[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: b9e6d8c7a9ee81fc5e72043d1b3ed399ae8273fd
Author: David Seifert gentoo org>
AuthorDate: Tue Mar 1 12:12:25 2022 +
Commit: David Seifert gentoo org>
CommitDate: Tue Mar 1 12:12:25 2022 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b9e6d8c7
sci-libs/avogadrolibs: drop 1.93.0
Closes: https://bugs.gentoo.org/765811
Closes: https://bugs.gentoo.org/810505
Closes: https://bugs.gentoo.org/820767
Closes: https://bugs.gentoo.org/834116
Signed-off-by: David Seifert gentoo.org>
sci-libs/avogadrolibs/Manifest | 2 -
sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild | 95 --
...vogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch | 11 ---
3 files changed, 108 deletions(-)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 638cbecca2f4..5b03e8ff5f44 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,6 +1,4 @@
-DIST avogadrolibs-1.93.0.tar.gz 2735862 BLAKE2B
b5d696f23aeeab27358ee390a30b2cf146e7119185a0d2e8d71b34d2744e534cd8b50b36d12928b5aa723118db470272b6428514593d64770d172c4bde730cf6
SHA512
1af220e5614cbd96656679c2879cb7f7c46acd135b4e6f2e5f8d0ba98601ce004e78f019a0a71c643f005451309bd194eb73eb9f66707685e5855b47e95f7eae
DIST avogadrolibs-1.95.1.tar.gz 11015910 BLAKE2B
27cb43a22e489c0279e1ed912b1e81f3c850983f367ffb89bef3a63d11204cbf761f2bce6501988ed5ef9b21b44cc5194dad4367da3ae6af65efd0cec5e7d711
SHA512
b4734c732b1686eba74055c4834fef2f9fb66d4a67cd1199c84e81965c3f6e783911e7c7c8d09386c4ff9f1322bab91fe490d3606784ae49acf5531a65a58beb
DIST avogadrolibs-crystals-1.0.1.tar.gz 151829 BLAKE2B
0a1353392a4c087977452f50ffb7db0b2976a2993651b6f7e0df7a9ce6fa8f7960223cac2916dd9f667d37518b85606d73d05e86f7489193a6a609700fc60223
SHA512
c5d6500d8472807b8d2e62888e4a09279c6aeafec81bc4981edaa74e36724b1e7f0381250c79ad297f9f0331bcb5cd8a45fce3f13ad65b9870e901a6424c0650
DIST avogadrolibs-molecules-1.0.0.tar.gz 206924 BLAKE2B
70eea3d5eb440ab2c7f29c56111f2b8cf780cc84983aa145bc4f2fe144c981978218333ba3c33cf1f620dd3180cca706dfa4e94ffaee6167f89bd3e372172218
SHA512
06891ea7ad3e65c5b0c0ad73ea01916478fcd13fd9ff0d6905d28159678a50371ba9fa2c1f68ef32604dee0c2165de29bd5d50ffbc345bfe752ef0bcb13126f2
-DIST linux64-genXrdPattern-avogadrolibs-1.93.0 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
DIST linux64-genXrdPattern-avogadrolibs-1.95.1 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
deleted file mode 100644
index 4db9d9a0c2b9..
--- a/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
+++ /dev/null
@@ -1,95 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-inherit cmake-utils flag-o-matic
-
-DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
-HOMEPAGE="https://www.openchemistry.org/
https://github.com/OpenChemistry/avogadrolibs";
-SRC_URI="
- https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz ->
${P}.tar.gz
- vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
-> linux64-genXrdPattern-${P} )
-"
-
-SLOT="0"
-LICENSE="BSD GPL-2+"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-
-# static-plugins needs to be enabled until upstream fixes
-# https://github.com/OpenChemistry/avogadrolibs/issues/436
-#IUSE="archive doc hdf5 qt5 static-plugins test vtk"
-IUSE="archive doc hdf5 qt5 test vtk"
-RESTRICT="!test? ( test )"
-
-REQUIRED_USE="vtk? ( qt5 )"
-
-# TODO: Not yet packaged:
-# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
-# sci-libs/spglib (https://atztogo.github.io/spglib/)
-RDEPEND="
- dev-libs/jsoncpp:=
- >=sci-chemistry/molequeue-0.7
- sci-libs/spglib
- archive? ( app-arch/libarchive )
- hdf5? ( sci-libs/hdf5:= )
- qt5? (
- dev-qt/qtconcurrent:5
- dev-qt/qtcore:5
- dev-qt/qtgui:5
- dev-qt/qtnetwork:5
- dev-qt/qtwidgets:5
- media-libs/glew:0=
- virtual/opengl
- )
- vtk? ( sci-libs/vtk[qt5,views] )
-"
-DEPEND="${RDEPEND}
- dev-cpp/eigen:3
- qt5? ( dev-qt/linguist-tools:5 )
- test? ( dev-cpp/gtest )"
-
-PATCHES=(
- # https://github.com/OpenChemistry/avogadrolibs/issues/449
- "${FILESDIR}"/${PN}-1.93.0-fix_AvogadroLibsConfig.patch
- "${FILESDIR}/"${PN}-1.
