[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2020-07-17 Thread Mark Wright 
commit: 9a942b9f13c331d304201d35fe1a0f78491291b3
Author: Mark Wright  gentoo  org>
AuthorDate: Fri Jul 17 10:46:53 2020 +
Commit: Mark Wright  gentoo  org>
CommitDate: Fri Jul 17 10:48:00 2020 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9a942b9f

sci-mathematics/rstudio: Bump to rstudio-1.3.1056

Package-Manager: Portage-2.3.103, Repoman-2.3.23
Signed-off-by: Mark Wright  gentoo.org>

 sci-mathematics/rstudio/Manifest   |   1 +
 .../rstudio/files/rstudio-1.3.1056-R-4.0.0.patch   |  58 ++
 .../files/rstudio-1.3.1056-boost-1.74.0.patch  |  30 +++
 sci-mathematics/rstudio/rstudio-1.3.1056.ebuild| 232 +
 4 files changed, 321 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 063f6280255..686f27d6dda 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,4 +1,5 @@
 DIST core-dictionaries.zip 876339 BLAKE2B 
f29afcbf5a7f8ec635e5a5b248d978af286d18488f54c9a09a2b95fde19b796e4473e5846402a46dd24b71c6e4167512539aaa32ab6d99713d500a80aaf46796
 SHA512 
9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9
 DIST rstudio-1.2.5033.tar.gz 20456976 BLAKE2B 
3cbca6a5180690104dddf1456168bd38708d4152ed9b7a167035dd66e270aeb6405169d34461cbd899738be1872607e3f3b6f81ff0b3c9e6a9ed965a889b1393
 SHA512 
3569d4fed342275a9905c87e4f97be63b6391d2c37f75397e06201a7c31f80d94799214f51ff8e57d458ef18d5e54afe1ec8a7c56ac05ed8b8225ecca72d1daf
 DIST rstudio-1.2.5042.tar.gz 20456999 BLAKE2B 
3251ab2511daefefa395256fedb273ecc36dbc8118457474e3647f7616baea91301e597896582ad4b191195fc7baf17645c4c25b9a957a0c17a6251151b1dd87
 SHA512 
e09f2360abecde0c16e240e6838efb270a355bec3d3982ffde2b01b32b21e9281fef465734edbfeb5e05375529cc7f06d5b5d41304f367982f53ae7ad98e20f9
+DIST rstudio-1.3.1056.tar.gz 89584544 BLAKE2B 
0e758ad97f9faa2d3932a49dafd92bc21199a5c0a20e2d8480267ebbb7cd11dc38596b4bb697e04add7bfe6b126f7b2ae6675040a0ac8caca5a5cf737f5ad6eb
 SHA512 
8a9077c2ae021e0cf4cca41b374a50534087b35fd2c1e4b18bdd5ba3672e1ab275046e483ec8a3aba729a8e39f961149fb03a053ea005d8a32873b51201baca2
 DIST rstudio-1.3.959.tar.gz 89639419 BLAKE2B 
d45b2c1b0e426ddb5a945e59a8127ddfd47f6230ef0929639c4b525382ae57437a273df6ade85cfbf3a29911cf0158ee2e0808bfa94e783d70d4615f6c228f31
 SHA512 
e5d8bfe16011790ff4723c731043f44070d8fe48f85c5a9ab8389c9a2b7a1d3813e9362063ec4c6a6ca3b0a0857e2190481cbb74191650a129c0d2e10b342fac

diff --git a/sci-mathematics/rstudio/files/rstudio-1.3.1056-R-4.0.0.patch 
b/sci-mathematics/rstudio/files/rstudio-1.3.1056-R-4.0.0.patch
new file mode 100644
index 000..662089e93a0
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.3.1056-R-4.0.0.patch
@@ -0,0 +1,58 @@
+From 71b1a935762efd24a79de193662450de5a89f67e Mon Sep 17 00:00:00 2001
+From: Jonathan McPherson 
+Date: Tue, 14 Jan 2020 12:53:20 -0800
+Subject: [PATCH] use R_NoSave over R_Slave for R 4.0+
+
+---
+ src/cpp/r/CMakeLists.txt | 12 
+ src/cpp/r/config.h.in|  8 +++-
+ src/cpp/r/session/REmbeddedPosix.cpp | 20 ++--
+ 3 files changed, 33 insertions(+), 7 deletions(-)
+
+diff --git a/src/cpp/r/CMakeLists.txt b/src/cpp/r/CMakeLists.txt
+index 6984ae309c..29784b8b67 100644
+--- a/src/cpp/r/CMakeLists.txt
 b/src/cpp/r/CMakeLists.txt
+@@ -15,6 +15,18 @@
+ 
+ project (R)
+ 
++# find the version of R in play
++find_package(LibR REQUIRED)
++execute_process(
++COMMAND "${LIBR_EXECUTABLE}" "--vanilla" "--slave" "-e" 
"cat(as.character(getRversion()))"
++OUTPUT_VARIABLE LIBR_VERSION)
++
++# parse and save the R version to a variable
++string(REPLACE "." ";" R_VERSION_LIST "${LIBR_VERSION}")
++list(GET R_VERSION_LIST 0 R_VERSION_MAJOR)
++list(GET R_VERSION_LIST 1 R_VERSION_MINOR)
++list(GET R_VERSION_LIST 2 R_VERSION_PATCH)
++
+ # include files
+ file(GLOB_RECURSE R_HEADER_FILES "*.h*")
+ 
+diff --git a/src/cpp/r/config.h.in b/src/cpp/r/config.h.in
+index 6ba67c8e09..00bc8b6191 100644
+--- a/src/cpp/r/config.h.in
 b/src/cpp/r/config.h.in
+@@ -1,7 +1,7 @@
+ /*
+  * config.h.in
+  *
+- * Copyright (C) 2009-12 by RStudio, PBC
++ * Copyright (C) 2009-20 by RStudio, Inc.
+  *
+  * Unless you have received this program directly from RStudio pursuant
+  * to the terms of a commercial license agreement with RStudio, then
+@@ -16,4 +16,10 @@
+ 
+ #cmakedefine PANGO_CAIRO_FOUND
+ 
++// Important: These variables represent the version of R found during
++// compile/link time, NOT the version of R present at runtime.
++#define R_VERSION_MAJOR ${R_VERSION_MAJOR}
++#define R_VERSION_MINOR ${R_VERSION_MINOR}
++#define R_VERSION_PATCH ${R_VERSION_PATCH}
++
+ 

diff --git a/sci-mathematics/rstudio/files/rstudio-1.3.1056-boost-1.74.0.patch 
b/sci-mathematics/rstudio/files/rstudio-1.3.1056-boost-1.74.0.patch
new file mode 100644
index 000..2fde3119e2a
--- /dev/null
+++

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2020-05-25 Thread Mark Wright 
commit: 3baafff326dfe64a021b28d36a48751e81e95c32
Author: Mark Wright  gentoo  org>
AuthorDate: Mon May 25 11:58:49 2020 +
Commit: Mark Wright  gentoo  org>
CommitDate: Mon May 25 11:59:45 2020 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3baafff3

sci-mathematics/rstudio: Bump to 1.3.959

Package-Manager: Portage-2.3.100, Repoman-2.3.22
Signed-off-by: Mark Wright  gentoo.org>

 sci-mathematics/rstudio/Manifest   |   1 +
 .../rstudio/files/rstudio-1.3.959-R-4.0.0.patch| 106 ++
 .../rstudio/files/rstudio-1.3.959-core.patch   | 184 
 .../files/rstudio-1.3.959-pandoc-mathjax.patch |  42 
 .../rstudio/files/rstudio-1.3.959-paths.patch  | 118 +++
 .../rstudio/files/rstudio-1.3.959-prefs.patch  |  68 ++
 .../rstudio-1.3.959-qtsingleapplication.patch  |  60 ++
 sci-mathematics/rstudio/rstudio-1.3.959.ebuild | 231 +
 8 files changed, 810 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 6821cacc59b..063f6280255 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,3 +1,4 @@
 DIST core-dictionaries.zip 876339 BLAKE2B 
f29afcbf5a7f8ec635e5a5b248d978af286d18488f54c9a09a2b95fde19b796e4473e5846402a46dd24b71c6e4167512539aaa32ab6d99713d500a80aaf46796
 SHA512 
9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9
 DIST rstudio-1.2.5033.tar.gz 20456976 BLAKE2B 
3cbca6a5180690104dddf1456168bd38708d4152ed9b7a167035dd66e270aeb6405169d34461cbd899738be1872607e3f3b6f81ff0b3c9e6a9ed965a889b1393
 SHA512 
3569d4fed342275a9905c87e4f97be63b6391d2c37f75397e06201a7c31f80d94799214f51ff8e57d458ef18d5e54afe1ec8a7c56ac05ed8b8225ecca72d1daf
 DIST rstudio-1.2.5042.tar.gz 20456999 BLAKE2B 
3251ab2511daefefa395256fedb273ecc36dbc8118457474e3647f7616baea91301e597896582ad4b191195fc7baf17645c4c25b9a957a0c17a6251151b1dd87
 SHA512 
e09f2360abecde0c16e240e6838efb270a355bec3d3982ffde2b01b32b21e9281fef465734edbfeb5e05375529cc7f06d5b5d41304f367982f53ae7ad98e20f9
+DIST rstudio-1.3.959.tar.gz 89639419 BLAKE2B 
d45b2c1b0e426ddb5a945e59a8127ddfd47f6230ef0929639c4b525382ae57437a273df6ade85cfbf3a29911cf0158ee2e0808bfa94e783d70d4615f6c228f31
 SHA512 
e5d8bfe16011790ff4723c731043f44070d8fe48f85c5a9ab8389c9a2b7a1d3813e9362063ec4c6a6ca3b0a0857e2190481cbb74191650a129c0d2e10b342fac

