[Getfem-commits] [getfem-commits] fix-skipped-update-pfp-in-interpolate-filter updated (72783ed -> 8a4a34b)

2019-02-02 Thread Konstantinos Poulios
logari81 pushed a change to branch fix-skipped-update-pfp-in-interpolate-filter. from 72783ed Fix skipped pfp update due to interpolate filter new 8a4a34b Minor coding style and whitespace changes Summary of changes: .../getfem_generic_assembly_compile_and_exec.h | 15

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2019-02-02 Thread Konstantinos Poulios
branch: fix-skipped-update-pfp-in-interpolate-filter commit 8a4a34b4084c1adff767ad2be2423140cd9547f0 Author: Konstantinos Poulios Date: Sun Feb 3 00:43:31 2019 +0100 Minor coding style and whitespace changes --- .../getfem_generic_assembly_compile_and_exec.h | 15 +++ src

Re: [Getfem-commits] please merge branch code_cleanup_to_pep8

2019-06-25 Thread Konstantinos Poulios
Hi, I am not sure about this. I like standardized strict code formatting but I personally feel insecure with automatic formating tools. BR Kostas On Fri, Jun 21, 2019 at 4:19 PM Tetsuo Koyama wrote: > Dear GetFEM++ project > > Hello. I formatted python script to pep8 by using >

[Getfem-commits] (no subject)

2019-05-19 Thread Konstantinos Poulios
branch: master commit a9977f425b66d68b20f4d7279d691bbdd0f227c4 Author: Konstantinos Poulios Date: Mon May 20 00:05:59 2019 +0200 Improvements and fixes for importing ANSYS meshes --- src/getfem_import.cc | 81 +--- 1 file changed, 64

[Getfem-commits] [getfem-commits] master updated (30db1aa -> a9977f4)

2019-05-19 Thread Konstantinos Poulios
logari81 pushed a change to branch master. from 30db1aa minor fixes new a9977f4 Improvements and fixes for importing ANSYS meshes Summary of changes: src/getfem_import.cc | 81 +--- 1 file changed, 64 insertions(+), 17

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2019-04-25 Thread Konstantinos Poulios
branch: master commit 27987b0664dd9b5624b37870deca1da829bd80e3 Author: Konstantinos Poulios Date: Thu Apr 25 23:24:54 2019 +0200 Fix regression (from 63775573b79f4c7d28b194cb63686c40409e41bb) --- src/getfem_generic_assembly_compile_and_exec.cc | 5 + 1 file changed, 5 insertions

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2019-04-25 Thread Konstantinos Poulios
branch: master commit 15ebc7b5cae236bf5bfc2c2a3b1721193ebe9cdd Author: Konstantinos Poulios Date: Fri Apr 26 00:00:23 2019 +0200 Revert constant class members in model::var_description --- src/getfem/getfem_models.h | 24 1 file changed, 12 insertions(+), 12

[Getfem-commits] [getfem-commits] master updated (27987b0 -> fffe851)

2019-04-25 Thread Konstantinos Poulios
logari81 pushed a change to branch master. from 27987b0 Fix regression (from 63775573b79f4c7d28b194cb63686c40409e41bb) new fffe851 Remove boost libraries leftovers Summary of changes: src/Makefile.am | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-)

[Getfem-commits] (no subject)

2019-04-25 Thread Konstantinos Poulios
branch: master commit fffe85183cc81e241bf091770482b9cc0954c73a Author: Konstantinos Poulios Date: Thu Apr 25 23:58:17 2019 +0200 Remove boost libraries leftovers --- src/Makefile.am | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/Makefile.am b/src/Makefile.am index

[Getfem-commits] [getfem-commits] master updated (fffe851 -> 15ebc7b)

2019-04-25 Thread Konstantinos Poulios
logari81 pushed a change to branch master. from fffe851 Remove boost libraries leftovers new 15ebc7b Revert constant class members in model::var_description Summary of changes: src/getfem/getfem_models.h | 24 1 file changed, 12 insertions(+), 12

[Getfem-commits] [getfem-commits] master updated (76d9cbf -> 9b03efd)