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: 68245b30229ce2756c08706b5b075fd0422a40d8
Author: David Seifert gentoo org>
AuthorDate: Tue Mar 1 12:12:24 2022 +
Commit: David Seifert gentoo org>
CommitDate: Tue Mar 1 12:12:24 2022 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=68245b30
sci-libs/avogadrolibs: add 1.95.1
Bug: https://bugs.gentoo.org/765811
Bug: https://bugs.gentoo.org/834116
Signed-off-by: David Seifert gentoo.org>
sci-libs/avogadrolibs/Manifest | 4 +
sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild | 89 ++
.../files/avogadrolibs-1.95.1-tests.patch | 13
3 files changed, 106 insertions(+)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 9de9f0dac5a1..638cbecca2f4 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,2 +1,6 @@
DIST avogadrolibs-1.93.0.tar.gz 2735862 BLAKE2B
b5d696f23aeeab27358ee390a30b2cf146e7119185a0d2e8d71b34d2744e534cd8b50b36d12928b5aa723118db470272b6428514593d64770d172c4bde730cf6
SHA512
1af220e5614cbd96656679c2879cb7f7c46acd135b4e6f2e5f8d0ba98601ce004e78f019a0a71c643f005451309bd194eb73eb9f66707685e5855b47e95f7eae
+DIST avogadrolibs-1.95.1.tar.gz 11015910 BLAKE2B
27cb43a22e489c0279e1ed912b1e81f3c850983f367ffb89bef3a63d11204cbf761f2bce6501988ed5ef9b21b44cc5194dad4367da3ae6af65efd0cec5e7d711
SHA512
b4734c732b1686eba74055c4834fef2f9fb66d4a67cd1199c84e81965c3f6e783911e7c7c8d09386c4ff9f1322bab91fe490d3606784ae49acf5531a65a58beb
+DIST avogadrolibs-crystals-1.0.1.tar.gz 151829 BLAKE2B
0a1353392a4c087977452f50ffb7db0b2976a2993651b6f7e0df7a9ce6fa8f7960223cac2916dd9f667d37518b85606d73d05e86f7489193a6a609700fc60223
SHA512
c5d6500d8472807b8d2e62888e4a09279c6aeafec81bc4981edaa74e36724b1e7f0381250c79ad297f9f0331bcb5cd8a45fce3f13ad65b9870e901a6424c0650
+DIST avogadrolibs-molecules-1.0.0.tar.gz 206924 BLAKE2B
70eea3d5eb440ab2c7f29c56111f2b8cf780cc84983aa145bc4f2fe144c981978218333ba3c33cf1f620dd3180cca706dfa4e94ffaee6167f89bd3e372172218
SHA512
06891ea7ad3e65c5b0c0ad73ea01916478fcd13fd9ff0d6905d28159678a50371ba9fa2c1f68ef32604dee0c2165de29bd5d50ffbc345bfe752ef0bcb13126f2
DIST linux64-genXrdPattern-avogadrolibs-1.93.0 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
+DIST linux64-genXrdPattern-avogadrolibs-1.95.1 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild
new file mode 100644
index ..f396fb04e2d9
--- /dev/null
+++ b/sci-libs/avogadrolibs/avogadrolibs-1.95.1.ebuild
@@ -0,0 +1,89 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit cmake
+
+DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
+HOMEPAGE="https://www.openchemistry.org/
https://github.com/OpenChemistry/avogadrolibs";
+SRC_URI="
+ https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz ->
${P}.tar.gz
+
https://github.com/OpenChemistry/molecules/archive/refs/tags/1.0.0.tar.gz ->
${PN}-molecules-1.0.0.tar.gz
+
https://github.com/OpenChemistry/crystals/archive/refs/tags/1.0.1.tar.gz ->
${PN}-crystals-1.0.1.tar.gz
+ vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
-> linux64-genXrdPattern-${P} )"
+
+LICENSE="BSD GPL-2+"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="archive doc hdf5 qt5 static-plugins test vtk"
+RESTRICT="!test? ( test )"
+REQUIRED_USE="vtk? ( qt5 )"
+
+# TODO: Not yet packaged:
+# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
+RDEPEND="
+ >=sci-chemistry/molequeue-0.7
+ archive? ( app-arch/libarchive:= )
+ hdf5? ( sci-libs/hdf5:= )
+ qt5? (
+ dev-qt/qtconcurrent:5
+ dev-qt/qtcore:5
+ dev-qt/qtgui:5
+ dev-qt/qtnetwork:5
+ dev-qt/qtsvg:5
+ dev-qt/qtwidgets:5
+ media-libs/glew:0=