diff --git a/sci-mathematics/rstudio/files/rstudio-1.3.959-R-4.0.0.patch 
b/sci-mathematics/rstudio/files/rstudio-1.3.959-R-4.0.0.patch
new file mode 100644
index 000..dc35d0ce008
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.3.959-R-4.0.0.patch
@@ -0,0 +1,106 @@
+From 71b1a935762efd24a79de193662450de5a89f67e Mon Sep 17 00:00:00 2001
+From: Jonathan McPherson 
+Date: Tue, 14 Jan 2020 12:53:20 -0800
+Subject: [PATCH] use R_NoSave over R_Slave for R 4.0+
+
+---
+ src/cpp/r/CMakeLists.txt | 12 
+ src/cpp/r/config.h.in|  8 +++-
+ src/cpp/r/session/REmbeddedPosix.cpp | 20 ++--
+ 3 files changed, 33 insertions(+), 7 deletions(-)
+
+diff --git a/src/cpp/r/CMakeLists.txt b/src/cpp/r/CMakeLists.txt
+index 6984ae309c..29784b8b67 100644
+--- a/src/cpp/r/CMakeLists.txt
 b/src/cpp/r/CMakeLists.txt
+@@ -15,6 +15,18 @@
+ 
+ project (R)
+ 
++# find the version of R in play
++find_package(LibR REQUIRED)
++execute_process(
++COMMAND "${LIBR_EXECUTABLE}" "--vanilla" "--slave" "-e" 
"cat(as.character(getRversion()))"
++OUTPUT_VARIABLE LIBR_VERSION)
++
++# parse and save the R version to a variable
++string(REPLACE "." ";" R_VERSION_LIST "${LIBR_VERSION}")
++list(GET R_VERSION_LIST 0 R_VERSION_MAJOR)
++list(GET R_VERSION_LIST 1 R_VERSION_MINOR)
++list(GET R_VERSION_LIST 2 R_VERSION_PATCH)
++
+ # include files
+ file(GLOB_RECURSE R_HEADER_FILES "*.h*")
+ 
+diff --git a/src/cpp/r/config.h.in b/src/cpp/r/config.h.in
+index 6ba67c8e09..00bc8b6191 100644
+--- a/src/cpp/r/config.h.in
 b/src/cpp/r/config.h.in
+@@ -1,7 +1,7 @@
+ /*
+  * config.h.in
+  *
+- * Copyright (C) 2009-12 by RStudio, PBC
++ * Copyright (C) 2009-20 by RStudio, Inc.
+  *
+  * Unless you have received this program directly from RStudio pursuant
+  * to the terms of a commercial license agreement with RStudio, then
+@@ -16,4 +16,10 @@
+ 
+ #cmakedefine PANGO_CAIRO_FOUND
+ 
++// Important: These variables represent the version of R found during
++// compile/link time, NOT the version of R present at runtime.
++#define R_VERSION_MAJOR ${R_VERSION_MAJOR}
++#define R_VERSION_MINOR ${R_VERSION_MINOR}
++#define R_VERSION_PATCH ${R_VERSION_PATCH}
++
+ 
+diff --git a/src/cpp/r/session/REmbeddedPosix.cpp 
b/src/cpp/r/session/REmbeddedPosix.cpp
+index ac71b94522..73e2e2ce7f 100644
+--- a/src/cpp/r/session/REmbeddedPosix.cpp
 b/src/cpp/r/session/REmbeddedPosix.cpp
+@@ -1,7 +1,7 @@
+ /*
+  * REmbeddedPosix.cpp
+  *
+- * Copyright (C) 2009-19 by

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2020-05-23 Thread Mark Wright 
commit: 03406d4343f6bf8e63fcc86bfc6264cdb429fefb
Author: Mark Wright  gentoo  org>
AuthorDate: Sat May 23 12:34:01 2020 +
Commit: Mark Wright  gentoo  org>
CommitDate: Sat May 23 12:42:05 2020 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=03406d43

sci-mathematics/rstudio: Remove old

Package-Manager: Portage-2.3.99, Repoman-2.3.22
Signed-off-by: Mark Wright  gentoo.org>

 sci-mathematics/rstudio/Manifest   |  13 -
 .../files/rstudio-0.98.490-linker_flags.patch  |  18 -
 .../rstudio-0.99.473-qtsingleapplication.patch |  60 ---
 .../rstudio/files/rstudio-0.99.879-prefs.patch |  45 --
 .../rstudio/files/rstudio-1.0.44-paths.patch   | 130 --
 .../files/rstudio-1.1.357-clang-pandoc.patch   |  76 
 .../files/rstudio-1.1.453-boost-1.67.0.patch   |  38 --
 .../rstudio/files/rstudio-1.1.453-core.patch   | 143 ---
 .../files/rstudio-1.1.463-boost-1.69.0_p1.patch| 460 -
 .../files/rstudio-1.1.463-boost-1.69.0_p2.patch| 220 --
 .../files/rstudio-1.1.463-boost-1.69.0_p3.patch| 167 
 .../files/rstudio-1.1.463-boost-1.70.0.patch   |  46 ---
 .../rstudio-1.1.463-fix-ptr-int-compare.patch  |  13 -
 .../rstudio-1.2.1335-boost-1.72-filesystem.patch   |  31 --
 .../rstudio-1.2.1335-fix-ptr-int-compare.patch |  13 -
 .../rstudio/files/rstudio-1.2.1335-pandoc.patch|  32 --
 .../rstudio/files/rstudio-1.2.1335-paths.patch | 118 --
 .../rstudio/files/rstudio-1.2.1335-prefs.patch |  53 ---
 sci-mathematics/rstudio/rstudio-1.1.463-r1.ebuild  | 255 
 sci-mathematics/rstudio/rstudio-1.2.1335.ebuild| 254 
 20 files changed, 2185 deletions(-)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 314a334a3e7..6821cacc59b 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,16 +1,3 @@
-DIST chromedriver-linux 19303552 BLAKE2B 
610396fd74f2adc4c249ca971a53a6dd4ab06145d0b37d59adf66180dfada52192b20203bf3d992c270bd4f787df5c85511ca325aed06cbd9318add3eccfde30
 SHA512 
18774ede961dec222058dd0e3f128d63732cd444ee310136b44d5bf508a4f2f2c164a2c8d195d80bce8b5fb6303559e167f82f384e4a58e30f48b151a4206ee8
 DIST core-dictionaries.zip 876339 BLAKE2B 
f29afcbf5a7f8ec635e5a5b248d978af286d18488f54c9a09a2b95fde19b796e4473e5846402a46dd24b71c6e4167512539aaa32ab6d99713d500a80aaf46796
 SHA512 
9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9
-DIST gin-1.5.zip 1055663 BLAKE2B 
11b86245d54967f0c76f22f7460fb752c410db3c59a019bb538a48fd0de7e87552f2f5bb9ce604e6ed508136a6a2b0814f061161579429daae8ca55b1a448114
 SHA512 
3f6649565f9600daaca6ddf3fb431925b5a1ce1ada38e6389de64cef617abba9d3f49c555d0a20053fb06f17ccbe4e1141b39966fbe4b2975d7b120377504897
-DIST gin-2.1.2.zip 1341053 BLAKE2B 
515338ba50ba2183c101b42183e42ebf15613aae8751a0dcedb4b047de4ca8fab85eb240f5f0c92955441dbb87e80b3edbdae8d83f1e74f74c7de067d18cf108
 SHA512 
03407b6318ffb0dd504ce520649ed90e845f13fbdbd0bfb4d7e3b127842f1735093e39674077c3a04a11d434aefdc3a734652c3f85e8ab00ff37ae760ccb8dbb
-DIST gwt-2.7.0.zip 108818328 BLAKE2B 
9af969f3f2577be041fcfb58f228fab4b5479fa0da5ff054ab0a59cad751590a1b4ae8d7fabc8a50e3b0e5d7eb9b2896c485d929421f75e6a2f6513480438a31
 SHA512 
a1eed5cc25c888cf81d4f22b1f9494d5d8567b911f7aeb1d164a6359120543668280afe1a3ffc9ed87b139c7db67fbcaaabde2066e3279909d7cd6fc22eaf499
-DIST gwt-2.8.1.zip 95650299 BLAKE2B 
3853d50d1346e313903b6f0c4b8405ce9e896e51652483e5c7e9d711daa213e1341c71765b4a3fb061b58f90d49420245963a0480db8b71fe7aed6cd43782c14
 SHA512 
feeb00cb0413c2703dfd6931f57ba669813bd65f814715f2c04dd6dc69e885a8048337272333d7504c48e9fa52cdab699f854ee13211228ab142a1f458ee33ae
-DIST packrat-0.98.1000.tar.gz 97677 BLAKE2B 
282fe33dc5ba366ceea05a222ae2d018bc3ad8f35fad73c585a3d4901c3287e6902277a9c7ca087854f3944bd85ff1b1d1f02869ece686b10f946e2f1cb1296c
 SHA512 
2290c768ecf27a037e73c3f8336b9fd71c68ff19d071b4a8fbc469550d29007cacacdb75f854f73b5db2139a5104f129b85a3612e2ee47bd6118ee13f7d103a6
-DIST rmarkdown-0.98.1000.tar.gz 1423820 BLAKE2B 
eac8c9cf438c9b44ddfe954602dd67a83764b0c988b3ba571877c986b0d5d237059ed6643a86bb404428857ec8c346bfecd12f7cd15cde301cb0ce331f842b7f
 SHA512 
df3540c24c87930fe55bff2ffe67c86c219800cb00ed72ba9451ecd0d0cad411548a78c1a04b9a2e301e853616dcb77e09129c4e48ade6f16d3f14b7ea7e4852
-DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 
BLAKE2B 
1f3f9fe71d7b50ab5108dfdbd3cc0b882bcc935ee58e8a9145b07a18bb86c39bc45e321a13add24df99492bc30548df716775c339bcbf4efc2bfe158299ae55a
 SHA512 
208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade
-DIST rstudio-1.1.463.tar.gz 20203779 BLAKE2B 
97f879539cbb7051af362a8469795a47feb42d18ff46dbbdffe36e0685d1cd5704848b3bf5a5611d482a09567722e35288527302cd521b18e2a48b347c919e17
 SHA512

