic knowledge and enable detailed search of academic papers; + +2.1.4. put you in touch with like-minded people and facilitate research projects. + +3. ACCESSING OUR SITE + +3.1. Although we aim to keep the Site available at all reasonable times, we may withdraw, suspend or amend the service we provide on our Site without notice including, for example, in the event of technical failures, upgrades, routine or emergency repair work or some reason outside our control. We will not be liable if for any reason our Site is unavailable at any time or for any period. + +3.2. We restrict access to certain parts of our Site to users who have registered with us. If you register with us, you must provide true and accurate information about yourself. Should the registration information provided prove false or misleading (including your personal details), we may suspend or terminate your account. + +3.3. If you choose a password or any other piece of information as part of our security procedures, you must treat such information as confidential, and you must not disclose it to any third party. We have the right to disable any account or password, if in our reasonable opinion, your account information has been compromised. You must tell us immediately if you suspect any unauthorised use of your account or access to your password. You are solely responsible for any and all use of your account. + + +4. OUR SOFTWARE - EULA + +4.1. We allow you to download our proprietary software (including any updates to the software that we may make available from time to time) from the Site (our Software) or obtain the Software from our users for the purposes of cataloguing and managing your Academic Papers. + +4.2. By proceeding to download and install our Software (or any updates to the Software that we may make available from time to time), you agree to the terms of this EULA and these Terms of Use and your use of such Software (including any updates) will be in accordance with this EULA and these Terms of Use. If you do not agree to these, we are unwilling to license our Software to you. In this case, you may not download or install our Software and you must discontinue the downloading or installation process. + +4.3. If you choose to download and install our Software and connect it to a Mendeley Web account by entering your account details, our Software collects (even while you are offline) certain data which is uploaded to our servers when you synchronize your Software and Mendeley Web account. We collect data relating to your: + +4.3.1. Academic Papers such as the author name, title and keywords for the purpose of assisting in the: + * cataloguing of your and other user's Academic Papers; + * indexing of academic articles and materials; + * searching of the indexed academic articles and materials; + * improving the document recognition process
[gentoo-commits] proj/sci:master commit in: licenses/, dev-util/nvidia-cuda-gdk/, dev-util/nvidia-cuda-gdk/files/
commit: e757802cb8a7292e98da694ff4943eb315e7ee9a
Author: Marius Brehler marbre AT linux DOT sungazer DOT de
AuthorDate: Tue Nov 18 12:16:43 2014 +
Commit: Justin Lecher jlec AT gentoo DOT org
CommitDate: Tue Nov 18 12:16:43 2014 +
URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e757802c
New ebuild: nvidia-cuda-gdk
---
dev-util/nvidia-cuda-gdk/ChangeLog | 9 ++
dev-util/nvidia-cuda-gdk/files/nvidia-healthmon| 9 ++
dev-util/nvidia-cuda-gdk/metadata.xml | 17
.../nvidia-cuda-gdk/nvidia-cuda-gdk-340.29.ebuild | 113 +
licenses/NVIDIA-gdk| 32 ++
5 files changed, 180 insertions(+)
diff --git a/dev-util/nvidia-cuda-gdk/ChangeLog
b/dev-util/nvidia-cuda-gdk/ChangeLog
new file mode 100644
index 000..6e289bb
--- /dev/null
+++ b/dev-util/nvidia-cuda-gdk/ChangeLog
@@ -0,0 +1,9 @@
+# ChangeLog for dev-util/nvidia-cuda-gdk
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*nvidia-cuda-gdk-340.29 (18 Nov 2014)
+
+ 18 Nov 2014; Marius Brehler mar...@linux.sungazer.de
+ +files/nvidia-healthmon, +metadata.xml, +nvidia-cuda-gdk-340.29.ebuild:
+ Inital commit.
diff --git a/dev-util/nvidia-cuda-gdk/files/nvidia-healthmon
b/dev-util/nvidia-cuda-gdk/files/nvidia-healthmon
new file mode 100644
index 000..007c9dc
--- /dev/null
+++ b/dev-util/nvidia-cuda-gdk/files/nvidia-healthmon
@@ -0,0 +1,9 @@
+#!/bin/bash
+
+while getopts c opt
+do
+ case $opt in
+ c) exec /opt/cuda/gdk/nvidia-healthmon/nvidia-healthmon $@;;
+ *) exec /opt/cuda/gdk/nvidia-healthmon/nvidia-healthmon -c
/etc/nvidia-healtmon/nvidia-healtmon.conf $@;;
+ esac
+done
\ No newline at end of file
diff --git a/dev-util/nvidia-cuda-gdk/metadata.xml
b/dev-util/nvidia-cuda-gdk/metadata.xml
new file mode 100644
index 000..d8e7e3d
--- /dev/null
+++ b/dev-util/nvidia-cuda-gdk/metadata.xml
@@ -0,0 +1,17 @@
+?xml version=1.0 encoding=UTF-8?