+ virtual/opengl
+ )
+ vtk? ( sci-libs/vtk[qt5,views] )"
+DEPEND="${RDEPEND}
+ dev-cpp/eigen:3
+ test? ( dev-cpp/gtest )"
+BDEPEND="qt5? ( dev-qt/linguist-tools:5 )"
+
+PATCHES=(
+ "${FILESDIR}/"${PN}-1.91.0_pre20180406-bundled-genxrdpattern.patch
+ "${FILESDIR}/"${PN}-1.95.1-tests.patch
+)
+
+src_unpack() {
+ default
+
+ if use vtk; then
+ cp "${DISTDIR}"/linux64-genXrdPattern-${P}
"${WORKDIR}/genXrdPattern
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: b12f2d6d85ef7555ae930ec018380e7a7a22
Author: Pacho Ramos gentoo org>
AuthorDate: Sat Mar 14 17:30:13 2020 +
Commit: Pacho Ramos gentoo org>
CommitDate: Sat Mar 14 17:32:06 2020 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=b12f2d6d
sci-libs/avogadrolibs: Bump to 1.93.0
Closes: https://bugs.gentoo.org/652918
Package-Manager: Portage-2.3.93, Repoman-2.3.20
Signed-off-by: Pacho Ramos gentoo.org>
sci-libs/avogadrolibs/Manifest | 1 +
sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild | 89 ++
...vogadrolibs-1.93.0-fix_AvogadroLibsConfig.patch | 11 +++
3 files changed, 101 insertions(+)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 3eb86b3019a..09c6bc5a759 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,2 +1,3 @@
DIST avogadrolibs-1.91.0_pre20180415.tar.gz 2541101 BLAKE2B
526d2135af123d31220c8dd87351a35464e3dfd6b8d411d6dc9a6b3e74693090adfa3b61198a6a296eac99e6bbd67623f7aeda6a1752a09e3e3bcaa3df4d5008
SHA512
1cc646368f70523fcf20c6cf598025234162e0c81da64a3b5375c1691a6743f2aceb1f13230937bf9da045e725a23c1c89c8121e07b31ef9e2c7987b1feafccc
+DIST avogadrolibs-1.93.0.tar.gz 2735862 BLAKE2B
b5d696f23aeeab27358ee390a30b2cf146e7119185a0d2e8d71b34d2744e534cd8b50b36d12928b5aa723118db470272b6428514593d64770d172c4bde730cf6
SHA512
1af220e5614cbd96656679c2879cb7f7c46acd135b4e6f2e5f8d0ba98601ce004e78f019a0a71c643f005451309bd194eb73eb9f66707685e5855b47e95f7eae
DIST linux64-genXrdPattern 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
new file mode 100644
index 000..a1cbede0ed2
--- /dev/null
+++ b/sci-libs/avogadrolibs/avogadrolibs-1.93.0.ebuild
@@ -0,0 +1,89 @@
+# Copyright 1999-2020 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+inherit cmake-utils flag-o-matic
+
+DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
+HOMEPAGE="https://www.openchemistry.org/
https://github.com/OpenChemistry/avogadrolibs";
+SRC_URI="
+ https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz ->
${P}.tar.gz
+ vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
)
+"
+
+SLOT="0"
+LICENSE="BSD GPL-2+"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+# static-plugins needs to be enabled until upstream fixes
+# https://github.com/OpenChemistry/avogadrolibs/issues/436
+#IUSE="archive doc hdf5 qt5 static-plugins test vtk"
+IUSE="archive doc hdf5 qt5 test vtk"
+RESTRICT="!test? ( test )"
+
+REQUIRED_USE="vtk? ( qt5 )"
+
+# TODO: Not yet packaged:
+# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
+# sci-libs/spglib (https://atztogo.github.io/spglib/)
+RDEPEND="
+ dev-libs/jsoncpp:=
+ >=sci-chemistry/molequeue-0.7
+ sci-libs/spglib
+ archive? ( app-arch/libarchive )
+ hdf5? ( sci-libs/hdf5:= )
+ qt5? (
+ dev-qt/qtconcurrent:5
+ dev-qt/qtcore:5
+ dev-qt/qtgui:5
+ dev-qt/qtnetwork:5
+ dev-qt/qtwidgets:5
+ media-libs/glew:0=
+ virtual/opengl
+ )
+ vtk? ( sci-libs/vtk[qt5,views] )
+"
+DEPEND="${RDEPEND}
+ dev-cpp/eigen:3
+ qt5? ( dev-qt/linguist-tools:5 )
+ test? ( dev-cpp/gtest )"
+
+PATCHES=(
+ # https://github.com/OpenChemistry/avogadrolibs/issues/449
