[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/, profiles/

2018-07-28 Thread Michał Górny 
commit: 87a357c987080a67443e567140482094dd11fef3
Author: Michał Górny  gentoo  org>
AuthorDate: Sat Jul 28 12:03:55 2018 +
Commit: Michał Górny  gentoo  org>
CommitDate: Sat Jul 28 12:03:55 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=87a357c9

sci-physics/hoomd-blue: Remove last-rited pkg

Closes: https://bugs.gentoo.org/624688

 profiles/package.mask  |  4 --
 sci-physics/hoomd-blue/Manifest|  2 -
 sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild | 69 --
 sci-physics/hoomd-blue/hoomd-blue-.ebuild  | 69 --
 sci-physics/hoomd-blue/metadata.xml| 18 ---
 5 files changed, 162 deletions(-)

diff --git a/profiles/package.mask b/profiles/package.mask
index b7d626a5dae..8a43617455b 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -240,10 +240,6 @@ games-arcade/snake3d
 # version bump. Removal in a month.
 dev-python/django-two-factor-auth
 
-# Pacho Ramos  (17 Jun 2018)
-# Fails to build (#624688). Removal in a month.
-sci-physics/hoomd-blue
-
 # Pacho Ramos  (17 Jun 2018)
 # Dead since 2013, not compatible with latest profiles (#642568). Removal in
 # a month

diff --git a/sci-physics/hoomd-blue/Manifest b/sci-physics/hoomd-blue/Manifest
deleted file mode 100644
index 22a73244f0a..000
--- a/sci-physics/hoomd-blue/Manifest
+++ /dev/null
@@ -1,2 +0,0 @@
-DIST hoomd-blue-2.0.2.tar.bz2 2942198 BLAKE2B 
5a2f964c002fd30d89757720fc9cddf733bbeaf125f7cdbab7b9c1a421e65575936fda903d3912a315433fb530148d7cddcb5830f87d9a81acdc1ba1dbf82ea2
 SHA512 
6480639bc1b8d0534c220c7512f742a6f9eba76ad25991153735cc7f4ff88345332be4c215abd94de85249e79e85a6970be1a74a96350d4693a2c1291fbbf689
-DIST libgetar-0.5.0.tar.bz2 217067 BLAKE2B 
68d7669801d438a509582817c6e7074367a6945ee7c8f8e764dcb97e5a97a6b3394237bed4d07880a3d567b8b23dc1f159597ac51c54d03038beb1592a515952
 SHA512 
a27de8f7c976e5578142319684de15afca47c24953f590b34cad4ef88c3778aa47aa5eb9a1f83b1473aa49f4394e45dfaa4a8b5107264fa93101dea78ec5fa6b

diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild
deleted file mode 100644
index 4eeb2d72968..000
--- a/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild
+++ /dev/null
@@ -1,69 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4} )
-CMAKE_MAKEFILE_GENERATOR="ninja"
-
-inherit cmake-utils cuda python-r1
-
-DESCRIPTION="a general-purpose particle simulation toolkit"
-HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
-EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
-
-if [[ ${PV} =  ]]; then
-   EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
-   inherit git-r3
-else
-   inherit vcs-snapshot
-   GETTAR_VER=0.5.0
-   SRC_URI="https://bitbucket.org/glotzer/${PN}/get/v${PV}.tar.bz2 -> 
${P}.tar.bz2
-   
https://bitbucket.org/glotzer/libgetar/get/v${GETTAR_VER}.tar.bz2 -> 
libgetar-${GETTAR_VER}.tar.bz2"
-   KEYWORDS="~amd64"
-fi
-
-LICENSE="hoomd-blue"
-SLOT="0"
-IUSE="cuda test mpi"
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="${PYTHON_DEPS}
-   mpi? ( virtual/mpi )
-   cuda? ( dev-util/nvidia-cuda-sdk )
-   dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
-   [[ ${PV} =  ]] || mv ../libgetar-${GETTAR_VER}/* 
hoomd/extern/libgetar || die
-   use cuda && cuda_src_prepare
-   cmake-utils_src_prepare
-}
-
-src_configure() {
-   src_configure_internal() {
-   local mycmakeargs=(
-   -DENABLE_MPI=$(usex mpi)
-   -DENABLE_CUDA=$(usex cuda)
-   -DBUILD_TESTING=$(usex test)
-   -DUPDATE_SUBMODULES=OFF
-   -DPYTHON_EXECUTABLE="${PYTHON}"
-   -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
-   )
-   cmake-utils_src_configure
-   }
-   python_foreach_impl src_configure_internal
-}
-
-src_compile() {
-   python_foreach_impl cmake-utils_src_make
-}
-
-src_test() {
-   python_foreach_impl cmake-utils_src_test
-}
-
-src_install() {
-   python_foreach_impl cmake-utils_src_install
-}

diff --git a/sci-physics/hoomd-blue/hoomd-blue-.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
deleted file mode 100644
index 4eeb2d72968..000
--- a/sci-physics/hoomd-blue/hoomd-blue-.ebuild
+++ /dev/null
@@ -1,69 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_4} )
-CMAKE_MAKEFILE_GENERATOR="ninja"
-
-inherit cmake-utils cuda python-r1
-
-DESCRIPTION="a general-purpose particle simulation toolkit"
-HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
-EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/files/