+!DOCTYPE pkgmetadata SYSTEM http://www.gentoo.org/dtd/metadata.dtd;
+pkgmetadata
+ herdsci/herd
+ maintainer
+emailmar...@linux.sungazer.de/email
+nameMarius Brehler/name
+ /maintainer
+ use
+flag name=healthmon
+ Install nvidia-healthmon.
+ /flag
+flag name=nvml
+ Install the NVIDIA Managment Library.
+ /flag
+ /use
+/pkgmetadata
diff --git a/dev-util/nvidia-cuda-gdk/nvidia-cuda-gdk-340.29.ebuild
b/dev-util/nvidia-cuda-gdk/nvidia-cuda-gdk-340.29.ebuild
new file mode 100644
index 000..f5f50f8
--- /dev/null
+++ b/dev-util/nvidia-cuda-gdk/nvidia-cuda-gdk-340.29.ebuild
@@ -0,0 +1,113 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit eutils toolchain-funcs portability unpacker versionator
+
+MYD=$(get_version_component_range 1)_$(get_version_component_range 2)
+
+DESCRIPTION=NVIDIA GPU Deployment Kit
+HOMEPAGE=https://developer.nvidia.com/gpu-deployment-kit;
+CURI=http://developer.download.nvidia.com/compute/cuda/6_5/rel/installers;
+SRC_URI=
+ amd64? ( ${CURI}/cuda_${MYD}_gdk_linux_64.run )
+ x86? ( ${CURI}/cuda_${MYD}_gdk_linux_32.run )
+
+LICENSE=NVIDIA-gdk
+SLOT=0
+KEYWORDS=~amd64
+IUSE=+healthmon +nvml +doc examples
+
+RDEPEND=
+=dev-util/nvidia-cuda-toolkit-6.5
+examples? ( =x11-drivers/nvidia-drivers-340.32[uvm] )
+media-libs/freeglut
+
+DEPEND=${RDEPEND}
+
+S=${WORKDIR}/payload
+
+RESTRICT=binchecks
+
+src_unpack() {
+ unpacker
+}
+
+src_compile() {
+ use examples || return
+ cd ${S}/nvml/example
+ emake || die
+}
+
+src_install() {
+ cd ${S}/
+
+ local i j f t
+
+ if use doc; then
+ if use healthmon ; then
+ ebegin Installing healthmon docs...
+ doman
nvidia-healthmon/docs/man/man8/nvidia-healthmon.8
+ cd
${S}/nvidia-healthmon/nvidia-healthmon-amd64-${PV}
+ treecopy $(find -type f \( -name README.txt
-name COPYING.txt -o -name *.pdf \))
${ED}/usr/share/doc/${PF}/nvidia-healthmon/
+ docompress -x $(find
${ED}/usr/share/doc/${PF}/nvidia-healthmon/ -type f -name readme.txt | sed -e
s:${ED}::)
+ cd ${S}/
+ eend
+ fi
+
+ if use healthmon ; then
+ ebegin Installing nvml docs...