+ "${FILESDIR}"/${PN}-1.93.0-fix_AvogadroLibsConfig.patch
+)
+
+src_unpack() {
+ default
+ if use vtk; then
+ cp "${DISTDIR}"/linux64-genXrdPattern
"${WORKDIR}/genXrdPattern" || die
+ fi
+}
+
+src_configure() {
+ # -DBUILD_STATIC_PLUGINS=$(usex static-plugins)
+ local mycmakeargs=(
+ -DCMAKE_INSTALL_DOCDIR="${EPREFIX}/usr/share/doc/${PF}"
+ -DUSE_PROTOCALL=OFF
+ -DBUILD_GPL_PLUGINS=ON
+ -DUSE_MOLEQUEUE=ON
+ -DUSE_MMTF=OFF
+ -DUSE_LIBMSYM=OFF
+ -DUSE_SPGLIB=OFF
+ -DUSE_PYTHON=OFF
+ -DUSE_LIBARCHIVE=$(usex archive)
+ -DBUILD_DOCUMENTATION=$(usex doc)
+ -DUSE_HDF5=$(usex hdf5)
+ -DENABLE_TRANSLATIONS=$(usex qt5)
+ -DUSE_OPENGL=$(usex qt5)
+ -DUSE_QT=$(usex qt5)
+ -DBUILD_STATIC_PLUGINS=ON
+ -DENABLE_TESTING=$(usex test)
+ -DUSE_VTK=$(usex vtk)
+ )
+ use vtk && mycmakeargs+=(
+ -DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern"
+ )
+
+ cmake-utils_src_config
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: 74df936f8a7b205cc8c94c121de6cb84c5823a58
Author: Andreas Sturmlechner gentoo org>
AuthorDate: Tue Apr 17 09:38:45 2018 +
Commit: Andreas Sturmlechner gentoo org>
CommitDate: Tue Apr 17 12:02:22 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=74df936f
sci-libs/avogadrolibs: Add 1.91.0_pre20180415, build w/ Qt 5.11_beta3
Package-Manager: Portage-2.3.29, Repoman-2.3.9
sci-libs/avogadrolibs/Manifest | 1 +
.../avogadrolibs-1.91.0_pre20180415.ebuild | 88 ++
...avogadrolibs-1.91.0_pre20180415-qt-5.11b3.patch | 100 +
3 files changed, 189 insertions(+)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 1651cd867a2..e748fcaf356 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,2 +1,3 @@
DIST avogadrolibs-1.91.0_pre20180406.tar.gz 857345 BLAKE2B
8e5c6b0a838a2a6b7dc925c1b544ab4d4de8b7769b1fe8d787127a1014b1243da89a2a6f6cfc871181f81a443c3ee63d758369f003afaf591c9373c9d5122ee3
SHA512
1814b2105615aabc1df78b14c581e78fea20a1e4ace8979bb2ad123ab0994d90c3935e37f0cc58b60d3307ffe682599a93d8cadddc22b4ba524caaec1a2c5319
+DIST avogadrolibs-1.91.0_pre20180415.tar.gz 2541101 BLAKE2B
526d2135af123d31220c8dd87351a35464e3dfd6b8d411d6dc9a6b3e74693090adfa3b61198a6a296eac99e6bbd67623f7aeda6a1752a09e3e3bcaa3df4d5008
SHA512
1cc646368f70523fcf20c6cf598025234162e0c81da64a3b5375c1691a6743f2aceb1f13230937bf9da045e725a23c1c89c8121e07b31ef9e2c7987b1feafccc
DIST linux64-genXrdPattern 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180415.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180415.ebuild
new file mode 100644
index 000..df8f4182395
--- /dev/null
+++ b/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180415.ebuild
@@ -0,0 +1,88 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+COMMIT=606debb5d7c2c4020478264c609f895584fc5e38
+inherit cmake-utils
+
+DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
+HOMEPAGE="https://www.openchemistry.org/";
+SRC_URI="https://github.com/OpenChemistry/${PN}/archive/${COMMIT}.tar.gz ->
${P}.tar.gz
+ vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
)"
+
+SLOT="0"
+LICENSE="BSD GPL-2+"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE="archive doc hdf5 qt5 static-plugins test vtk"
+
+REQUIRED_USE="vtk? ( qt5 )"
+
+# TODO: Not yet packaged:
+# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
+# sci-libs/spglib (https://atztogo.github.io/spglib/)
+RDEPEND="
+ dev-libs/jsoncpp:=
+ >=sci-chemistry/molequeue-0.7
+ archive? ( app-arch/libarchive )
+ hdf5? ( sci-libs/hdf5:= )
+ qt5? (
+ dev-qt/qtconcurrent:5
+ dev-qt/qtcore:5
+ dev-qt/qtgui:5
+ dev-qt/qtnetwork:5
+ dev-qt/qtwidgets:5
+ media-libs/glew:0=
+ virtual/opengl