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2019-08-21 Thread Mark Wright 
commit: cdda9adf72b626d020a063419c1f376755d1b456
Author: Mark Wright  gentoo  org>
AuthorDate: Wed Aug 21 14:03:46 2019 +
Commit: Mark Wright  gentoo  org>
CommitDate: Wed Aug 21 14:03:46 2019 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=cdda9adf

sci-mathematics/rstudio: Bump to 1.2.1335, fix compile with >=boost 1.70.0

Bump, thanks to Neil, Ulenrich, François Valenduc, Thomas Bettler,
Simon Maurer, Bernd Feige and asturm for helping.

Split the rstudio-1.1.463-boost-1.69.0_p?.patch patches into 3 patch files.

Closes: https://bugs.gentoo.org/683050
Closes: https://bugs.gentoo.org/686186
Package-Manager: Portage-2.3.71, Repoman-2.3.17
Signed-off-by: Mark Wright  gentoo.org>

 sci-mathematics/rstudio/Manifest   |   3 +
 .../files/rstudio-1.1.463-boost-1.69.0_p1.patch| 222 +---
 .../files/rstudio-1.1.463-boost-1.69.0_p2.patch| 377 -
 ...patch => rstudio-1.1.463-boost-1.69.0_p3.patch} |   0
 .../files/rstudio-1.1.463-boost-1.70.0.patch   |  46 +++
 .../files/rstudio-1.2.1335-boost-1.70.0_p1.patch   |  46 +++
 .../files/rstudio-1.2.1335-boost-1.70.0_p2.patch   |  17 +
 .../rstudio/files/rstudio-1.2.1335-core.patch  | 160 +
 .../rstudio-1.2.1335-fix-ptr-int-compare.patch |  13 +
 .../files/rstudio-1.2.1335-linker_flags.patch  |  11 +
 .../rstudio/files/rstudio-1.2.1335-pandoc.patch|  32 ++
 .../rstudio/files/rstudio-1.2.1335-paths.patch | 118 +++
 .../rstudio/files/rstudio-1.2.1335-prefs.patch |  53 +++
 .../rstudio-1.2.1335-qtsingleapplication.patch |  60 
 ...io-1.1.463.ebuild => rstudio-1.1.463-r1.ebuild} |  16 +-
 sci-mathematics/rstudio/rstudio-1.1.463.ebuild |   1 +
 ...udio-1.1.463.ebuild => rstudio-1.2.1335.ebuild} |  38 +--
 17 files changed, 804 insertions(+), 409 deletions(-)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 79c6b60ad01..0b00d0f295a 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,13 +1,16 @@
 DIST chromedriver-linux 19303552 BLAKE2B 
610396fd74f2adc4c249ca971a53a6dd4ab06145d0b37d59adf66180dfada52192b20203bf3d992c270bd4f787df5c85511ca325aed06cbd9318add3eccfde30
 SHA512 
18774ede961dec222058dd0e3f128d63732cd444ee310136b44d5bf508a4f2f2c164a2c8d195d80bce8b5fb6303559e167f82f384e4a58e30f48b151a4206ee8
 DIST core-dictionaries.zip 876339 BLAKE2B 
f29afcbf5a7f8ec635e5a5b248d978af286d18488f54c9a09a2b95fde19b796e4473e5846402a46dd24b71c6e4167512539aaa32ab6d99713d500a80aaf46796
 SHA512 
9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9
 DIST gin-1.5.zip 1055663 BLAKE2B 
11b86245d54967f0c76f22f7460fb752c410db3c59a019bb538a48fd0de7e87552f2f5bb9ce604e6ed508136a6a2b0814f061161579429daae8ca55b1a448114
 SHA512 
3f6649565f9600daaca6ddf3fb431925b5a1ce1ada38e6389de64cef617abba9d3f49c555d0a20053fb06f17ccbe4e1141b39966fbe4b2975d7b120377504897
+DIST gin-2.1.2.zip 1341053 BLAKE2B 
515338ba50ba2183c101b42183e42ebf15613aae8751a0dcedb4b047de4ca8fab85eb240f5f0c92955441dbb87e80b3edbdae8d83f1e74f74c7de067d18cf108
 SHA512 
03407b6318ffb0dd504ce520649ed90e845f13fbdbd0bfb4d7e3b127842f1735093e39674077c3a04a11d434aefdc3a734652c3f85e8ab00ff37ae760ccb8dbb
 DIST gwt-2.7.0.zip 108818328 BLAKE2B 
9af969f3f2577be041fcfb58f228fab4b5479fa0da5ff054ab0a59cad751590a1b4ae8d7fabc8a50e3b0e5d7eb9b2896c485d929421f75e6a2f6513480438a31
 SHA512 
a1eed5cc25c888cf81d4f22b1f9494d5d8567b911f7aeb1d164a6359120543668280afe1a3ffc9ed87b139c7db67fbcaaabde2066e3279909d7cd6fc22eaf499
+DIST gwt-2.8.1.zip 95650299 BLAKE2B 
3853d50d1346e313903b6f0c4b8405ce9e896e51652483e5c7e9d711daa213e1341c71765b4a3fb061b58f90d49420245963a0480db8b71fe7aed6cd43782c14
 SHA512 
feeb00cb0413c2703dfd6931f57ba669813bd65f814715f2c04dd6dc69e885a8048337272333d7504c48e9fa52cdab699f854ee13211228ab142a1f458ee33ae
 DIST packrat-0.98.1000.tar.gz 97677 BLAKE2B 
282fe33dc5ba366ceea05a222ae2d018bc3ad8f35fad73c585a3d4901c3287e6902277a9c7ca087854f3944bd85ff1b1d1f02869ece686b10f946e2f1cb1296c
 SHA512 
2290c768ecf27a037e73c3f8336b9fd71c68ff19d071b4a8fbc469550d29007cacacdb75f854f73b5db2139a5104f129b85a3612e2ee47bd6118ee13f7d103a6
 DIST rmarkdown-0.98.1000.tar.gz 1423820 BLAKE2B 
eac8c9cf438c9b44ddfe954602dd67a83764b0c988b3ba571877c986b0d5d237059ed6643a86bb404428857ec8c346bfecd12f7cd15cde301cb0ce331f842b7f
 SHA512 
df3540c24c87930fe55bff2ffe67c86c219800cb00ed72ba9451ecd0d0cad411548a78c1a04b9a2e301e853616dcb77e09129c4e48ade6f16d3f14b7ea7e4852
 DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 
BLAKE2B 
1f3f9fe71d7b50ab5108dfdbd3cc0b882bcc935ee58e8a9145b07a18bb86c39bc45e321a13add24df99492bc30548df716775c339bcbf4efc2bfe158299ae55a
 SHA512 
208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade
 DIST rstudio-1.1.383.tar.gz 20196702 BLAKE2B