+ doman nvml/doc/man/man3/*.3
+ cd ${S}/nvml/
+ treecopy $(find -type f \( -name README.txt
-name COPYRIGHT.txt -o -name *.pdf \)) ${ED}/usr/share/doc/${PF}/nvml/
+ docompress -x $(find
${ED}/usr/share/doc/${PF}/nvml/ -type f -name readme.txt | sed -e s:${ED}::)
+ cd
[gentoo-commits] proj/sci:master commit in: licenses/
commit: c374749d97c45a875b7f8a28a80d8ec346179082 Author: Justin Lecher jlec AT gentoo DOT org AuthorDate: Wed Sep 24 13:37:52 2014 + Commit: Justin Lecher jlec AT gentoo DOT org CommitDate: Wed Sep 24 13:37:52 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c374749d Update License Signed-off-by: Justin Lecher jlec AT gentoo.org --- licenses/smartgit | 255 -- 1 file changed, 75 insertions(+), 180 deletions(-) diff --git a/licenses/smartgit b/licenses/smartgit index ca05176..c1ff2a6 100644 --- a/licenses/smartgit +++ b/licenses/smartgit @@ -1,225 +1,120 @@ -License Agreement for SmartSVN +License Agreement for SmartGit -These English license agreement is a translation of the German license agreement (see the second part of this document). Valid for all legal relationships is only the German license agreement, the English version is just given for your convenience. -1 Subject of the Contract +Last date of change: 2014-08-15 + +1 Subject of the Contract: The license terms of syntevo GmbH (hereinafter called licensor) are applied for the concession of the rights of use for the entire or partly use of the object code of the software SmartGit (hereinafter called SOFTWARE) to contractors, juristic persons under public law or official fund assets in terms of §310 in conjunction with §14 BGB [Civil Code] (hereinafter called licensee). Herewith the inclusion of the licensee's own terms and conditions is contradicted, unless their validity has explicitly been agreed to. -The license terms of syntevo GmbH (hereinafter called licensor) are applied for the concession of the rights of use for the entire or partly use of the object code of the software SmartSVN (hereinafter called SOFTWARE) to contractors, juristic persons under public law or official fund assets in terms of §310 in conjunction with §14 BGB [Civil Code] (hereinafter called licensee). Herewith the inclusion of the licensee's own terms and conditions is contradicted, unless their validity has explicitly been agreed to. 2 Scope of the Rights of Use 2.1 The following terms are valid for the assignment and use of the SOFTWARE for an unlimited period of time including any documentation and the license file (a file that is custom-made for each individual granting of a license, the file being necessary for the operation of the SOFTWARE). 2.2 They are not valid for additional services such as installation, integration, parameterization and customization of the SOFTWARE to the licensee's requirements. + 3 Rights of Use 3.1 The SOFTWARE is partly copyrighted in favour of the licensor and partly in favour of other holders of rights. -3.2 The SOFTWARE must not be used if its use may result in injuries of life, body, health of human beings or injuries of animals or ecological damages (e.g. no use for atomic reactors, weapons and medical appliances). - -3.3 The SOFTWARE is handed over to the licensee for its intended use. The scope of the intended use as well as the kind and scope of the rights of use result from the assignment contract and said license terms. They especially depend on the fact if the licensee gets a - -* SOFTWARE Foundation License -* SOFTWARE Professional License -* SOFTWARE Enterprise License. - -3.3.1 SOFTWARE Foundation License - -If a SOFTWARE Foundation License is agreed upon with the licensee, the licensor grants the licensee the non-exclusive, non-transferable right, which is terminable according to the terms of clause 5 or permanent, to have the SOFTWARE used within the range of functions which was technically released for the SOFTWARE Foundation version - -* on a random number of single-user computers or on a central server or via terminal server clients -* simultaneously by a random number of users, +3.2 The SOFTWARE is handed over to the licensee for its intended use. The scope of the intended use as well as the kind and scope of the rights of use result from the assignment contract and said license terms. They especially depend on whether the licensee gets a -that means to have the SOFTWARE saved, loaded, displayed and run permanently or temporarily. -3.3.2 SOFTWARE Professional License +SOFTWARE Non-Commercial License, +SOFTWARE Commercial License, +SOFTWARE Enterprise License. +3.2.1 If a SOFTWARE Non-Commercial License is agreed upon with the licensee, the licensor grants to licensee the non-exclusive, non-transferable right, which is terminable according to the terms of clause 5 and terminated according to the terms of clause 3.2.1.1, to have the SOFTWARE used -If a SOFTWARE Professional License is agreed upon with the licensee, the licensor grants the licensee the non-exclusive, non-transferable right, which is terminable according to the terms of clause 5 or permanent, to have the SOFTWARE used +on a arbitrary number of single-user computers or