+ )
+ vtk? ( sci-libs/vtk[qt5,views] )
+"
+DEPEND="${RDEPEND}
+ dev-cpp/eigen:3
+ qt5? (
+ dev-qt/linguist-tools:5
+ dev-qt/qtopengl:5
+ )
+ test? ( dev-cpp/gtest )"
+
+S="${WORKDIR}/${PN}-${COMMIT}"
+
+PATCHES=(
+ "${FILESDIR}"/${PN}-0.7.2-6464.patch
+ "${FILESDIR}/"${PN}-1.91.0_pre20180406-underlinking.patch
+ "${FILESDIR}/"${PN}-1.91.0_pre20180406-unbundle-jsoncpp.patch
+ "${FILESDIR}/"${PN}-1.91.0_pre20180406-bundled-genxrdpattern.patch
+ "${FILESDIR}/"${P}-qt-5.11b3.patch
+)
+
+src_unpack() {
+ unpack ${P}.tar.gz
+ if use vtk; then
+ cp "${DISTDIR}"/linux64-genXrdPattern
"${WORKDIR}/genXrdPattern" || die
+ fi
+}
+
+src_configure() {
+ local mycmakeargs=(
+ -DUSE_PROTOCALL=OFF
+ -DBUILD_GPL_PLUGINS=ON
+ -DUSE_MOLEQUEUE=ON
+ -DUSE_LIBMSYM=OFF
+ -DUSE_LIBSPG=OFF
+ -DUSE_PYTHON=OFF
+ -DUSE_LIBARCHIVE=$(usex archive)
+ -DBUILD_DOCUMENTATION=$(usex doc)
+ -DUSE_HDF5=$(usex hdf5)
+ -DENABLE_TRANSLATIONS=$(usex qt5)
+ -DUSE_OPENGL=$(usex qt5)
+ -DUSE_QT=$(usex qt5)
+ -DBUILD_STATIC_PLUGINS=$(usex static-plugins)
+ -DENABLE_TESTING=$(usex test)
+ -DUSE_VTK=$(usex vtk)
+ )
+ use vtk && mycmakeargs+=(
+ -DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern"
+ )
+
+ cmake-utils_src_configure
+}
diff --git
a/sci-libs/avogadrolibs/files/avogadrol
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: 60040aee5be51113a6d9d42e0ef1dcfa6815d89b
Author: Andreas Sturmlechner gentoo org>
AuthorDate: Tue Apr 17 09:39:22 2018 +
Commit: Andreas Sturmlechner gentoo org>
CommitDate: Tue Apr 17 12:02:22 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=60040aee
sci-libs/avogadrolibs: Drop old snapshot
Package-Manager: Portage-2.3.29, Repoman-2.3.9
sci-libs/avogadrolibs/Manifest | 1 -
.../avogadrolibs-1.91.0_pre20180406-r1.ebuild | 84 --
.../avogadrolibs-1.91.0_pre20180406-qt-5.11.patch | 29
3 files changed, 114 deletions(-)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index e748fcaf356..3eb86b3019a 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,3 +1,2 @@
-DIST avogadrolibs-1.91.0_pre20180406.tar.gz 857345 BLAKE2B
8e5c6b0a838a2a6b7dc925c1b544ab4d4de8b7769b1fe8d787127a1014b1243da89a2a6f6cfc871181f81a443c3ee63d758369f003afaf591c9373c9d5122ee3
SHA512
1814b2105615aabc1df78b14c581e78fea20a1e4ace8979bb2ad123ab0994d90c3935e37f0cc58b60d3307ffe682599a93d8cadddc22b4ba524caaec1a2c5319
DIST avogadrolibs-1.91.0_pre20180415.tar.gz 2541101 BLAKE2B
526d2135af123d31220c8dd87351a35464e3dfd6b8d411d6dc9a6b3e74693090adfa3b61198a6a296eac99e6bbd67623f7aeda6a1752a09e3e3bcaa3df4d5008
SHA512
1cc646368f70523fcf20c6cf598025234162e0c81da64a3b5375c1691a6743f2aceb1f13230937bf9da045e725a23c1c89c8121e07b31ef9e2c7987b1feafccc
DIST linux64-genXrdPattern 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406-r1.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406-r1.ebuild
deleted file mode 100644
index 377cfc965c5..000
--- a/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406-r1.ebuild
+++ /dev/null
@@ -1,84 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-COMMIT=f414794a168712f72884cdcfba818def5f42e721
-inherit cmake-utils
-
-DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
-HOMEPAGE="https://www.openchemistry.org/";
-SRC_URI="https://github.com/OpenChemistry/${PN}/archive/${COMMIT}.tar.gz ->
${P}.tar.gz
- vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
)"
-
-SLOT="0"
-LICENSE="BSD GPL-2+"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="archive doc hdf5 qt5 static-plugins test vtk"
-
-REQUIRED_USE="vtk? ( qt5 )"
-
-# TODO: Not yet packaged:
-# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
-# sci-libs/spglib (https://atztogo.github.io/spglib/)
-RDEPEND="
- dev-libs/jsoncpp:=
- >=sci-chemistry/molequeue-0.7
- archive? ( app-arch/libarchive )
- hdf5? ( sci-libs/hdf5:= )
- qt5? (
- dev-qt/qtconcurrent:5
- dev-qt/qtcore:5
- dev-qt/qtgui:5
- dev-qt/qtnetwork:5
- dev-qt/qtwidgets:5
- media-libs/glew:0=
- virtual/opengl
- )
- vtk? ( sci-libs/vtk[qt5,views] )
-"
-DEPEND="${RDEPEND}
- dev-cpp/eigen:3
- dev-qt/qtopengl:5
- test? ( dev-cpp/gtest )"
-
-S="${WORKDIR}/${PN}-${COMMIT}"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-0.7.2-6464.patch
- "${FILESDIR}/"${P}-underlinking.patch
- "${FILESDIR}/"${P}-unbundle-jsoncpp.patch
- "${FILESDIR}/"${P}-bundled-genxrdpattern.patch
- "${FILESDIR}/"${P}-qt-5.11.patch
-)
-
-src_unpack() {
- unpack ${P}.tar.gz
- if use vtk; then
- cp "${DISTDIR}"/linux64-genXrdPattern
"${WORKDIR}/genXrdPattern" || die
- fi
-}
-
-src_configure() {
- local mycmakeargs=(
- -DUSE_PROTOCALL=OFF
- -DBUILD_GPL_PLUGINS=ON
- -DUSE_MOLEQUEUE=ON
- -DUSE_LIBMSYM=OFF
- -DUSE_LIBSPG=OFF
- -DUSE_PYTHON=OFF
- -DUSE_LIBARCHIVE=$(usex archive)
- -DBUILD_DOCUMENTATION=$(usex doc)
- -DUSE_HDF5=$(usex hdf5)
- -DUSE_OPENGL=$(usex qt5)
- -DUSE_QT=$(usex qt5)
- -DBUILD_STATIC_PLUGINS=$(usex static-plugins)
- -DENABLE_TESTING=$(usex test)
- -DUSE_VTK=$(usex vtk)
- )
- use vtk && mycmakeargs+=(
- -DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern"
- )
-
- cmake-utils_src_configure
-}
diff --git
a/sci-libs/avogadrolibs/files/avogadrolibs-1.91.0_pre20180406-qt-5.11.patch
b/sci-libs/avogadrolibs/files/avogadrolibs-1.91.0_pre20180406-qt-5.11.patch
deleted file mode 100644
index 437b1e755af..000
--- a/sci-libs/avogadrolibs/files/avogadroli
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: d38044ae854dae2c28301beeb32066b2c75089ba
Author: Andreas Sturmlechner gentoo org>
AuthorDate: Sat Apr 7 21:31:38 2018 +
Commit: Andreas Sturmlechner gentoo org>
CommitDate: Sun Apr 8 09:53:53 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d38044ae
sci-libs/avogadrolibs: Drop 0.9.0, fails to build
Bug: https://bugs.gentoo.org/645248
Package-Manager: Portage-2.3.28, Repoman-2.3.9
sci-libs/avogadrolibs/Manifest | 1 -
sci-libs/avogadrolibs/avogadrolibs-0.9.0.ebuild| 66 --
.../files/avogadrolibs-0.8.0-underlinking.patch| 34 ---
3 files changed, 101 deletions(-)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index 1a7ac4c9fe8..1651cd867a2 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,3 +1,2 @@
-DIST avogadrolibs-0.9.0.tar.gz 742370 BLAKE2B
cd104cea48b82a1ac86fdb9e93717e2647f57a0d713673d8b340d259f73d6d9985decf0c4e4d83f13d54d12ae2aefee8e75b5d04861f8ab67b9b42690c3c74f7
SHA512
7cb000cd6399f33483c38b4f8a9c4a4688f5054cba35e101bed0f2371cea614ace6b3fc65c3ed1418976afef4462a09be868500435a5ae9c98a7ac496c10c36f
DIST avogadrolibs-1.91.0_pre20180406.tar.gz 857345 BLAKE2B
8e5c6b0a838a2a6b7dc925c1b544ab4d4de8b7769b1fe8d787127a1014b1243da89a2a6f6cfc871181f81a443c3ee63d758369f003afaf591c9373c9d5122ee3
SHA512
1814b2105615aabc1df78b14c581e78fea20a1e4ace8979bb2ad123ab0994d90c3935e37f0cc58b60d3307ffe682599a93d8cadddc22b4ba524caaec1a2c5319
DIST linux64-genXrdPattern 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-0.9.0.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-0.9.0.ebuild
deleted file mode 100644
index 7c4a4362b85..000
--- a/sci-libs/avogadrolibs/avogadrolibs-0.9.0.ebuild
+++ /dev/null
@@ -1,66 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit cmake-utils
-
-DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
-HOMEPAGE="http://www.openchemistry.org/";
-SRC_URI="https://github.com/OpenChemistry/${PN}/archive/${PV}.tar.gz ->
${P}.tar.gz"
-
-SLOT="0"
-LICENSE="BSD GPL-2+"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="doc hdf5 opengl qt5 static-plugins test vtk"
-
-REQUIRED_USE="qt5? ( opengl )"
-
-RDEPEND="
- >=sci-chemistry/molequeue-0.7
- sci-libs/chemkit
- hdf5? ( sci-libs/hdf5:= )
- opengl? (
- dev-qt/qtopengl:5
- media-libs/glew
- )
- qt5? (
- dev-qt/qtconcurrent:5
- dev-qt/qtcore:5
- dev-qt/qtgui:5
- dev-qt/qtnetwork:5
- dev-qt/qtwidgets:5
- )
- vtk? ( sci-libs/vtk )
-"
-DEPEND="${RDEPEND}
- dev-cpp/eigen:3
- test? ( dev-cpp/gtest )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-0.7.2-6464.patch
- "${FILESDIR}/"${PN}-0.8.0-underlinking.patch
-)
-
-src_configure() {
- local mycmakeargs=(
- -DUSE_PROTOCALL=OFF
- -DBUILD_GPL_PLUGINS=ON
- -DUSE_MOLEQUEUE=ON
- -DUSE_HDF5=$(usex hdf5)
- -DBUILD_DOCUMENTATION=$(usex doc)
- -DUSE_OPENGL=$(usex opengl)
- -DUSE_QT=$(usex qt5)
- -DBUILD_STATIC_PLUGINS=$(usex static-plugins)
- -DENABLE_TESTING=$(usex test)
- -DUSE_VTK=$(usex vtk)
- )
- cmake-utils_src_configure
-}
-
-src_install() {
- cmake-utils_src_install
-
- # TODO: bundles jsoncpp
- rm "${ED%/}"/usr/lib64/libjsoncpp.a || die
-}
diff --git a/sci-libs/avogadrolibs/files/avogadrolibs-0.8.0-underlinking.patch
b/sci-libs/avogadrolibs/files/avogadrolibs-0.8.0-underlinking.patch
deleted file mode 100644
index b29f3afe761..000
--- a/sci-libs/avogadrolibs/files/avogadrolibs-0.8.0-underlinking.patch
+++ /dev/null
@@ -1,34 +0,0 @@
-Fix underlinking problems in shared libraries.
-
avogadrolibs-0.8.0/avogadro/qtplugins/apbs/CMakeLists.txt
-+++ avogadrolibs-0.8.0/avogadro/qtplugins/apbs/CMakeLists.txt
-@@ -23,4 +23,4 @@
- "${apbs_uis}"
- )
-
--target_link_libraries(apbs LINK_PRIVATE AvogadroIO MoleQueueClient)
-+target_link_libraries(apbs LINK_PRIVATE AvogadroIO MoleQueueClient
AvogadroMoleQueue)
avogadrolibs-0.8.0/avogadro/qtplugins/playertool/CMakeLists.txt
-+++ avogadrolibs-0.8.0/avogadro/qtplugins/playertool/CMakeLists.txt
-@@ -7,3 +7,5 @@
- ""
- playertool.qrc
- )
-+
-+target_link_libraries(PlayerTool LINK_PRIVATE Qt5OpenGL)
avogadrolibs-0.8.0/avogadro/qtplugins/povray/CMakeLists.txt
-+++ avogadrolibs-0.8.0/avogadro/qtplugins/povray/CMakeLists.txt
-@@ -8,3 +8,5 @@
- "povray.cpp"
-
[gentoo-commits] repo/gentoo:master commit in: sci-libs/avogadrolibs/files/, sci-libs/avogadrolibs/
commit: 1255c53cc64cb280bff21ad7ae82ab91ec595123
Author: Andreas Sturmlechner gentoo org>
AuthorDate: Sun Apr 8 00:25:18 2018 +
Commit: Andreas Sturmlechner gentoo org>
CommitDate: Sun Apr 8 09:53:52 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1255c53c
sci-libs/avogadrolibs: Unbundle jsoncpp, fix USE=vtk
Bug: https://bugs.gentoo.org/649860
Closes: https://bugs.gentoo.org/624242
Package-Manager: Portage-2.3.28, Repoman-2.3.9
sci-libs/avogadrolibs/Manifest | 1 +
.../avogadrolibs-1.91.0_pre20180406.ebuild | 29 +++--
...-1.91.0_pre20180406-bundled-genxrdpattern.patch | 44 +++
...olibs-1.91.0_pre20180406-unbundle-jsoncpp.patch | 143 +
4 files changed, 208 insertions(+), 9 deletions(-)
diff --git a/sci-libs/avogadrolibs/Manifest b/sci-libs/avogadrolibs/Manifest
index bbf158508b8..1a7ac4c9fe8 100644
--- a/sci-libs/avogadrolibs/Manifest
+++ b/sci-libs/avogadrolibs/Manifest
@@ -1,2 +1,3 @@
DIST avogadrolibs-0.9.0.tar.gz 742370 BLAKE2B
cd104cea48b82a1ac86fdb9e93717e2647f57a0d713673d8b340d259f73d6d9985decf0c4e4d83f13d54d12ae2aefee8e75b5d04861f8ab67b9b42690c3c74f7