2017-01-31 Thread David Seifert 
commit: d580443b7849312edf5e6115a997fbec2a3ae0df
Author: Michael Mair-Keimberger (asterix)  gmail 
 com>
AuthorDate: Mon Jan 30 18:01:53 2017 +
Commit: David Seifert  gentoo  org>
CommitDate: Tue Jan 31 08:42:03 2017 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d580443b

sci-physics/hoomd-blue: remove unused patch

Closes: https://github.com/gentoo/gentoo/pull/3730

 .../hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch  | 53 --
 1 file changed, 53 deletions(-)

diff --git a/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch 
b/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch
deleted file mode 100644
index 523c4f6..
--- a/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch
+++ /dev/null
@@ -1,53 +0,0 @@
-From 7dce8d65ad8069c6a7fdb89ebea13f55d2db8182 Mon Sep 17 00:00:00 2001
-From: "Joshua A. Anderson" 
-Date: Wed, 20 Jul 2016 14:44:07 -0400
-Subject: [PATCH] Always add -std=c++11 to CXX_FLAGS
-
-refs #173

- CMake/hoomd/HOOMDCFlagsSetup.cmake | 18 ++
- 1 file changed, 10 insertions(+), 8 deletions(-)
-
-diff --git a/CMake/hoomd/HOOMDCFlagsSetup.cmake 
b/CMake/hoomd/HOOMDCFlagsSetup.cmake
-index 2655913..db503b3 100644
 a/CMake/hoomd/HOOMDCFlagsSetup.cmake
-+++ b/CMake/hoomd/HOOMDCFlagsSetup.cmake
-@@ -32,10 +32,10 @@ if(NOT PASSED_FIRST_CONFIGURE)
- set(CMAKE_C_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler 
during release builds." FORCE)
- set(CMAKE_C_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by 
the compiler during release builds with debug info." FORCE)
- 
--set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall 
-Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the compiler 
during debug builds." FORCE)
--set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall 
-Wno-unknown-pragmas -DNDEBUG -std=c++11" CACHE STRING "Flags used by the 
compiler during minimum size release builds." FORCE)
--set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the 
compiler during release builds." FORCE)
--set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING 
"Flags used by the compiler during release builds with debug info." FORCE)
-+set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall 
-Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during debug 
builds." FORCE)
-+set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall 
-Wno-unknown-pragmas -DNDEBUG" CACHE STRING "Flags used by the compiler during 
minimum size release builds." FORCE)
-+set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler 
during release builds." FORCE)
-+set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by 
the compiler during release builds with debug info." FORCE)
- 
- elseif(CMAKE_CXX_COMPILER MATCHES "icpc")
- # default flags for intel
-@@ -44,10 +44,10 @@ if(NOT PASSED_FIRST_CONFIGURE)
- set(CMAKE_C_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags 
used by the compiler during release builds." FORCE)
- set(CMAKE_C_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE 
STRING "Flags used by the compiler during release builds with debug info." 
FORCE)
- 
--set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g -std=c++11" CACHE STRING 
"Flags used by the compiler during debug builds." FORCE)
--set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG -std=c++11" CACHE 
STRING "Flags used by the compiler during minimum size release builds." FORCE)
--set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG -std=c++11" CACHE 
STRING "Flags used by the compiler during release builds." FORCE)
--set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG 
-std=c++11" CACHE STRING "Flags used by the compiler during release builds with 
debug info." FORCE)
-+set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g" CACHE STRING "Flags used by 
the compiler during debug builds." FORCE)
-+set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG" CACHE STRING 
"Flags used by the compiler during minimum size release builds." FORCE)
-+set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags 
used by the compiler during release builds." FORCE)
-+set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE 
STRING "Flags used by the compiler during release builds with debug info." 
FORCE)
- 
- else(CMAKE_COMPILER_IS_GNUCXX)
-

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-11-13 Thread Christoph Junghans 
commit: 8ca24ebd105973792e382c86416b04d088a2ba71
Author: Christoph Junghans  gentoo  org>
AuthorDate: Mon Nov 14 01:56:47 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Mon Nov 14 01:56:47 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8ca24ebd

sci-physics/hoomd-blue: update metadata

Package-Manager: portage-2.3.0

 sci-physics/hoomd-blue/metadata.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/sci-physics/hoomd-blue/metadata.xml 
b/sci-physics/hoomd-blue/metadata.xml
index 774c4c3..1b92a0a 100644
--- a/sci-physics/hoomd-blue/metadata.xml
+++ b/sci-physics/hoomd-blue/metadata.xml
@@ -2,7 +2,7 @@
 http://www.gentoo.org/dtd/metadata.dtd;>
 