[gentoo-commits] proj/sci:master commit in: licenses/
commit: 9101586fcb69bc90a3d90785f44ad64bf3b8d89a Author: Jauhien Piatlicki jauhien AT gentoo DOT org AuthorDate: Fri Sep 5 15:13:29 2014 + Commit: Jauhien Piatlicki jauhien AT gentoo DOT org CommitDate: Fri Sep 5 15:13:29 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=9101586f add HGSC-BCM license for sci-biology/Atlas-Link --- licenses/HGSC-BCM | 8 1 file changed, 8 insertions(+) diff --git a/licenses/HGSC-BCM b/licenses/HGSC-BCM new file mode 100644 index 000..2f7b5be --- /dev/null +++ b/licenses/HGSC-BCM @@ -0,0 +1,8 @@ +© 2011 Human Genome Sequencing Center, Baylor College of Medicine. All rights reserved. + +Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: + +Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. + +Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. +
[gentoo-commits] proj/sci:master commit in: licenses/, sci-biology/VarScan/
commit: 988c1cfb216762a1c2ff9dfacc570ce27003324d Author: Jauhien Piatlicki jauhien AT gentoo DOT org AuthorDate: Fri Sep 5 15:20:01 2014 + Commit: Jauhien Piatlicki jauhien AT gentoo DOT org CommitDate: Fri Sep 5 15:20:01 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=988c1cfb sci-biology/VarScan: add Non-profit-OSL-3.0 license and metadata.xml --- licenses/Non-profit-OSL-3.0 | 63 sci-biology/VarScan/metadata.xml | 5 2 files changed, 68 insertions(+) diff --git a/licenses/Non-profit-OSL-3.0 b/licenses/Non-profit-OSL-3.0 new file mode 100644 index 000..250f786 --- /dev/null +++ b/licenses/Non-profit-OSL-3.0 @@ -0,0 +1,63 @@ + +The Non-Profit Open Software License version 3.0 (NPOSL-3.0) +[OSI Approved License] + +Non-Profit Open Software License 3.0 (NPOSL-3.0) + +This Non-Profit Open Software License (Non-Profit OSL) version 3.0 (the License) applies to any original work of authorship (the Original Work) whose owner (the Licensor) has placed the following licensing notice adjacent to the copyright notice for the Original Work: + +Licensed under the Non-Profit Open Software License version 3.0 + +1) Grant of Copyright License. Licensor grants You a worldwide, royalty-free, non-exclusive, sublicensable license, for the duration of the copyright, to do the following: + +a) to reproduce the Original Work in copies, either alone or as part of a collective work; + +b) to translate, adapt, alter, transform, modify, or arrange the Original Work, thereby creating derivative works (Derivative Works) based upon the Original Work; + +c) to distribute or communicate copies of the Original Work and Derivative Works to the public, with the proviso that copies of Original Work or Derivative Works that You distribute or communicate shall be licensed under this Non-Profit Open Software License or as provided in section 17(d); + +d) to perform the Original Work publicly; and + +e) to display the Original Work publicly. + +2) Grant of Patent License. Licensor grants You a worldwide, royalty-free, non-exclusive, sublicensable license, under patent claims owned or controlled by the Licensor that are embodied in the Original Work as furnished by the Licensor, for the duration of the patents, to make, use, sell, offer for sale, have made, and import the Original Work and Derivative Works. + +3) Grant of Source Code License. The term Source Code means the preferred form of the Original Work for making modifications to it and all available documentation describing how to modify the Original Work. Licensor agrees to provide a machine-readable copy of the Source Code of the Original Work along with each copy of the Original Work that Licensor distributes. Licensor reserves the right to satisfy this obligation by placing a machine-readable copy of the Source Code in an information repository reasonably calculated to permit inexpensive and convenient access by You for as long as Licensor continues to distribute the Original Work. + +4) Exclusions From License Grant. Neither the names of Licensor, nor the names of any contributors to the Original Work, nor any of their trademarks or service marks, may be used to endorse or promote products derived from this Original Work without express prior permission of the Licensor. Except as expressly stated herein, nothing in this License grants any license to Licensor's trademarks, copyrights, patents, trade secrets or any other intellectual property. No patent license is granted to make, use, sell, offer for sale, have made, or import embodiments of any patent claims other than the licensed claims defined in Section 2. No license is granted to the trademarks of Licensor even if such marks are included in the Original Work. Nothing in this License shall be interpreted to prohibit Licensor from licensing under terms different from this License any Original Work that Licensor otherwise would have a right to license. + +5) External Deployment. The term External Deployment means the use, distribution, or communication of the Original Work or Derivative Works in any way such that the