SHA512
7cb000cd6399f33483c38b4f8a9c4a4688f5054cba35e101bed0f2371cea614ace6b3fc65c3ed1418976afef4462a09be868500435a5ae9c98a7ac496c10c36f
DIST avogadrolibs-1.91.0_pre20180406.tar.gz 857345 BLAKE2B
8e5c6b0a838a2a6b7dc925c1b544ab4d4de8b7769b1fe8d787127a1014b1243da89a2a6f6cfc871181f81a443c3ee63d758369f003afaf591c9373c9d5122ee3
SHA512
1814b2105615aabc1df78b14c581e78fea20a1e4ace8979bb2ad123ab0994d90c3935e37f0cc58b60d3307ffe682599a93d8cadddc22b4ba524caaec1a2c5319
+DIST linux64-genXrdPattern 7480152 BLAKE2B
dca8285c41aadfaa20c72f337e0f02db8ee07ce30c11ae84bf3aa7bd0b2220273d33f484d63f761d41a8946c6a0b77a0fb27906c480bcae01ae49b1531ae5cbb
SHA512
538bde12e1e52600a21640d5907f43fcc853c6f3c111880f39eb238093e3d1358ccdfa1f45e944ec8b8e5ee3c2dff269cefe5334db5d73300e6ca327c95520b8
diff --git a/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406.ebuild
b/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406.ebuild
index 6671ed518ff..f7417ab49bf 100644
--- a/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406.ebuild
+++ b/sci-libs/avogadrolibs/avogadrolibs-1.91.0_pre20180406.ebuild
@@ -8,17 +8,21 @@ inherit cmake-utils
DESCRIPTION="Advanced molecule editor and visualizer 2 - libraries"
HOMEPAGE="https://www.openchemistry.org/";
-SRC_URI="https://github.com/OpenChemistry/${PN}/archive/${COMMIT}.tar.gz ->
${P}.tar.gz"
+SRC_URI="https://github.com/OpenChemistry/${PN}/archive/${COMMIT}.tar.gz ->
${P}.tar.gz
+ vtk? (
https://github.com/psavery/genXrdPattern/releases/download/1.0-static/linux64-genXrdPattern
)"
SLOT="0"
LICENSE="BSD GPL-2+"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="archive doc hdf5 qt5 static-plugins test vtk"
+REQUIRED_USE="vtk? ( qt5 )"
+
# TODO: Not yet packaged:
# sci-libs/libmsym (https://github.com/mcodev31/libmsym)
# sci-libs/spglib (https://atztogo.github.io/spglib/)
RDEPEND="
+ dev-libs/jsoncpp:=
>=sci-chemistry/molequeue-0.7
archive? ( app-arch/libarchive )
hdf5? ( sci-libs/hdf5:= )
@@ -29,8 +33,9 @@ RDEPEND="
dev-qt/qtnetwork:5
dev-qt/qtwidgets:5
media-libs/glew:0=
+ virtual/opengl
)
- vtk? ( sci-libs/vtk )
+ vtk? ( sci-libs/vtk[qt5] )
"
DEPEND="${RDEPEND}
dev-cpp/eigen:3
@@ -41,8 +46,17 @@ S="${WORKDIR}/${PN}-${COMMIT}"
PATCHES=(
"${FILESDIR}"/${PN}-0.7.2-6464.patch
"${FILESDIR}/"${P}-underlinking.patch
+ "${FILESDIR}/"${P}-unbundle-jsoncpp.patch
+ "${FILESDIR}/"${P}-bundled-genxrdpattern.patch
)
+src_unpack() {
+ unpack ${P}.tar.gz
+ if use vtk; then
+ cp "${DISTDIR}"/linux64-genXrdPattern
"${WORKDIR}/genXrdPattern" || die
+ fi
+}
+
src_configure() {
local mycmakeargs=(
-DUSE_PROTOCALL=OFF
@@ -60,12 +74,9 @@ src_configure() {
-DENABLE_TESTING=$(usex test)
-DUSE_VTK=$(usex vtk)
)
- cmake-utils_src_configure
-}
-
-src_install() {
- cmake-utils_src_install
+ use vtk && mycmakeargs+=(
+ -DBUNDLED_GENXRDPATTERN="${WORKDIR}/genXrdPattern"
+ )
- # TODO: bundles jsoncpp
- rm "${ED%/}"/usr/lib64/libjsoncpp.a || die
+ cmake-utils_src_configure
}
diff --git
a/sci-libs/avogadrolibs/files/avogadrolibs-1.91.0_pre20180406-bundled-genxrdpattern.patch
b/sci-libs/avogadrolibs/files/avogadrolibs-1.91.0_pre20180406-bundled-genxrdpattern.patch
new file mode 100644
index 000..2072b8fa9b6
--- /dev/null
+++
b/sci-libs/avogadrolibs/files/avogadrolibs-1.91.0_pre20180406-bundled-genxrdpattern.patch
@@ -0,0 +1,44 @@
+From 0287e83eb8706f5237d66873cb6a1b3730891c07 Mon Sep 17 00:00:00 2001
+From: Andreas Sturmlechner
+Date: Sun, 8 Apr 2018 11:21:17 +0200
+Subject: [PATCH] Provide overrideable BUNDLED_