   
-ott...@gentoo.org
+jungh...@gentoo.org
 Christoph Junghans

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-08-18 Thread Christoph Junghans 
commit: 28116701d003c4edacb13418359e6170fdb3a95b
Author: Christoph Junghans  gentoo  org>
AuthorDate: Thu Aug 18 23:28:57 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Thu Aug 18 23:29:19 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=28116701

sci-physics/hoomd-blue: remove old

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/Manifest|  2 -
 sci-physics/hoomd-blue/hoomd-blue-1.0.2.ebuild | 61 --
 sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild | 56 ---
 3 files changed, 119 deletions(-)

diff --git a/sci-physics/hoomd-blue/Manifest b/sci-physics/hoomd-blue/Manifest
index 35a8a7d..efdfd16 100644
--- a/sci-physics/hoomd-blue/Manifest
+++ b/sci-physics/hoomd-blue/Manifest
@@ -1,4 +1,2 @@
-DIST hoomd-blue-1.0.2.tar.bz2 2755462 SHA256 
bca7d377fa152b5f99047c5701db0fecb244f56a7861c35eef0ded6106c520d1 SHA512 
f9042e3afacc14e62490802d16a13a77592195befa61837703a39aeedf679e81f31aaafb377384d3b0a2f0e9e40dbce7ddd8b2673086706ba223fe265a2dff27
 WHIRLPOOL 
b72c12a88941899c7a51a0a8e78783bf8c108b85f3969663453b2048a9a9c43ab8d4fd3fbcefa0a6d3add47ac880a2462d92760dc9efc5dd7a822be0252bce19
-DIST hoomd-blue-2.0.1.tar.bz2 3208100 SHA256 
432cba74cde199f178dfadf7467738d356b83e1d5026c6c83c23880898c76019 SHA512 
1edb634fd714c07401df98e6897c37638ac0a7205c10f9063866b2e759a550f5655cef2a62911020d22c7d089a5ab84456f6f7e05677f82bc37532389693ded7
 WHIRLPOOL 
eb78fd60683591e913d0623f980486049cd69bb280724151f0158076863637b824bf29d522b03cb8a2ec9b246c5540553a5b3b65c9454a009529d261bd1a3130
 DIST hoomd-blue-2.0.2.tar.bz2 2942198 SHA256 
6ed0b7c28d4490a00081630fe9afd831a862cb895636679b89e2fb0a11637861 SHA512 
6480639bc1b8d0534c220c7512f742a6f9eba76ad25991153735cc7f4ff88345332be4c215abd94de85249e79e85a6970be1a74a96350d4693a2c1291fbbf689
 WHIRLPOOL 
e0a9e23a1a5aa8348496400140e4e288a3b79c5bd7f3c09675d592aebd02a781d4ef6cc9e5fe7ac9f671e1ff791ea75d70d3fa25189ade78d9229dfae6e9a21a
 DIST libgetar-0.5.0.tar.bz2 217067 SHA256 
8b03a352f63dcf8d14e88af758f65f71e5e4f92ed01c1566cda90164ab42 SHA512 
a27de8f7c976e5578142319684de15afca47c24953f590b34cad4ef88c3778aa47aa5eb9a1f83b1473aa49f4394e45dfaa4a8b5107264fa93101dea78ec5fa6b
 WHIRLPOOL 
d5dbb0bc51bdc7241ba4c51461da0a54eb57b0e9f76e1f0a7127010ccbd375146b4aae0bfd98a431f96595459913168097502edc9d7fe60f3180ca56fb44e91a

diff --git a/sci-physics/hoomd-blue/hoomd-blue-1.0.2.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-1.0.2.ebuild
deleted file mode 100644
index 63ea837..000
--- a/sci-physics/hoomd-blue/hoomd-blue-1.0.2.ebuild
+++ /dev/null
@@ -1,61 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python{2_7,3_3,3_4} )
-
-inherit cmake-utils cuda python-single-r1
-
-DESCRIPTION="a general-purpose particle simulation toolkit"
-HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
-
-if [[ ${PV} =  ]]; then
-   EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
-   inherit git-r3
-   KEYWORDS=
-else
-   inherit vcs-snapshot
-   SRC_URI="https://bitbucket.org/glotzer/${PN}/get/v${PV}.tar.bz2 -> 
${P}.tar.bz2"
-   KEYWORDS="~amd64"
-fi
-
-LICENSE="hoomd-blue"
-SLOT="0"
-IUSE="cuda doc test mpi +zlib"
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="${PYTHON_DEPS}
-   mpi? ( virtual/mpi )
-   cuda? ( dev-util/nvidia-cuda-sdk )
-   zlib? ( sys-libs/zlib )
-   dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}
-   doc? ( app-doc/doxygen )"
-
-src_prepare() {
-   use cuda && cuda_src_prepare
-
-   cmake-utils_src_prepare
-}
-
-src_configure() {
-   local mycmakeargs=(
-   $(cmake-utils_use_enable mpi MPI)
-   $(cmake-utils_use_enable doc DOXYGEN)
-   $(cmake-utils_use_enable cuda CUDA)
-   $(cmake-utils_use_enable zlib ZLIB)
-   $(cmake-utils_use_build test BUILD_TESTING)
-   -DPYTHON_SITEDIR=$(python_get_sitedir)
-   )
-   cmake-utils_src_configure
-}
-
-src_install() {
-   use doc && HTML_DOCS=( "${BUILD_DIR}"/doc/hoomd-*doc* )
-   cmake-utils_src_install
-
-   sed -i "s/^python/${EPYTHON}/" "${ED}"/usr/bin/hoomd || die
-}

diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
deleted file mode 100644
index 30fe9f3..000
--- a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
+++ /dev/null
@@ -1,56 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=6
-
-PYTHON_COMPAT=( python{2_7,3_3,3_4} )
-CMAKE_MAKEFILE_GENERATOR="ninja"
-
-inherit cmake-utils cuda flag-o-matic python-single-r1
-
-DESCRIPTION="a general-purpose particle simulation toolkit"
-HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
-EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
-
-if [[ ${PV} =  ]]; then

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-08-18 Thread Christoph Junghans 
commit: b099686b02b6acf5276ae6ed300d742d054acd94
Author: Christoph Junghans  gentoo  org>
AuthorDate: Thu Aug 18 21:50:28 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Thu Aug 18 23:29:19 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b099686b

sci-physics/hoomd-blue: version bump

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/Manifest|  1 +
 sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild | 70 ++
 2 files changed, 71 insertions(+)

diff --git a/sci-physics/hoomd-blue/Manifest b/sci-physics/hoomd-blue/Manifest
index b6969d6..35a8a7d 100644
--- a/sci-physics/hoomd-blue/Manifest
+++ b/sci-physics/hoomd-blue/Manifest
@@ -1,3 +1,4 @@
 DIST hoomd-blue-1.0.2.tar.bz2 2755462 SHA256 
bca7d377fa152b5f99047c5701db0fecb244f56a7861c35eef0ded6106c520d1 SHA512 
f9042e3afacc14e62490802d16a13a77592195befa61837703a39aeedf679e81f31aaafb377384d3b0a2f0e9e40dbce7ddd8b2673086706ba223fe265a2dff27
 WHIRLPOOL 
b72c12a88941899c7a51a0a8e78783bf8c108b85f3969663453b2048a9a9c43ab8d4fd3fbcefa0a6d3add47ac880a2462d92760dc9efc5dd7a822be0252bce19
 DIST hoomd-blue-2.0.1.tar.bz2 3208100 SHA256 
432cba74cde199f178dfadf7467738d356b83e1d5026c6c83c23880898c76019 SHA512 
1edb634fd714c07401df98e6897c37638ac0a7205c10f9063866b2e759a550f5655cef2a62911020d22c7d089a5ab84456f6f7e05677f82bc37532389693ded7
 WHIRLPOOL 
eb78fd60683591e913d0623f980486049cd69bb280724151f0158076863637b824bf29d522b03cb8a2ec9b246c5540553a5b3b65c9454a009529d261bd1a3130
+DIST hoomd-blue-2.0.2.tar.bz2 2942198 SHA256 
6ed0b7c28d4490a00081630fe9afd831a862cb895636679b89e2fb0a11637861 SHA512 
6480639bc1b8d0534c220c7512f742a6f9eba76ad25991153735cc7f4ff88345332be4c215abd94de85249e79e85a6970be1a74a96350d4693a2c1291fbbf689
 WHIRLPOOL 
e0a9e23a1a5aa8348496400140e4e288a3b79c5bd7f3c09675d592aebd02a781d4ef6cc9e5fe7ac9f671e1ff791ea75d70d3fa25189ade78d9229dfae6e9a21a
 DIST libgetar-0.5.0.tar.bz2 217067 SHA256 
8b03a352f63dcf8d14e88af758f65f71e5e4f92ed01c1566cda90164ab42 SHA512 
a27de8f7c976e5578142319684de15afca47c24953f590b34cad4ef88c3778aa47aa5eb9a1f83b1473aa49f4394e45dfaa4a8b5107264fa93101dea78ec5fa6b
 WHIRLPOOL 
d5dbb0bc51bdc7241ba4c51461da0a54eb57b0e9f76e1f0a7127010ccbd375146b4aae0bfd98a431f96595459913168097502edc9d7fe60f3180ca56fb44e91a

diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild
new file mode 100644
index 000..d7a2cd9
--- /dev/null
+++ b/sci-physics/hoomd-blue/hoomd-blue-2.0.2.ebuild
@@ -0,0 +1,70 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_3,3_4} )
+CMAKE_MAKEFILE_GENERATOR="ninja"
+
+inherit cmake-utils cuda python-r1
+
+DESCRIPTION="a general-purpose particle simulation toolkit"
+HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
+EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
+
+if [[ ${PV} =  ]]; then
+   EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
+   inherit git-r3
+else
+   inherit vcs-snapshot
+   GETTAR_VER=0.5.0
+   SRC_URI="https://bitbucket.org/glotzer/${PN}/get/v${PV}.tar.bz2 -> 
${P}.tar.bz2
+   
https://bitbucket.org/glotzer/libgetar/get/v${GETTAR_VER}.tar.bz2 -> 
libgetar-${GETTAR_VER}.tar.bz2"
+   KEYWORDS="~amd64"
+fi
+
+LICENSE="hoomd-blue"
+SLOT="0"
+IUSE="cuda test mpi"
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="${PYTHON_DEPS}
+   mpi? ( virtual/mpi )
+   cuda? ( dev-util/nvidia-cuda-sdk )
+   dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+   [[ ${PV} =  ]] || mv ../libgetar-${GETTAR_VER}/* 
hoomd/extern/libgetar || die
+   use cuda && cuda_src_prepare
+   cmake-utils_src_prepare
+}
+
+src_configure() {
+   src_configure_internal() {
+   local mycmakeargs=(
+   -DENABLE_MPI=$(usex mpi)
+   -DENABLE_CUDA=$(usex cuda)
+   -DBUILD_TESTING=$(usex test)
+   -DUPDATE_SUBMODULES=OFF
+   -DPYTHON_EXECUTABLE="${PYTHON}"
+   -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
+   )
+   cmake-utils_src_configure
+   }
+   python_foreach_impl src_configure_internal
+}
+
+src_compile() {
+   python_foreach_impl cmake-utils_src_make
+}
+
+src_test() {
+   python_foreach_impl cmake-utils_src_test
+}
+
+src_install() {
+   python_foreach_impl cmake-utils_src_install
+}

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-07-27 Thread Christoph Junghans 
commit: 6753a0583867b1df19b54de07d9769dd4edbbdb7
Author: Christoph Junghans  gentoo  org>
AuthorDate: Wed Jul 27 16:24:56 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Wed Jul 27 17:10:29 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6753a058

sci-physics/hoomd-blue: live ebuild update

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/hoomd-blue-.ebuild | 5 +
 1 file changed, 1 insertion(+), 4 deletions(-)

diff --git a/sci-physics/hoomd-blue/hoomd-blue-.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
index 1240462..d7a2cd9 100644
--- a/sci-physics/hoomd-blue/hoomd-blue-.ebuild
+++ b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
@@ -7,7 +7,7 @@ EAPI=6
 PYTHON_COMPAT=( python{2_7,3_3,3_4} )
 CMAKE_MAKEFILE_GENERATOR="ninja"
 
-inherit cmake-utils cuda flag-o-matic python-r1
+inherit cmake-utils cuda python-r1
 
 DESCRIPTION="a general-purpose particle simulation toolkit"
 HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
@@ -40,9 +40,6 @@ src_prepare() {
[[ ${PV} =  ]] || mv ../libgetar-${GETTAR_VER}/* 
hoomd/extern/libgetar || die
use cuda && cuda_src_prepare
cmake-utils_src_prepare
-
-   #https://bitbucket.org/glotzer/hoomd-blue/issues/173
-   append-cxxflags -std=gnu++11
 }
 
 src_configure() {

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-07-23 Thread Christoph Junghans 
commit: e76c985ed55cdc692b3b49c508eee8d2b5fdfa07
Author: Christoph Junghans  gentoo  org>
AuthorDate: Sat Jul 23 23:11:57 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Sat Jul 23 23:12:14 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e76c985e

sci-physics/hoomd-blue: add multi-py build

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/hoomd-blue-.ebuild | 38 ---
 1 file changed, 28 insertions(+), 10 deletions(-)

diff --git a/sci-physics/hoomd-blue/hoomd-blue-.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
index e126c82..1240462 100644
--- a/sci-physics/hoomd-blue/hoomd-blue-.ebuild
+++ b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
@@ -7,7 +7,7 @@ EAPI=6
 PYTHON_COMPAT=( python{2_7,3_3,3_4} )
 CMAKE_MAKEFILE_GENERATOR="ninja"
 
-inherit cmake-utils cuda flag-o-matic python-single-r1
+inherit cmake-utils cuda flag-o-matic python-r1
 
 DESCRIPTION="a general-purpose particle simulation toolkit"
 HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
@@ -40,16 +40,34 @@ src_prepare() {
[[ ${PV} =  ]] || mv ../libgetar-${GETTAR_VER}/* 
hoomd/extern/libgetar || die
use cuda && cuda_src_prepare
cmake-utils_src_prepare
+
+   #https://bitbucket.org/glotzer/hoomd-blue/issues/173
+   append-cxxflags -std=gnu++11
 }
 
 src_configure() {
-   local mycmakeargs=(
-   -DENABLE_MPI=$(usex mpi)
-   -DENABLE_CUDA=$(usex cuda)
-   -DBUILD_TESTING=$(usex test)
-   -DPYTHON_EXECUTABLE="${PYTHON}"
-   -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
-   -DUPDATE_SUBMODULES=OFF
-   )
-   cmake-utils_src_configure
+   src_configure_internal() {
+   local mycmakeargs=(
+   -DENABLE_MPI=$(usex mpi)
+   -DENABLE_CUDA=$(usex cuda)
+   -DBUILD_TESTING=$(usex test)
+   -DUPDATE_SUBMODULES=OFF
+   -DPYTHON_EXECUTABLE="${PYTHON}"
+   -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
+   )
+   cmake-utils_src_configure
+   }
+   python_foreach_impl src_configure_internal
+}
+
+src_compile() {
+   python_foreach_impl cmake-utils_src_make
+}
+
+src_test() {
+   python_foreach_impl cmake-utils_src_test
+}
+
+src_install() {
+   python_foreach_impl cmake-utils_src_install
 }