Original Work or Derivative Works may be used by anyone other than You, whether those works are distributed or communicated to those persons or made available as an application intended for use over a network. As an express condition for the grants of license hereunder, You must treat any External Deployment by You of the Original Work or a Derivative Work as a distribution under section 1(c). + +6) Attribution Rights. You must retain, in the Source Code of any Derivative Works that You create, all copyright, patent, or trademark notices from the Source Code of the Original Work, as well as any notices of licensing and any descriptive text identified therein as an Attribution Notice. You must cause the Source Code for any Derivative Works that You create to
[gentoo-commits] proj/sci:master commit in: licenses/
commit: a4386331d8c3d665d462c09a8e343b58ed14dc32 Author: Jauhien Piatlicki jauhien AT gentoo DOT org AuthorDate: Tue Sep 2 16:48:55 2014 + Commit: Jauhien Piatlicki jauhien AT gentoo DOT org CommitDate: Tue Sep 2 16:48:55 2014 + URL:http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=a4386331 licenses: add CeCILL-2.0 license needed by sci-mathematics/gappa --- licenses/CeCILL-2.0 | 505 1 file changed, 505 insertions(+) diff --git a/licenses/CeCILL-2.0 b/licenses/CeCILL-2.0 new file mode 100644 index 000..9061494 --- /dev/null +++ b/licenses/CeCILL-2.0 @@ -0,0 +1,505 @@ +CeCILL FREE SOFTWARE LICENSE AGREEMENT + + +Notice + +This Agreement is a Free Software license agreement that is the result +of discussions between its authors in order to ensure compliance with +the two main principles guiding its drafting: + +* firstly, compliance with the principles governing the distribution + of Free Software: access to source code, broad rights granted to + users, +* secondly, the election of a governing law, French law, with which + it is conformant, both as regards the law of torts and + intellectual property law, and the protection that it offers to + both authors and holders of the economic rights over software. + +The authors of the CeCILL (for Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre]) +license are: + +Commissariat l'Energie Atomique - CEA, a public scientific, technical +and industrial research establishment, having its principal place of +business at 25 rue Leblanc, immeuble Le Ponant D, 75015 Paris, France. + +Centre National de la Recherche Scientifique - CNRS, a public scientific +and technological establishment, having its principal place of business +at 3 rue Michel-Ange, 75794 Paris cedex 16, France. + +Institut National de Recherche en Informatique et en Automatique - +INRIA, a public scientific and technological establishment, having its +principal place of business at Domaine de Voluceau, Rocquencourt, BP +105, 78153 Le Chesnay cedex, France. + + +Preamble + +The purpose of this Free Software license agreement is to grant users +the right to modify and redistribute the software governed by this +license within the framework of an open source distribution model. + +The exercising of these rights is conditional upon certain obligations +for users so as to preserve this status for all subsequent redistributions. + +In consideration of access to the source code and the rights to copy, +modify and redistribute granted by the license, users are provided only +with a limited warranty and the software's author, the holder of the +economic rights, and the successive licensors only have limited liability. + +In this respect, the risks associated with loading, using, modifying +and/or developing or reproducing the software by the user are brought to +the user's attention, given its Free Software status, which may make it +complicated to use, with the result that its use is reserved for +developers and experienced professionals having in-depth computer +knowledge. Users are therefore encouraged to load and test the +suitability of the software as regards their requirements in conditions +enabling the security of their systems and/or data to be ensured and, +more generally, to use and operate it in the same conditions of +security. This Agreement may be freely reproduced and published, +provided it is not altered, and that no provisions are either added or +removed herefrom. + +This Agreement may apply to any or all software for which the holder of +the economic rights decides to submit the use thereof to its provisions. + + +Article 1 - DEFINITIONS + +For the purpose of this Agreement, when the following expressions +commence with a capital letter, they shall have the following meaning: + +Agreement: means this license agreement, and its possible subsequent +versions and annexes. + +Software: means the software in its Object Code and/or Source Code form +and, where applicable, its documentation, as is when the Licensee +accepts the Agreement. + +Initial Software: means the Software in its Source Code and possibly its +Object Code form and, where applicable, its documentation, as is when +it is first distributed under the terms and conditions of the Agreement. + +Modified Software: means the Software modified by at least one +Contribution. + +Source Code: means all the Software's instructions and program lines to +which access is required so as to modify the Software. + +Object Code: means the binary files originating from the compilation of +the Source Code. + +Holder: means the holder(s) of the economic rights over the Initial +Software. + +Licensee: means the Software user(s) having accepted the Agreement. + +Contributor: means a Licensee having made at least one Contribution. + +Licensor: means the Holder, or any other individual or legal entity, who +distributes the