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2018-11-19 Thread Mark Wright 
commit: 1ca93847092bdabc213f1631a295decdba82125c
Author: Mark Wright  gentoo  org>
AuthorDate: Mon Nov 19 12:25:51 2018 +
Commit: Mark Wright  gentoo  org>
CommitDate: Mon Nov 19 12:37:56 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1ca93847

sci-mathematics/rstudio: Bump to 1.1.463

Signed-off-by: Mark Wright  gentoo.org>

 sci-mathematics/rstudio/Manifest   |   1 +
 .../files/rstudio-1.1.463-boost-1.69.0_p1.patch| 680 +
 .../files/rstudio-1.1.463-boost-1.69.0_p2.patch| 167 +
 .../rstudio-1.1.463-fix-ptr-int-compare.patch  |  13 +
 sci-mathematics/rstudio/rstudio-1.1.463.ebuild | 253 
 5 files changed, 1114 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 77cc3217237..79c6b60ad01 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -7,6 +7,7 @@ DIST rmarkdown-0.98.1000.tar.gz 1423820 BLAKE2B 
eac8c9cf438c9b44ddfe954602dd67a8
 DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 
BLAKE2B 
1f3f9fe71d7b50ab5108dfdbd3cc0b882bcc935ee58e8a9145b07a18bb86c39bc45e321a13add24df99492bc30548df716775c339bcbf4efc2bfe158299ae55a
 SHA512 
208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade
 DIST rstudio-1.1.383.tar.gz 20196702 BLAKE2B 
5164230a92618e4252269ad0016b200294d1e7fa502cc49aa694486cda098ee7ffc65e6c74a87d891d0532f5cc15d1552aa86d04047d07b4f275cbc4d2758647
 SHA512 
3f637f9bce2c1ad1a4ed3e74287da722190a4e12b0cace6ffcca271977d49dcecca9365f2064366aad94e87851593cab83fa9361e9a9222a9f67fe9451f31ed2
 DIST rstudio-1.1.453.tar.gz 20200360 BLAKE2B 
560b89e53b04356ecf9a02dd8a7e72ad8d6c30bf406fbe7e22a82cc6d33d40e84bececf5ecda9cf086360b2bd2fa64d6b33c2dd675ef5f605f9e825d7ca2dc84
 SHA512 
f2be0866f645007a6f80959109928820c89480057c3660d23e790591797d4f4c371733f49290dae9c81bfc2715821528e2a105e7a66d4d9ffbfc7ee2a596976c
+DIST rstudio-1.1.463.tar.gz 20203779 BLAKE2B 
97f879539cbb7051af362a8469795a47feb42d18ff46dbbdffe36e0685d1cd5704848b3bf5a5611d482a09567722e35288527302cd521b18e2a48b347c919e17
 SHA512 
987347563a9726363c28d866e1372eae8eb19a5cbd0e33c7ee0e0c8f90471c4b69de0f559c00410523841b6c090b584652e01496f5db33c015a4554d2f4e179b
 DIST selenium-java-2.37.0.zip 24625928 BLAKE2B 
b369a805ae96f0d0913c4be42888d9c2a1e213ff982f9daefe73fadb705baa80ab0186ab50ed52609e83697cffaf8d617d06d75405cb8e1c3fe8e7c5b81dba25
 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 DIST selenium-server-standalone-2.37.0.jar 34730734 BLAKE2B 
3899b1d4c5f9153c1f9f13bec66f7c1456ea2e0f34db7d8e54a1ce9063c33a05b3cf95216c2ae06bb40504f72f343a4b9ba6c8553fbbc340e7c18a5b612dde5c
 SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018
 DIST shinyapps-0.98.1000.tar.gz 910095 BLAKE2B 
4f9364692348bb52cbd12cc6ee447841cb0c805327f2518b2a9545920b602b954a98dea68ccb3daf32d2c3bab6464fb15402844d93277193315f1ae7b3ca5190
 SHA512 
3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c

diff --git 
a/sci-mathematics/rstudio/files/rstudio-1.1.463-boost-1.69.0_p1.patch 
b/sci-mathematics/rstudio/files/rstudio-1.1.463-boost-1.69.0_p1.patch
new file mode 100644
index 000..aa3db25f3c0
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.1.463-boost-1.69.0_p1.patch
@@ -0,0 +1,680 @@
+--- /dev/null  2018-11-10 15:32:26.332997437 +1100
 rstudio-1.1.463/src/cpp/core/include/core/BoostSignals.hpp 2018-11-17 
21:24:35.285976284 +1100
+@@ -0,0 +1,40 @@
++/*
++ * BoostSignals.hpp
++ *
++ * Copyright (C) 2009-18 by RStudio, Inc.
++ *
++ * Unless you have received this program directly from RStudio pursuant
++ * to the terms of a commercial license agreement with RStudio, then
++ * this program is licensed to you under the terms of version 3 of the
++ * GNU Affero General Public License. This program is distributed WITHOUT
++ * ANY EXPRESS OR IMPLIED WARRANTY, INCLUDING THOSE OF NON-INFRINGEMENT,
++ * MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. Please refer to the
++ * AGPL (http://www.gnu.org/licenses/agpl-3.0.txt) for more details.
++ *
++ */
++
++#ifndef CORE_RSTUDIO_BOOST_SIGNALS_HPP
++#define CORE_RSTUDIO_BOOST_SIGNALS_HPP
++
++#if RSTUDIO_BOOST_SIGNALS_VERSION == 1
++
++# include 
++# define RSTUDIO_BOOST_SIGNAL boost::signal
++# define RSTUDIO_BOOST_CONNECTION boost::signals::connection
++# define RSTUDIO_BOOST_SCOPED_CONNECTION boost::signals::scoped_connection
++# define RSTUDIO_BOOST_LAST_VALUE boost::last_value
++
++#elif RSTUDIO_BOOST_SIGNALS_VERSION == 2
++
++# include 
++# define RSTUDIO_BOOST_SIGNAL boost::signals2::signal
++# define RSTUDIO_BOOST_CONNECTION boost::signals2::connection
++# define RSTUDIO_BOOST_SCOPED_CONNECTION

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2018-07-02 Thread Mark Wright 
commit: 07ba37d27c35a88152a5f413289892c47b8325c6
Author: Mark Wright  gentoo  org>
AuthorDate: Tue Jul  3 02:09:07 2018 +
Commit: Mark Wright  gentoo  org>
CommitDate: Tue Jul  3 02:38:40 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=07ba37d2

sci-mathematics/rstudio: Bump to 1.1.453

Thanks to John Dough for reporting 652116.
Thanks to Harris Landgarten for reporting 626056.
Closes https://bugs.gentoo.org/652116
Closes https://bugs.gentoo.org/626056

 sci-mathematics/rstudio/Manifest   |   1 +
 .../files/rstudio-1.1.453-boost-1.67.0.patch   |  38 
 .../rstudio/files/rstudio-1.1.453-core.patch   | 143 
 sci-mathematics/rstudio/rstudio-1.1.453.ebuild | 249 +
 4 files changed, 431 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 68418950fa6..77cc3217237 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -6,6 +6,7 @@ DIST packrat-0.98.1000.tar.gz 97677 BLAKE2B 
282fe33dc5ba366ceea05a222ae2d018bc3a
 DIST rmarkdown-0.98.1000.tar.gz 1423820 BLAKE2B 
eac8c9cf438c9b44ddfe954602dd67a83764b0c988b3ba571877c986b0d5d237059ed6643a86bb404428857ec8c346bfecd12f7cd15cde301cb0ce331f842b7f
 SHA512 
df3540c24c87930fe55bff2ffe67c86c219800cb00ed72ba9451ecd0d0cad411548a78c1a04b9a2e301e853616dcb77e09129c4e48ade6f16d3f14b7ea7e4852
 DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 
BLAKE2B 
1f3f9fe71d7b50ab5108dfdbd3cc0b882bcc935ee58e8a9145b07a18bb86c39bc45e321a13add24df99492bc30548df716775c339bcbf4efc2bfe158299ae55a
 SHA512 
208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade
 DIST rstudio-1.1.383.tar.gz 20196702 BLAKE2B 
5164230a92618e4252269ad0016b200294d1e7fa502cc49aa694486cda098ee7ffc65e6c74a87d891d0532f5cc15d1552aa86d04047d07b4f275cbc4d2758647
 SHA512 
3f637f9bce2c1ad1a4ed3e74287da722190a4e12b0cace6ffcca271977d49dcecca9365f2064366aad94e87851593cab83fa9361e9a9222a9f67fe9451f31ed2
+DIST rstudio-1.1.453.tar.gz 20200360 BLAKE2B 
560b89e53b04356ecf9a02dd8a7e72ad8d6c30bf406fbe7e22a82cc6d33d40e84bececf5ecda9cf086360b2bd2fa64d6b33c2dd675ef5f605f9e825d7ca2dc84
 SHA512 
f2be0866f645007a6f80959109928820c89480057c3660d23e790591797d4f4c371733f49290dae9c81bfc2715821528e2a105e7a66d4d9ffbfc7ee2a596976c
 DIST selenium-java-2.37.0.zip 24625928 BLAKE2B 
b369a805ae96f0d0913c4be42888d9c2a1e213ff982f9daefe73fadb705baa80ab0186ab50ed52609e83697cffaf8d617d06d75405cb8e1c3fe8e7c5b81dba25
 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 DIST selenium-server-standalone-2.37.0.jar 34730734 BLAKE2B 
3899b1d4c5f9153c1f9f13bec66f7c1456ea2e0f34db7d8e54a1ce9063c33a05b3cf95216c2ae06bb40504f72f343a4b9ba6c8553fbbc340e7c18a5b612dde5c
 SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018
 DIST shinyapps-0.98.1000.tar.gz 910095 BLAKE2B 
4f9364692348bb52cbd12cc6ee447841cb0c805327f2518b2a9545920b602b954a98dea68ccb3daf32d2c3bab6464fb15402844d93277193315f1ae7b3ca5190
 SHA512 
3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c