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-07-20 Thread Christoph Junghans 
commit: 36ce5c81267a2880fd40e5d8e14c2c0122480083
Author: Christoph Junghans  gentoo  org>
AuthorDate: Wed Jul 20 23:07:04 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Wed Jul 20 23:07:49 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=36ce5c81

sci-physics/hoomd-blue: make 2.0.1 work without git

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/Manifest|  2 ++
 sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild | 26 +-
 sci-physics/hoomd-blue/hoomd-blue-.ebuild  | 18 --
 3 files changed, 27 insertions(+), 19 deletions(-)

diff --git a/sci-physics/hoomd-blue/Manifest b/sci-physics/hoomd-blue/Manifest
index 045e7af..b6969d6 100644
--- a/sci-physics/hoomd-blue/Manifest
+++ b/sci-physics/hoomd-blue/Manifest
@@ -1 +1,3 @@
 DIST hoomd-blue-1.0.2.tar.bz2 2755462 SHA256 
bca7d377fa152b5f99047c5701db0fecb244f56a7861c35eef0ded6106c520d1 SHA512 
f9042e3afacc14e62490802d16a13a77592195befa61837703a39aeedf679e81f31aaafb377384d3b0a2f0e9e40dbce7ddd8b2673086706ba223fe265a2dff27
 WHIRLPOOL 
b72c12a88941899c7a51a0a8e78783bf8c108b85f3969663453b2048a9a9c43ab8d4fd3fbcefa0a6d3add47ac880a2462d92760dc9efc5dd7a822be0252bce19
+DIST hoomd-blue-2.0.1.tar.bz2 3208100 SHA256 
432cba74cde199f178dfadf7467738d356b83e1d5026c6c83c23880898c76019 SHA512 
1edb634fd714c07401df98e6897c37638ac0a7205c10f9063866b2e759a550f5655cef2a62911020d22c7d089a5ab84456f6f7e05677f82bc37532389693ded7
 WHIRLPOOL 
eb78fd60683591e913d0623f980486049cd69bb280724151f0158076863637b824bf29d522b03cb8a2ec9b246c5540553a5b3b65c9454a009529d261bd1a3130
+DIST libgetar-0.5.0.tar.bz2 217067 SHA256 
8b03a352f63dcf8d14e88af758f65f71e5e4f92ed01c1566cda90164ab42 SHA512 
a27de8f7c976e5578142319684de15afca47c24953f590b34cad4ef88c3778aa47aa5eb9a1f83b1473aa49f4394e45dfaa4a8b5107264fa93101dea78ec5fa6b
 WHIRLPOOL 
d5dbb0bc51bdc7241ba4c51461da0a54eb57b0e9f76e1f0a7127010ccbd375146b4aae0bfd98a431f96595459913168097502edc9d7fe60f3180ca56fb44e91a

diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
index e4dde6f..30fe9f3 100644
--- a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
+++ b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
@@ -7,50 +7,50 @@ EAPI=6
 PYTHON_COMPAT=( python{2_7,3_3,3_4} )
 CMAKE_MAKEFILE_GENERATOR="ninja"
 
-inherit cmake-utils cuda flag-o-matic git-r3 python-single-r1
+inherit cmake-utils cuda flag-o-matic python-single-r1
 
 DESCRIPTION="a general-purpose particle simulation toolkit"
 HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
 EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
 
-if [[ ${PV} !=  ]]; then
-   EGIT_COMMIT="v${PV}"
+if [[ ${PV} =  ]]; then
+   EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
+   inherit git-r3
+else
+   inherit vcs-snapshot
+   GETTAR_VER=0.5.0
+   SRC_URI="https://bitbucket.org/glotzer/${PN}/get/v${PV}.tar.bz2 -> 
${P}.tar.bz2
+   
https://bitbucket.org/glotzer/libgetar/get/v${GETTAR_VER}.tar.bz2 -> 
libgetar-${GETTAR_VER}.tar.bz2"
PATCHES=( "${FILESDIR}/${P}-cxx11.patch" )
+   KEYWORDS="~amd64"
 fi
 
 LICENSE="hoomd-blue"
 SLOT="0"
-IUSE="cuda test mpi +zlib"
+IUSE="cuda test mpi"
 
 REQUIRED_USE="${PYTHON_REQUIRED_USE}"
 