[gentoo-commits] proj/sci:master commit in: licenses/
commit: c4be0dea2c2667baa1e3ff056ac46d86ef31938e Author: Martin Mokrejš mmokrejs AT fold DOT natur DOT cuni DOT cz AuthorDate: Mon Mar 24 11:54:23 2014 + Commit: Martin Mokrejs mmokrejs AT fold DOT natur DOT cuni DOT cz CommitDate: Mon Mar 24 11:54:23 2014 + URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c4be0dea sci-biology/bambino: added missing license file --- licenses/bambino | 32 1 file changed, 32 insertions(+) diff --git a/licenses/bambino b/licenses/bambino new file mode 100644 index 000..0931f92 --- /dev/null +++ b/licenses/bambino @@ -0,0 +1,32 @@ +PROVIDER: The National Cancer Institute at the National Institutes of Health, an Agency of the Federal Government + +Definitions: +The term SOFTWARE throughout this agreement means the machine readable, binary, object code form and related documentation for the modules of the Bambino software package, which is a graphical viewer and variant detector for next-generation sequencing files in SAM/BAM format. + +The term RECIPIENT means the party that downloads the software. + +By downloading or otherwise receiving the SOFTWARE, RECIPIENT may use the SOFTWARE subject to RECIPIENT's agreement to the following terms: + +1. THE SOFTWARE SHALL NOT BE USED IN THE TREATMENT OR DIAGNOSIS OF HUMAN SUBJECTS. + +2. RECIPIENT shall not distribute the SOFTWARE, in whole or in part without express advance written approval of PROVIDER. + +3. The SOFTWARE may be used for research and academic purposes only. The SOFTWARE may not be used for commercial purposes. RECIPIENT will not license or sell or use the SOFTWARE for commercial purposes or applications. + +4. RECIPIENT shall not modify, extend, decompile, make derivatives of, merge, publish, reverse engineer or distribute the SOFTWARE without written permission from PROVIDER. + +5. RECIPIENT agrees to comply with all regulations applicable to the use of the SOFTWARE. + +6. RECIPIENT may publish or otherwise publicly disclose the results of using the SOFTWARE. RECIPIENT agrees to acknowledge PROVIDER's contribution of the SOFTWARE in all written publications containing any data or information regarding or resulting from use of the SOFTWARE. + +7. THE SOFTWARE IS PROVIDED AS IS, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE PROVIDER OR THE INDIVIDUAL DEVELOPERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY OF ANY KIND. USE OF THE SOFTWARE BY RECIPIENT IS AT RECIPIENT'S OWN RISK. PROVIDER makes no representations that the use of SOFTWARE will not infringe any patent or proprietary rights of third parties. + +8. No indemnification for any loss, claim, damage, or liability is intended or provided by either Party under this Agreement. Each Party shall be liable for any loss, claim, damage, or liability that said Party incurs as a result of said Party's activities under this Agreement, except that Provider, as an agency of the United States, assumes liability only to the extent as provided under the Federal Tort Claims Act (28 U.S.C. Chapter 171 Sections 2671-2680). + +9. RECIPIENT agrees not to claim, infer, or imply endorsement by the United States Government, or any of its organizational units, contractors or employees. RECIPIENT agrees that it will not use any trademarks, service marks, trade names, logos or product names of NCI except as required to comply with the terms of this agreement. + +10. By conveying the SOFTWARE herein, the PROVIDER and the individual developers will not be obligated to provide to the RECIPIENT, or any other party, support in any form nor will Provider be obligated to replace the SOFTWARE should it become erased or otherwise destroyed. Accordingly, the PROVIDER and the individual developers shall be under no obligation to provide RECIPIENT any service, guidance, updates or assistance. + +11. Title in the SOFTWARE shall remain with the PROVIDER. It is understood that nothing herein will be deemed to constitute, by implication or otherwise, the grant to either Party by the other of any license or other rights under any patent, patent application or other intellectual property right or interest. PROVIDER reserves the right to distribute the SOFTWARE to others and to use it for PROVIDER's own purposes. The United States Government explicitly retains all rights to use the SOFTWARE for any purpose, to have it used on the Government's behalf or to allow others to use it. + +