diff --git a/sci-mathematics/rstudio/files/rstudio-1.1.453-boost-1.67.0.patch 
b/sci-mathematics/rstudio/files/rstudio-1.1.453-boost-1.67.0.patch
new file mode 100644
index 000..760c9b56105
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.1.453-boost-1.67.0.patch
@@ -0,0 +1,38 @@
+--- rstudio-1.1.453-orig/src/cpp/core/DateTime.cpp 2018-05-15 
04:19:30.0 +1000
 rstudio-1.1.453/src/cpp/core/DateTime.cpp  2018-07-02 16:19:21.335703471 
+1000
+@@ -65,7 +65,7 @@
+using namespace boost::posix_time;
+ 
+ptime time_t_epoch(date(1970,1,1));
+-   return time_t_epoch + seconds(sec);
++   return time_t_epoch + seconds(static_cast(sec));
+ }
+ 
+ boost::posix_time::ptime timeFromMillisecondsSinceEpoch(int64_t ms)
+--- rstudio-1.1.453-orig/src/cpp/core/file_lock/FileLock.cpp   2018-05-15 
04:19:30.0 +1000
 rstudio-1.1.453/src/cpp/core/file_lock/FileLock.cpp2018-07-02 
17:00:35.915695201 +1000
+@@ -133,11 +133,11 @@
+ 
+// timeout interval
+double timeoutInterval = getFieldPositive(settings, "timeout-interval", 
kDefaultTimeoutInterval);
+-   FileLock::s_timeoutInterval = boost::posix_time::seconds(timeoutInterval);
++   FileLock::s_timeoutInterval = 
boost::posix_time::seconds(static_cast(timeoutInterval));
+
+// refresh rate
+double refreshRate = getFieldPositive(settings, "refresh-rate", 
kDefaultRefreshRate);
+-   FileLock::s_refreshRate = boost::posix_time::seconds(refreshRate);
++   FileLock::s_refreshRate = 
boost::posix_time::seconds(static_cast(refreshRate));
+
+// logging
+bool loggingEnabled =

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2018-05-03 Thread Andreas Sturmlechner 
commit: 501d7bfb446a299cd64c67eec0ba789e79004ac9
Author: Andreas Sturmlechner  gentoo  org>
AuthorDate: Thu May  3 11:48:42 2018 +
Commit: Andreas Sturmlechner  gentoo  org>
CommitDate: Thu May  3 11:48:42 2018 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=501d7bfb

sci-mathematics/rstudio: Drop old

Package-Manager: Portage-2.3.33, Repoman-2.3.9

 sci-mathematics/rstudio/Manifest   |   1 -
 .../files/rstudio-0.98.1091-boost-1.57.patch   |  60 -
 sci-mathematics/rstudio/rstudio-1.1.368.ebuild | 248 -
 3 files changed, 309 deletions(-)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 41930c74cdf..68418950fa6 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -5,7 +5,6 @@ DIST gwt-2.7.0.zip 108818328 BLAKE2B 
9af969f3f2577be041fcfb58f228fab4b5479fa0da5
 DIST packrat-0.98.1000.tar.gz 97677 BLAKE2B 
282fe33dc5ba366ceea05a222ae2d018bc3ad8f35fad73c585a3d4901c3287e6902277a9c7ca087854f3944bd85ff1b1d1f02869ece686b10f946e2f1cb1296c
 SHA512 
2290c768ecf27a037e73c3f8336b9fd71c68ff19d071b4a8fbc469550d29007cacacdb75f854f73b5db2139a5104f129b85a3612e2ee47bd6118ee13f7d103a6
 DIST rmarkdown-0.98.1000.tar.gz 1423820 BLAKE2B 
eac8c9cf438c9b44ddfe954602dd67a83764b0c988b3ba571877c986b0d5d237059ed6643a86bb404428857ec8c346bfecd12f7cd15cde301cb0ce331f842b7f
 SHA512 
df3540c24c87930fe55bff2ffe67c86c219800cb00ed72ba9451ecd0d0cad411548a78c1a04b9a2e301e853616dcb77e09129c4e48ade6f16d3f14b7ea7e4852
 DIST rsconnect_0.4.1.4_fcac892a69817febd7b655b189bf57193260cda0.tar.gz 197051 
BLAKE2B 
1f3f9fe71d7b50ab5108dfdbd3cc0b882bcc935ee58e8a9145b07a18bb86c39bc45e321a13add24df99492bc30548df716775c339bcbf4efc2bfe158299ae55a
 SHA512 
208dc349f4aa7613ecf94939aba60d22d3a06972344b526c9b6c951015571f5922927bca08db571a7b8a268e42609a4f558f01278c9685f6da2ffc66a1f95ade
-DIST rstudio-1.1.368.tar.gz 20197144 BLAKE2B 
c97a86faa28b40552539eebc4faeec8a4199df6972efc2b112a2af08e47982e41b7cd92a6f06d14411dd67c21efa632ab017d99d28c1521f90b6075ed0232ce0
 SHA512 
39cdf583d7dcd22338916cc0ea4f90681580e41663b2d3e04b2e650759c6b030c85ee111cdfe1f717f931932a9b7ca423a21585d69a785f056f754f6d50399a1
 DIST rstudio-1.1.383.tar.gz 20196702 BLAKE2B 
5164230a92618e4252269ad0016b200294d1e7fa502cc49aa694486cda098ee7ffc65e6c74a87d891d0532f5cc15d1552aa86d04047d07b4f275cbc4d2758647
 SHA512 
3f637f9bce2c1ad1a4ed3e74287da722190a4e12b0cace6ffcca271977d49dcecca9365f2064366aad94e87851593cab83fa9361e9a9222a9f67fe9451f31ed2
 DIST selenium-java-2.37.0.zip 24625928 BLAKE2B 
b369a805ae96f0d0913c4be42888d9c2a1e213ff982f9daefe73fadb705baa80ab0186ab50ed52609e83697cffaf8d617d06d75405cb8e1c3fe8e7c5b81dba25
 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 DIST selenium-server-standalone-2.37.0.jar 34730734 BLAKE2B 
3899b1d4c5f9153c1f9f13bec66f7c1456ea2e0f34db7d8e54a1ce9063c33a05b3cf95216c2ae06bb40504f72f343a4b9ba6c8553fbbc340e7c18a5b612dde5c
 SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018

diff --git a/sci-mathematics/rstudio/files/rstudio-0.98.1091-boost-1.57.patch 
b/sci-mathematics/rstudio/files/rstudio-0.98.1091-boost-1.57.patch
deleted file mode 100644
index 3a157183c22..000
--- a/sci-mathematics/rstudio/files/rstudio-0.98.1091-boost-1.57.patch
+++ /dev/null
@@ -1,60 +0,0 @@
 rstudio-0.98.1091-orig/src/cpp/desktop/DesktopApplicationLaunch.hpp
2014-11-06 23:15:47.0 +1100
-+++ rstudio-0.98.1091/src/cpp/desktop/DesktopApplicationLaunch.hpp 
2015-02-28 14:01:51.970672316 +1100
-@@ -19,7 +19,10 @@
- #include 
- #include 
- #include 
-+// see https://bugreports.qt-project.org/browse/QTBUG-22829
-+#ifndef Q_MOC_RUN
- #include 
-+#endif
- 
- namespace desktop {
- 
 rstudio-0.98.1091-orig/src/cpp/desktop/DesktopSessionLauncher.hpp  
2014-11-06 23:15:47.0 +1100
-+++ rstudio-0.98.1091/src/cpp/desktop/DesktopSessionLauncher.hpp   
2015-02-28 14:01:51.972672316 +1100
-@@ -18,7 +18,10 @@
- 
- #include 
- 
-+// see https://bugreports.qt-project.org/browse/QTBUG-22829
-+#ifndef Q_MOC_RUN
- #include 
-+#endif
- 
- #include 
- #include 
 rstudio-0.98.1091-orig/src/cpp/core/include/core/FilePath.hpp  
2014-11-06 23:15:47.0 +1100
-+++ rstudio-0.98.1091/src/cpp/core/include/core/FilePath.hpp   2015-02-28 
14:01:51.984672314 +1100
-@@ -23,11 +23,14 @@
- #include 
- #include 
- 
-+// see https://bugreports.qt-project.org/browse/QTBUG-22829
-+#ifndef Q_MOC_RUN
- #include 
- #include 
- #include 
- 
- #include 
-+#endif
- 
- #include 
- #include 
 rstudio-0.98.1091-orig/src/cpp/core/include/core/Error.hpp 2014-11-06 
23:15:47.0 +1100
-+++ rstudio-0.98.1091/src/cpp/core/include/core/Error.hpp  2015-02-28 
14:01:51.977672315 +1100
-@@ -20,11 +20,14 @@
- #include 
- #include 
- 
-+// see

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2017-10-24 Thread Mark Wright 
commit: a36219a050e6d671f2c796191b1273153b640a35
Author: Sobhan Mohammadpour  gmail  com>
AuthorDate: Mon Oct 23 12:28:39 2017 +
Commit: Mark Wright  gentoo  org>
CommitDate: Tue Oct 24 06:46:05 2017 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a36219a0

sci-mathematics/rstudio: version bump to 1.1.368

Bump to 1.1.368. This also updates the clang pandoc patch
Fixes bug 626056, thanks to Harris Landgarten for reporting, Sobhan
Mohammadpour for adding the missing dependency in 1.1.383.
Fixes bug 626062 by bumping rstudio to version 1.1.383 that builds with R 3.4.
Thanks to Harris Landgarten for reporting, jstein, Volkmar Glauche, Bernd
Feige and yuri for testing and helping, Sobhan Mohammadpour for bumping
rstudio in PR #6003.
Fixes bug 622254, thanks to jstein for reporting, Volkmar Glauche, Bernd Feige,
Carl W. Harlow, Rolf S. Arvidson, Oleg, Alex and Sobhan Mohammadpour for
testing and helping.
Fixes bug 633936, thanks to Neil for reporting, François Valenduc and Bernd
for helping.