2019-10-16 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 76d9cbf Create .codecov.yml new 9b03efd Allow to detect lapack contained in the available BLAS library Summary of changes: configure.ac | 19 --- 1 file changed, 12 insertions(+), 7 deletions(-)

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2019-10-16 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 9b03efd9854e865e195005436a7fbacf0e925361 Author: Konstantinos Poulios Date: Wed Oct 16 17:43:04 2019 +0200 Allow to detect lapack contained in the available BLAS library --- configure.ac | 19 --- 1 file changed, 12 insertions(+), 7 deletions(-) diff

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2019-10-24 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 29539bc33c527893aaf820f582466d1819b62103 Author: Konstantinos Poulios Date: Thu Oct 24 14:31:49 2019 +0200 Deep copy of mesh regions when copying a mesh --- src/getfem_mesh.cc | 9 + 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/src

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2020-01-29 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit ff5eb9c9271cb82fd96b6044728bae6173203c81 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 08:57:05 2020 +0100 Fix wrong scaling of coupling matrix in internal variable condensation --- src/getfem_generic_assembly_compile_and_exec.cc | 29

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2020-01-29 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit 50ebaab6f372cc9435066732a13a9cb14498caa5 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 16:49:18 2020 +0100 Add support for internal variable condensation to the model object --- src/getfem/getfem_accumulated_distro.h | 6 +- src

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2020-01-29 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit 232385db09a7ff588cb8144fd1e8aa79ce6a32b6 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 09:47:03 2020 +0100 Fix size of internal variable condensation matrix - Including empty rows for keeping the implementation simpler

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2020-01-29 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit 78b191f942d27d95da95d6dec284c0f051531cb1 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 16:47:37 2020 +0100 Minor changes --- src/getfem/getfem_models.h | 16 +--- src

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables updated: Fix in proccessing of multiple coupled internal variables

2020-01-29 Thread Konstantinos Poulios via Getfem-commits
of multiple coupled internal variables 19ccc74 is described below commit 19ccc748b9dd0dbc50391074d1e3eeceb8f93d53 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 22:08:50 2020 +0100 Fix in proccessing of multiple coupled internal variables --- src/getfem_generic_assembly_compile_and_exec.cc

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables updated: Refactoring of model solvers

2020-01-28 Thread Konstantinos Poulios via Getfem-commits
solvers f85112c is described below commit f85112cc3c7947eab82ed34cac44b751474852ed Author: Konstantinos Poulios AuthorDate: Wed Jan 29 06:41:07 2020 +0100 Refactoring of model solvers - make the model_pb object responsible for the solution of the linearized system --- src/getfem

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables updated: Fix model class for internal variable condensation

2020-02-01 Thread Konstantinos Poulios via Getfem-commits
for internal variable condensation d7d1e07 is described below commit d7d1e07384e555389d3c1e7cdf46bc970cf5a4de Author: Konstantinos Poulios AuthorDate: Sat Feb 1 11:23:55 2020 +0100 Fix model class for internal variable condensation --- src/getfem_models.cc | 13 ++--- 1 file changed, 6

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables updated: Add unit test for internal variable condensation

2020-02-01 Thread Konstantinos Poulios via Getfem-commits
for internal variable condensation 9d1c444 is described below commit 9d1c4449796fe7b3c3adabeed57977c5d6ac7507 Author: Konstantinos Poulios AuthorDate: Sat Feb 1 11:28:19 2020 +0100 Add unit test for internal variable condensation --- tests/Makefile.am | 4 + tests/test_condensation.cc

Re: [Getfem-commits] Please merge devel-tetsuo-fix-type

2020-01-17 Thread Konstantinos Poulios via Getfem-commits
I would maybe leave this for after merging my internal-variables branch On Fri, Jan 17, 2020 at 8:36 AM Tetsuo Koyama wrote: > Hi getfem project. > > I fixed one line of Newmark_beta_method object code. > It is a explicit define of scalar_type. > Could you merge devel-tetsuo-fix-type? > > Thank