 RDEPEND="${PYTHON_DEPS}
mpi? ( virtual/mpi )
cuda? ( dev-util/nvidia-cuda-sdk )
-   zlib? ( sys-libs/zlib )
dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]"
 DEPEND="${RDEPEND}"
-   #doc? ( app-doc/doxygen )"
 
 src_prepare() {
+   [[ ${PV} =  ]] || mv ../libgetar-${GETTAR_VER}/* 
hoomd/extern/libgetar || die
use cuda && cuda_src_prepare
-
cmake-utils_src_prepare
 }
 
 src_configure() {
local mycmakeargs=(
-DENABLE_MPI=$(usex mpi)
-   -DENABLE_DOXYGEN=OFF #$(
-DENABLE_CUDA=$(usex cuda)
-DBUILD_TESTING=$(usex test)
-DPYTHON_EXECUTABLE="${PYTHON}"
-DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
+   -DUPDATE_SUBMODULES=OFF
)
cmake-utils_src_configure
 }
-
-src_install() {
-   #use doc && HTML_DOCS=( "${BUILD_DIR}"/doc/hoomd-*doc* )
-   cmake-utils_src_install
-}

diff --git a/sci-physics/hoomd-blue/hoomd-blue-.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
index 5b01964..e126c82 100644
--- a/sci-physics/hoomd-blue/hoomd-blue-.ebuild
+++ b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
@@ -7,31 +7,37 @@ EAPI=6
 PYTHON_COMPAT=( python{2_7,3_3,3_4} )
 CMAKE_MAKEFILE_GENERATOR="ninja"
 
-inherit cmake-utils cuda flag-o-matic git-r3 python-single-r1
+inherit cmake-utils cuda flag-o-matic python-single-r1
 
 DESCRIPTION="a general-purpose particle simulation toolkit"
 HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
 EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
 
-if [[ ${PV} !=  ]]; then
+if [[ ${PV} =  ]]; then
+

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-07-20 Thread Christoph Junghans 
commit: 5cfd96c0523d6101428a9a14f204063b2ee98b03
Author: Christoph Junghans  gentoo  org>
AuthorDate: Wed Jul 20 19:55:42 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Wed Jul 20 19:55:53 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5cfd96c0

sci-physics/hoomd-blue: drop keywords

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild | 1 -
 1 file changed, 1 deletion(-)

diff --git a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
index 963ddc3..e4dde6f 100644
--- a/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
+++ b/sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild
@@ -14,7 +14,6 @@ HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
 EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
 
 if [[ ${PV} !=  ]]; then
-   KEYWORDS="~amd64"
EGIT_COMMIT="v${PV}"
PATCHES=( "${FILESDIR}/${P}-cxx11.patch" )
 fi

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/

2016-07-20 Thread Christoph Junghans 
commit: 59bedff3fe8853c82ae6a861f236ed4a0b4f39b6
Author: Christoph Junghans  gentoo  org>
AuthorDate: Wed Jul 20 19:43:25 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Wed Jul 20 19:43:52 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=59bedff3

sci-physics/hoomd-blue: import live ebuild from sci

Package-Manager: portage-2.2.28

 sci-physics/hoomd-blue/hoomd-blue-.ebuild | 49 +++
 1 file changed, 49 insertions(+)

diff --git a/sci-physics/hoomd-blue/hoomd-blue-.ebuild 
b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
new file mode 100644
index 000..5b01964
--- /dev/null
+++ b/sci-physics/hoomd-blue/hoomd-blue-.ebuild
@@ -0,0 +1,49 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python{2_7,3_3,3_4} )
+CMAKE_MAKEFILE_GENERATOR="ninja"
+
+inherit cmake-utils cuda flag-o-matic git-r3 python-single-r1
+
+DESCRIPTION="a general-purpose particle simulation toolkit"
+HOMEPAGE="http://codeblue.umich.edu/hoomd-blue/;
+EGIT_REPO_URI="https://bitbucket.org/glotzer/${PN}.git;
+
+if [[ ${PV} !=  ]]; then
+   KEYWORDS="~amd64"
+   EGIT_COMMIT="v${PV}"
+fi
+
+LICENSE="hoomd-blue"
+SLOT="0"
+IUSE="cuda test mpi +zlib"
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="${PYTHON_DEPS}
+   mpi? ( virtual/mpi )
+   cuda? ( dev-util/nvidia-cuda-sdk )
+   zlib? ( sys-libs/zlib )
+   dev-libs/boost:=[threads,python,mpi,${PYTHON_USEDEP}]"
+DEPEND="${RDEPEND}"
+
+src_prepare() {
+   use cuda && cuda_src_prepare
+   cmake-utils_src_prepare
+}
+
+src_configure() {
+   local mycmakeargs=(
+   -DENABLE_MPI=$(usex mpi)
+   -DENABLE_DOXYGEN=OFF #$(
+   -DENABLE_CUDA=$(usex cuda)
+   -DBUILD_TESTING=$(usex test)
+   -DPYTHON_EXECUTABLE="${PYTHON}"
+   -DCMAKE_INSTALL_PREFIX=$(python_get_sitedir)
+   )
+   cmake-utils_src_configure
+}