Suggested-by: Bernd Feige  gmx.net>
Gentoo-bug: 626056, 626062. 622254, 633936

 sci-mathematics/rstudio/Manifest   |   1 +
 .../files/rstudio-1.1.357-clang-pandoc.patch   |  76 +++
 sci-mathematics/rstudio/rstudio-1.1.368.ebuild | 248 +
 3 files changed, 325 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 728e003ec65..5d4b2fdc369 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -20,6 +20,7 @@ DIST rstudio-1.0.136.tar.gz 17786389 SHA256 
bb6a8aa475e09dd090cd2b5ea505f578d270
 DIST rstudio-1.0.143.tar.gz 17791067 SHA256 
8ae88731b4474e5e2ff9030aa14e168903fe3a7ffc4fa716f497084a86801062 SHA512 
46eaa88dd8332f18bb3a43de6e262d8a365860d9add78aea6a2d345784b239972c9c73bf0b56f1736b2981b8f688dbaf5a83c6848d170c0cf61d0e51dd636a82
 WHIRLPOOL 
db1c11be240db3528e46d359c7d40d64068dfe5f7d915c4a6b690444f7f7fbc11f3898a6e262fa625bfab906f0cbfb2a8e3288a4fd20470423a99d992972fcda
 DIST rstudio-1.0.153.tar.gz 17790922 SHA256 
79b90e21e56b114e28b03fd8543a208c55bb9d5f47a87fd29143d08b9a06f7a0 SHA512 
d970a9bde88845e3fc6cdaff5233ffb65c03939c685c3fca0dd052246e065c7580b3f9bc4e053a79d2ecbb5f8c283d3fce7b97cc69e43176bd49587c736dab86
 WHIRLPOOL 
c1f4c7bdc8e5a85af53411a35d736278b83f4732d2e273378fecc77cb075dff507147d56012682564edd58041c91cc051189eb38a7348d0827b76c7ac37bd54d
 DIST rstudio-1.0.44.tar.gz 17774065 SHA256 
43ece6cfdd1a13ac0e17f2a50154a30a1a14ad6c1b3cf381cc6007988ce44a0f SHA512 
a8b975dc517125a257e5f61db5bb137e133b02d738d3770aa65e388cd112ce646b53b77dc069d1ca95ccd95979f4a57ad60b99fc3b91543cf61e737e8169
 WHIRLPOOL 
4ad472aed130451e81d8d8e3251d3bbd701a8b8e2fbddf17dc357f39335e33c75505f9443c2c7208e60a19c2767b9328134433e5d4fd22504813020712c658ef
+DIST rstudio-1.1.368.tar.gz 20197144 SHA256 
586573707a488b5f528680b932ba5f8ea6d07667cc5ae6426104e2abf5ddab75 SHA512 
39cdf583d7dcd22338916cc0ea4f90681580e41663b2d3e04b2e650759c6b030c85ee111cdfe1f717f931932a9b7ca423a21585d69a785f056f754f6d50399a1
 WHIRLPOOL 
e18ff21823638d458179819e0b0b234b80be2f095f5b7bf5b9ac0190b078f0d7acb51e8896cbfcf1ce33cd203ed4e9fbe097aac6eee62515cace1d2f08c08219
 DIST selenium-java-2.37.0.zip 24625928 SHA256 
0eebba65d8edb01c1f46e462907c58f5d6e1cb0ddf63660a9985c8432bdffbb7 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 WHIRLPOOL 
eb6659aae26f3c78b6f998546b23d0636c9d00ed8a7f985db1463ac4bd483ccb3e643d84e2ca0f59e0636a8de79eb552ff1d68eb6f9c06907029f7552d8f
 DIST selenium-server-standalone-2.37.0.jar 34730734 SHA256 
97bc8c699037fb6e99ba7af570fb60dbb1b7ce30cde2448287a44ef65b13023e SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018
 WHIRLPOOL 
20640591534f31f24825a9ed139589b182e8b60d86541bf0be104d3cc0280983f6566bd0459f2253ac3875b48a2798b205bac8f815a119fff6db625ce9bbc29e
 DIST shinyapps-0.98.1000.tar.gz 910095 SHA256 
b95c512ae0a0fb4335878d9cfcf9073e2cb3ccfed73543abe27ea8878ed36d57 SHA512 
3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c
 WHIRLPOOL 
ecc2bce78387cb42e9989163d8fca29220e66f085acde3323417058aebb624dafa8c0e1873c7d79e67324cbd5aad250ef9fcdbbc8f659d64482233b95d898a15

diff --git a/sci-mathematics/rstudio/files/rstudio-1.1.357-clang-pandoc.patch 
b/sci-mathematics/rstudio/files/rstudio-1.1.357-clang-pandoc.patch
new file mode 100644
index 000..28b0220912a
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.1.357-clang-pandoc.patch
@@ -0,0 +1,76 @@
+Index: rstudio-1.1.357/src/cpp/session/CMakeLists.txt
+===
+--- rstudio-1.1.357.orig/src/cpp/session/CMakeLists.txt
 rstudio-1.1.357/src/cpp/session/CMakeLists.txt
+@@ -25,9 +25,6 @@ endif()
+ if(NOT EXISTS

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2017-10-15 Thread Andreas Sturmlechner 
commit: 679cc5c1a355784caac199f88a5dcfb84c6d6b06
Author: Andreas Sturmlechner  gentoo  org>
AuthorDate: Sat Oct 14 21:16:37 2017 +
Commit: Andreas Sturmlechner  gentoo  org>
CommitDate: Sun Oct 15 12:22:41 2017 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=679cc5c1

sci-mathematics/rstudio: Drop old, Qt4WebKit rdeps

Gentoo-bug: 526660, 583100, 608134, 634280
Package-Manager: Portage-2.3.11, Repoman-2.3.3

 sci-mathematics/rstudio/Manifest   |  12 --
 .../files/rstudio-0.97.336-boost-1.53.patch|  64 ---
 .../files/rstudio-0.97.336-linker_flags.patch  |  18 --
 .../rstudio/files/rstudio-0.97.336-paths.patch | 112 
 .../rstudio/files/rstudio-0.97.336-prefs.patch |  24 ---
 .../files/rstudio-0.97.551-boost-1.53.patch|  64 ---
 .../files/rstudio-0.97.551-linker_flags.patch  |  18 --
 .../rstudio/files/rstudio-0.97.551-paths.patch | 112 
 .../rstudio/files/rstudio-0.97.551-prefs.patch |  24 ---
 sci-mathematics/rstudio/rstudio-0.97.336.ebuild| 143 ---
 sci-mathematics/rstudio/rstudio-0.97.551.ebuild| 143 ---
 sci-mathematics/rstudio/rstudio-0.98.1028.ebuild   | 164 -
 sci-mathematics/rstudio/rstudio-0.98.1091.ebuild   | 198 -
 sci-mathematics/rstudio/rstudio-0.98.490-r1.ebuild | 129 --
 sci-mathematics/rstudio/rstudio-0.98.490.ebuild| 142 ---
 sci-mathematics/rstudio/rstudio-0.98.932.ebuild| 173 --
 sci-mathematics/rstudio/rstudio-0.98.953.ebuild| 174 --
 17 files changed, 1714 deletions(-)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index f742b19bb98..728e003ec65 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -1,22 +1,10 @@
 DIST chromedriver-linux 19303552 SHA256 
1ff3e9fc17e456571c440ab160f25ee451b2a4d36e61c8e297737cff7433f48c SHA512 
18774ede961dec222058dd0e3f128d63732cd444ee310136b44d5bf508a4f2f2c164a2c8d195d80bce8b5fb6303559e167f82f384e4a58e30f48b151a4206ee8
 WHIRLPOOL 
06534c131d3a8ade4fb12ad94955f430f23d86654342357d223e78e210cc401416361a847934bccb3957702bbe8fc8a6dd7f18416461edf486145bde96c7091e
 DIST core-dictionaries.zip 876339 SHA256 
4341a9630efb9dcf7f215c324136407f3b3d6003e1c96f2e5e1f9f14d5787494 SHA512 
9c5830cc9fed575e223f1c61f02e48c5aea6801bb0cd2586f02437c17fdffdb1d36c396d5a8ecbe02ba01196e73458304345b1f6b92c052bc7a7d05961fac2c9
 WHIRLPOOL 
316dced8ac46e4216613b0b850c33d4c1e10ef0ecd954d786eb131ea80b34e66ba3d39a0ef25b45230b64ded415737ddabef8f7d68f4d42caea98679cff44ee0
 DIST gin-1.5.zip 1055663 SHA256 
f561f4eb5d5fe1cff95c881e6aed53a86e9f0de8a52863295a8600375f96ab94 SHA512 
3f6649565f9600daaca6ddf3fb431925b5a1ce1ada38e6389de64cef617abba9d3f49c555d0a20053fb06f17ccbe4e1141b39966fbe4b2975d7b120377504897
 WHIRLPOOL 
e66d348ed275eb20518369c39592a5a03ee4257422e2947520385377939de65a54d131332818362a47597392026db48ed1332f11ae218e336798498ae5d5b196
-DIST gwt-2.5.0.rc1.zip 104156555 SHA256 
83a6dec583d1b7f3bf3fd2e321d89c1d95881eed1f81c7ea4056201fc105258b SHA512 
c0c4f502b4ca191537eada53eb0458c0d33282661423f6d2648e6107ed8e38465b189377fcd0d9babcbf2c688e16080d33cbd7165ed20dafda7fedc39a74e163
 WHIRLPOOL 
b37f12d1937b6479b97e274a59a1856dcf0c5cc3b767b6a19f65d7807e1f32cc2483358f1414c4c9e427d890eb1e0617fe8af84c6f0dca4a9ded64ae5ffde129
-DIST gwt-2.5.1.zip 111070580 SHA256 
c457df45a3eed582452c5784ed11746685df494c0ffe4a8ae4de52945916593a SHA512 
845c6bc6ce5ade57eeddd8b40cc3458f5e7d40d881cb4017615897eebd5349bfecfef8cd3e3b05a09b33ecf9ee0262d4a84700b0965a27b40cb60d701457a7ea
 WHIRLPOOL 
9d820026e97f96402fc6b69a06f24d2f79df830a0afdba808ab98f14a32312bc999692ad5822005acf6fdcd1b4261918a318f9f20980c640cf32292d5df83a05
-DIST gwt-2.6.0.zip 108819959 SHA256 
bd4c13a5d1078446d519a742ee233971e55c447d1b87ffd5b1f90e54dd876b9a SHA512 
40690f83f6271ab58abf0ccbf2da1045ea142867ed88accdce91f65a70e39ecf48070696caffcab3f797523ee69b0431b67155b7f04c2856cd95856a7e20d2fb
 WHIRLPOOL 
d59ce0f9b13a9956b07905479b394397020fcbc85ac3aabff9ebd74d39b7e660c862e7fe1adb32160e82186d83db10d1254121846e1a9bdafacc38efc55a38fd
 DIST gwt-2.7.0.zip 108818328 SHA256 
aa65061b73836190410720bea422eb8e787680d7bc0c2b244ae6c9a0d24747b3 SHA512 
a1eed5cc25c888cf81d4f22b1f9494d5d8567b911f7aeb1d164a6359120543668280afe1a3ffc9ed87b139c7db67fbcaaabde2066e3279909d7cd6fc22eaf499
 WHIRLPOOL 
96ca3c3bd39116fd6109a3e436f41875b6e3343596165d2a7941a961562f5ebd412f0a455d57fc47a9551d0ba76df172a4ad2622500715625faa325d94f3d961
 DIST packrat-0.98.1000.tar.gz 97677 SHA256 
c2da99ea6b62fd460f36b76f6c9b91865c42851545d61817c181bf6109e2df6b SHA512 
2290c768ecf27a037e73c3f8336b9fd71c68ff19d071b4a8fbc469550d29007cacacdb75f854f73b5db2139a5104f129b85a3612e2ee47bd6118ee13f7d103a6
 WHIRLPOOL 
a2d0c3c3e04cbc496f59abbf1065fcd0b7ae25433ce0b7ca8e75ab59362f320508537b2a62ed1028dd5baad6cbab5ef2e91dd9d3af327bbd04c08a96c57d80f4
-DIST packrat_0.3.0.tar.gz 79974 SHA256

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2016-12-01 Thread Mark Wright 
commit: 9b2645061cdbc30b2a6bfaab0937083c91655070
Author: Mark Wright  gentoo  org>
AuthorDate: Fri Dec  2 01:06:31 2016 +
Commit: Mark Wright  gentoo  org>
CommitDate: Fri Dec  2 01:07:09 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9b264506

sci-mathematics/rstudio: Bump to 1.0.44, thanks to David Luna for reporting.

Gentoo-Bug: 599282

Package-Manager: portage-2.3.2

 sci-mathematics/rstudio/Manifest   |   1 +
 .../files/rstudio-1.0.44-clang-pandoc.patch|  71 ++
 .../rstudio/files/rstudio-1.0.44-paths.patch   | 130 +++
 .../rstudio/files/rstudio-1.0.44-systemd.patch |  21 ++
 sci-mathematics/rstudio/rstudio-1.0.44.ebuild  | 248 +
 5 files changed, 471 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index 8ff2707..26d0c77 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -28,6 +28,7 @@ DIST rstudio-0.99.893.tar.gz 17407634 SHA256 
90a657b1fa16cfc575ca884789bac47f178
 DIST rstudio-0.99.896.tar.gz 17409121 SHA256 
05fc7546ad1d21d7e6219538056ec2ee1b86d09b731a588198ce137d3fe25bae SHA512 
c62df2a1c54f8c6d14b1239dd746b88693c11c48ec56aa5ae89023e98901793b0e65df44526cbc8c71036c0f73a512767cae086ed3777540b1ceda05e3398e17
 WHIRLPOOL 
7f4d0ebc8db509f09ccc15da02a4a426de431312f2dc65126bda76e11de0e106671fc7a83e9ea8e66b88f81268d0db8b44014a70744b30641bb58bedda73427d
 DIST rstudio-0.99.902.tar.gz 17408815 SHA256 
703a3ebedbb4bb44d2cacffed2615b4f65156fcd4115029931eb5fd99950c689 SHA512 
23db68f05900666287901d75f02006f7edacafab057d82a312b4e5aac639ef4b5db702420632f2768e509411bbfc73c32a533aa0f1b33379c10df82e009b974e
 WHIRLPOOL 
e7ef3cf0d9a414257c4c0c68809c674721f9513917bd450c9946133ee69dd735374417483c7dc380ee4d387119558c961d4ea815aac5bcd3fa22ee863556e0a4
 DIST rstudio-0.99.903.tar.gz 17409865 SHA256 
8902fe7a6f7f6e0d6e8fae2472e479bb9cbe9cbb2e0747e5f01a093d31993a3c SHA512 
9ddcfdab187c907dfa3cbf386ee902b43ba35c242b44a4190c58d1e3bad590ca428209423739768b57f759c4bde61ef2b5958fb3cba366d7740753c3c5dbf739
 WHIRLPOOL 
82ca64883d02aacc0c1081779f769c3ea2bbac3c370f1e62fba18465547742114df18d431f30c3fe449c0ae2ac212cd7dd98a72bb2e5810eb1fc6cdbb3c82a69
+DIST rstudio-1.0.44.tar.gz 17774065 SHA256 
43ece6cfdd1a13ac0e17f2a50154a30a1a14ad6c1b3cf381cc6007988ce44a0f SHA512 
a8b975dc517125a257e5f61db5bb137e133b02d738d3770aa65e388cd112ce646b53b77dc069d1ca95ccd95979f4a57ad60b99fc3b91543cf61e737e8169
 WHIRLPOOL 
4ad472aed130451e81d8d8e3251d3bbd701a8b8e2fbddf17dc357f39335e33c75505f9443c2c7208e60a19c2767b9328134433e5d4fd22504813020712c658ef
 DIST selenium-java-2.37.0.zip 24625928 SHA256 
0eebba65d8edb01c1f46e462907c58f5d6e1cb0ddf63660a9985c8432bdffbb7 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 WHIRLPOOL 
eb6659aae26f3c78b6f998546b23d0636c9d00ed8a7f985db1463ac4bd483ccb3e643d84e2ca0f59e0636a8de79eb552ff1d68eb6f9c06907029f7552d8f
 DIST selenium-server-standalone-2.37.0.jar 34730734 SHA256 
97bc8c699037fb6e99ba7af570fb60dbb1b7ce30cde2448287a44ef65b13023e SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018
 WHIRLPOOL 
20640591534f31f24825a9ed139589b182e8b60d86541bf0be104d3cc0280983f6566bd0459f2253ac3875b48a2798b205bac8f815a119fff6db625ce9bbc29e
 DIST shinyapps-0.98.1000.tar.gz 910095 SHA256 
b95c512ae0a0fb4335878d9cfcf9073e2cb3ccfed73543abe27ea8878ed36d57 SHA512 
3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c
 WHIRLPOOL 
ecc2bce78387cb42e9989163d8fca29220e66f085acde3323417058aebb624dafa8c0e1873c7d79e67324cbd5aad250ef9fcdbbc8f659d64482233b95d898a15