[gentoo-commits] repo/gentoo:master commit in: sci-physics/hoomd-blue/files/, sci-physics/hoomd-blue/

2016-07-20 Thread Christoph Junghans 
commit: ba16a0589e5a8575f816f2bd6844d56e50cf7513
Author: Christoph Junghans  gentoo  org>
AuthorDate: Wed Jul 20 19:34:44 2016 +
Commit: Christoph Junghans  gentoo  org>
CommitDate: Wed Jul 20 19:37:37 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ba16a058

sci-physics/hoomd-blue: version bump

Package-Manager: portage-2.2.28

 .../hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch  | 53 
 sci-physics/hoomd-blue/hoomd-blue-2.0.1.ebuild | 57 ++
 2 files changed, 110 insertions(+)

diff --git a/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch 
b/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch
new file mode 100644
index 000..523c4f6
--- /dev/null
+++ b/sci-physics/hoomd-blue/files/hoomd-blue-2.0.1-cxx11.patch
@@ -0,0 +1,53 @@
+From 7dce8d65ad8069c6a7fdb89ebea13f55d2db8182 Mon Sep 17 00:00:00 2001
+From: "Joshua A. Anderson" 
+Date: Wed, 20 Jul 2016 14:44:07 -0400
+Subject: [PATCH] Always add -std=c++11 to CXX_FLAGS
+
+refs #173
+---
+ CMake/hoomd/HOOMDCFlagsSetup.cmake | 18 ++
+ 1 file changed, 10 insertions(+), 8 deletions(-)
+
+diff --git a/CMake/hoomd/HOOMDCFlagsSetup.cmake 
b/CMake/hoomd/HOOMDCFlagsSetup.cmake
+index 2655913..db503b3 100644
+--- a/CMake/hoomd/HOOMDCFlagsSetup.cmake
 b/CMake/hoomd/HOOMDCFlagsSetup.cmake
+@@ -32,10 +32,10 @@ if(NOT PASSED_FIRST_CONFIGURE)
+ set(CMAKE_C_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler 
during release builds." FORCE)
+ set(CMAKE_C_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by 
the compiler during release builds with debug info." FORCE)
+ 
+-set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall 
-Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the compiler 
during debug builds." FORCE)
+-set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall 
-Wno-unknown-pragmas -DNDEBUG -std=c++11" CACHE STRING "Flags used by the 
compiler during minimum size release builds." FORCE)
+-set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING "Flags used by the 
compiler during release builds." FORCE)
+-set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas -std=c++11" CACHE STRING 
"Flags used by the compiler during release builds with debug info." FORCE)
++set(CMAKE_CXX_FLAGS_DEBUG "-march=${GCC_ARCH} -g -Wall 
-Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler during debug 
builds." FORCE)
++set(CMAKE_CXX_FLAGS_MINSIZEREL "-march=${GCC_ARCH} -Os -Wall 
-Wno-unknown-pragmas -DNDEBUG" CACHE STRING "Flags used by the compiler during 
minimum size release builds." FORCE)
++set(CMAKE_CXX_FLAGS_RELEASE "-march=${GCC_ARCH} -O3 -funroll-loops 
-DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by the compiler 
during release builds." FORCE)
++set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-march=${GCC_ARCH} -g -O3 
-funroll-loops -DNDEBUG -Wall -Wno-unknown-pragmas" CACHE STRING "Flags used by 
the compiler during release builds with debug info." FORCE)
+ 
+ elseif(CMAKE_CXX_COMPILER MATCHES "icpc")
+ # default flags for intel
+@@ -44,10 +44,10 @@ if(NOT PASSED_FIRST_CONFIGURE)
+ set(CMAKE_C_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags 
used by the compiler during release builds." FORCE)
+ set(CMAKE_C_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE 
STRING "Flags used by the compiler during release builds with debug info." 
FORCE)
+ 
+-set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g -std=c++11" CACHE STRING 
"Flags used by the compiler during debug builds." FORCE)
+-set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG -std=c++11" CACHE 
STRING "Flags used by the compiler during minimum size release builds." FORCE)
+-set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG -std=c++11" CACHE 
STRING "Flags used by the compiler during release builds." FORCE)
+-set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG 
-std=c++11" CACHE STRING "Flags used by the compiler during release builds with 
debug info." FORCE)
++set(CMAKE_CXX_FLAGS_DEBUG "-xHOST -O0 -g" CACHE STRING "Flags used by 
the compiler during debug builds." FORCE)
++set(CMAKE_CXX_FLAGS_MINSIZEREL "-xHOST -Os -DNDEBUG" CACHE STRING 
"Flags used by the compiler during minimum size release builds." FORCE)
++set(CMAKE_CXX_FLAGS_RELEASE "-xHOST -O3 -DNDEBUG" CACHE STRING "Flags 
used by the compiler during release builds." FORCE)
++set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-xHOST -g -O3 -DNDEBUG" CACHE 
STRING "Flags used by the compiler during release builds with debug info." 
FORCE)
+ 
+