diff --git a/sci-mathematics/rstudio/files/rstudio-1.0.44-clang-pandoc.patch 
b/sci-mathematics/rstudio/files/rstudio-1.0.44-clang-pandoc.patch
new file mode 100644
index ..ed0fc8e
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-1.0.44-clang-pandoc.patch
@@ -0,0 +1,71 @@
+--- rstudio-1.0.44-orig/src/cpp/session/CMakeLists.txt 2016-10-19 
08:32:41.0 +1100
 rstudio-1.0.44/src/cpp/session/CMakeLists.txt  2016-12-01 
23:44:30.130725331 +1100
+@@ -25,24 +25,6 @@
+ if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/mathjax-26")
+   message(FATAL_ERROR "Mathjax 2.6 not found (re-run install-dependencies 
script to install)")
+ endif()
+-if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/pandoc")
+-  message(FATAL_ERROR "pandoc not found (re-run install-dependencies script 
to install)")
+-endif()
+-
+-# verify libclang is installed
+-if(WIN32)
+-   set(LIBCLANG_VERSION "3.4")
+-else()
+-   set(LIBCLANG_VERSION "3.5")
+-endif()
+-set(LIBCLANG_DIR 
"${RSTUDIO_DEPENDENCIES_DIR}/common/libclang/${LIBCLANG_VERSION}")
+-if(NOT EXISTS "${LIBCLANG_DIR}")
+-  message(FATAL_ERROR "libclang ${LIBCLANG_VERSION} not found  (re-run

[gentoo-commits] repo/gentoo:master commit in: sci-mathematics/rstudio/, sci-mathematics/rstudio/files/

2016-02-20 Thread Mark Wright 
commit: 6fc8257f0c1be1c4ebd2f7db5486d43ab0749006
Author: Mark Wright  gentoo  org>
AuthorDate: Sat Feb 20 07:46:56 2016 +
Commit: Mark Wright  gentoo  org>
CommitDate: Sat Feb 20 07:47:53 2016 +
URL:https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6fc8257f

sci-mathematics/rstudio: Bump to 0.99.879

Package-Manager: portage-2.2.27

 sci-mathematics/rstudio/Manifest   |   1 +
 .../files/rstudio-0.99.879-clang-pandoc.patch  |  77 +++
 .../rstudio/files/rstudio-0.99.879-paths.patch | 130 +++
 .../rstudio/files/rstudio-0.99.879-prefs.patch |  45 
 sci-mathematics/rstudio/rstudio-0.99.879.ebuild| 250 +
 5 files changed, 503 insertions(+)

diff --git a/sci-mathematics/rstudio/Manifest b/sci-mathematics/rstudio/Manifest
index cc582ca..d84f721 100644
--- a/sci-mathematics/rstudio/Manifest
+++ b/sci-mathematics/rstudio/Manifest
@@ -23,6 +23,7 @@ DIST rstudio-0.99.483.tar.gz 16993049 SHA256 
85ce1a2f40690e4ed0338b153a1b3279ce9
 DIST rstudio-0.99.484.tar.gz 16993033 SHA256 
8ca4abccb9b554713077cf1057ac13abadfd7606f22ac3386b2a88a38ae8a427 SHA512 
407f50747bca749ef2c512e727cbe062abdd99c1eb76af09761e6bdfb4208f30117e1ee55b485447f64f6cf249bc939ef1fb4f8ce0199595e241a3cc617b4b8b
 WHIRLPOOL 
8cc16553ea2703f005908c69803b64da4172092cb0b3ff9015e7ec354340fcd1cfa82a218ac890adffafe3565ead94bee6f7bd239b1c56ee38cbeb5896f556b0
 DIST rstudio-0.99.486.tar.gz 16992775 SHA256 
4057195465e5032625bad0304bfbd9d123a78c3e4d6d5d41abcc6ef6ccd18a6f SHA512 
bb88d12f8ae2f79779532371d03a698a2c2897c212c42c8438d5223c14e1033098dbd7c278a929958fa4bbc764a3ceb101abe03634f0e33192de44cf97128a1f
 WHIRLPOOL 
13c35a69e525d90c6694d068526a2aede76a086427539294e46db67d0fc92759fb9cb0a1169cf88745ae1e121fdd7ba2e46bd2d2fb3fa17dc7fcc65848820941
 DIST rstudio-0.99.491.tar.gz 16992702 SHA256 
e8c21e2262b610a7ccf39283b97d114bee33c6840a060067b8019404ff44b03f SHA512 
2658694d6154f4b91b2dc07a7ec653edb7f593c4d9829a06a5e600e4db465ca6059418be6812d5ba2529fd6202dd136f0f58d74576f856fdcf6f81032d74f3c2
 WHIRLPOOL 
e71650a07cc010ab3c25955c7fa9e90eee68577c1ef78e02a5f81a0160c688908ec5ec4fd89c89e5a9bc49b926623cd5de976fb249aa2d472354d23f5fad76de
+DIST rstudio-0.99.879.tar.gz 17406999 SHA256 
73fa59be34eb63d9ed194642a93ad529d2c67cdcbcd2f291952fdef8e999a097 SHA512 
c2bbe598a4a9c2abc69e39807af70be5729a06bbcb73bac5249f74f3c3daddb2909bf4a46d988f0d4bfeabe308f0c31d2a75aa28a52f11c1343dfcead07e2c45
 WHIRLPOOL 
5c9c75a7891ac53eb80a36eff518d77a0c281b16bff383526ac1ede07ee57486d7b00be4e400a0cad48dfea92729becf25c67f18782af7930f9b4218592afe5c
 DIST selenium-java-2.37.0.zip 24625928 SHA256 
0eebba65d8edb01c1f46e462907c58f5d6e1cb0ddf63660a9985c8432bdffbb7 SHA512 
68624e82dbc751a25c50fad72702a98eb30d77fd4337d2a969f8e06bcc49e5f8c835cd27ec53772f3375014ddde1d5636936e966b75f3594a9f86aa18ba4e779
 WHIRLPOOL 
eb6659aae26f3c78b6f998546b23d0636c9d00ed8a7f985db1463ac4bd483ccb3e643d84e2ca0f59e0636a8de79eb552ff1d68eb6f9c06907029f7552d8f
 DIST selenium-server-standalone-2.37.0.jar 34730734 SHA256 
97bc8c699037fb6e99ba7af570fb60dbb1b7ce30cde2448287a44ef65b13023e SHA512 
b215446d42d2d1f69664349b6ae6dc53a532d3624c91254f0f4183d0ad764648792e5cc1126a55a1e60d9687d55200fed01d6d2f46cc3d853b1fa6ee38111018
 WHIRLPOOL 
20640591534f31f24825a9ed139589b182e8b60d86541bf0be104d3cc0280983f6566bd0459f2253ac3875b48a2798b205bac8f815a119fff6db625ce9bbc29e
 DIST shinyapps-0.98.1000.tar.gz 910095 SHA256 
b95c512ae0a0fb4335878d9cfcf9073e2cb3ccfed73543abe27ea8878ed36d57 SHA512 
3162317c4c20cfc1497e952a8235867084d629ae88407e6c465b3e208adb1dc97abfe6b9922e0374ddf4c8e38a76e112942bd312c54a66f74e6f2a3fe4c0a07c
 WHIRLPOOL 
ecc2bce78387cb42e9989163d8fca29220e66f085acde3323417058aebb624dafa8c0e1873c7d79e67324cbd5aad250ef9fcdbbc8f659d64482233b95d898a15

diff --git a/sci-mathematics/rstudio/files/rstudio-0.99.879-clang-pandoc.patch 
b/sci-mathematics/rstudio/files/rstudio-0.99.879-clang-pandoc.patch
new file mode 100644
index 000..c3af2b7
--- /dev/null
+++ b/sci-mathematics/rstudio/files/rstudio-0.99.879-clang-pandoc.patch
@@ -0,0 +1,77 @@
+--- rstudio-0.99.879-orig/src/cpp/session/CMakeLists.txt   2016-02-12 
09:24:39.0 +1100
 rstudio-0.99.879/src/cpp/session/CMakeLists.txt2016-02-19 
23:04:57.266186448 +1100
+@@ -25,30 +25,11 @@
+ if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/mathjax-23")
+   message(FATAL_ERROR "Mathjax 2.3 not found (re-run install-dependencies 
script to install)")
+ endif()
+-if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/pandoc")
+-  message(FATAL_ERROR "pandoc not found (re-run install-dependencies script 
to install)")
+-endif()
+ if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/rsconnect")
+   message(FATAL_ERROR "rsconnect package not found (re-run 
install-dependencies script to install)")
+ endif()
+ 
+ 
+-# verify libclang is installed
+-if(WIN32)
+-   set(LIBCLANG_VERSION "3.4")
+-else()
+-   set(LIBCLANG_VERSION "3.5")
+-endif()
+-set(LIBCLANG_DIR