[Getfem-commits] (no subject)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit 79df5e1c2c7b53417298e9d2041d6d414cc049d5 Author: Konstantinos Poulios Date: Thu Jan 2 18:43:14 2020 +0100 Clean variable inheritance model for ga_workspace - Now it is possible to create a ga_workspace linked to a model

[Getfem-commits] [getfem-commits] devel-logari81-internal-variables updated (fb27f37 -> 79df5e1)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-internal-variables. from fb27f37 Refactor inheritance of model disabled variables by ga_workspace new 79df5e1 Clean variable inheritance model for ga_workspace Summary of changes: src/getfem/getfem_generic_assembly.h

[Getfem-commits] (no subject)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit e903249a77c10f310e61421aa6e237bd2bb86c08 Author: Konstantinos Poulios Date: Fri Jan 3 02:26:06 2020 +0100 Refactor compilation and execution of global vector and matrix assembly - more specialized matrix assembly instruction

[Getfem-commits] [getfem-commits] devel-logari81-internal-variables updated (79df5e1 -> e903249)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-internal-variables. from 79df5e1 Clean variable inheritance model for ga_workspace new e903249 Refactor compilation and execution of global vector and matrix assembly Summary of changes:

Re: [Getfem-commits] Happy New Year 2020

2020-01-03 Thread Konstantinos Poulios via Getfem-commits
ch I know updates the copyright of all the sources > > in the project. So I followed that way. But your way may be more > > appropriate to maintain the source code. Either way, I will follow the > > project policy and will recheck the changes. (Sorry I think I should > >

[Getfem-commits] (no subject)

2020-01-01 Thread Konstantinos Poulios via Getfem-commits
branch: master commit cac4df66312b3b6155eab78c794b820a5e25ff57 Author: Konstantinos Poulios Date: Wed Jan 1 11:45:37 2020 +0100 Code readability and typo fixes --- src/getfem/getfem_generic_assembly.h| 14 +- src/getfem/getfem_models.h | 4 +- src

[Getfem-commits] [getfem-commits] master updated (46ae0a7 -> cac4df6)

2020-01-01 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 46ae0a7 :arrow_up: isort import for PEP8 new cac4df6 Code readability and typo fixes Summary of changes: src/getfem/getfem_generic_assembly.h| 14 +- src/getfem/getfem_models.h | 4 +-

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2020-01-02 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit fb27f37675ffd7d6c8a0a12bd1c6cbaa255dacdd Author: Konstantinos Poulios Date: Thu Jan 2 11:05:11 2020 +0100 Refactor inheritance of model disabled variables by ga_workspace --- src/getfem/getfem_generic_assembly.h | 10 ++-- src

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables created (now fb27f37)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-internal-variables. at fb27f37 Refactor inheritance of model disabled variables by ga_workspace This branch includes the following new commits: new fb27f37 Refactor inheritance of model disabled variables by ga_workspace

[Getfem-commits] (no subject)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
branch: master commit ab907910d9bafc8de6fc914a8d7d66e2bca1f152 Author: Konstantinos Poulios Date: Thu Jan 2 11:03:03 2020 +0100 File header fixes --- src/getfem/getfem_fem_global_function.h | 2 +- src/getfem/getfem_global_function.h | 2 +- src/getfem

[Getfem-commits] [getfem-commits] master updated (f360290 -> ab90791)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from f360290 Merge remote-tracking branch 'origin/devel-tetsuo-happy-new-year-2020' new ab90791 File header fixes Summary of changes: src/getfem/getfem_fem_global_function.h | 2 +- src/getfem/getfem_global_function.h

[Getfem-commits] (no subject)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
branch: master commit cde202b2cfc85d2288ed1a2c7aa4452e7ec07a46 Author: Konstantinos Poulios Date: Thu Jan 2 11:52:06 2020 +0100 File header fixes --- GNU_GPL_V3 | 2 +- INSTALL| 2 +- superlu/colamd.c | 2 +- superlu/colamd.h | 2 +- superlu/dlamch.c | 6

[Getfem-commits] [getfem-commits] master updated (ab90791 -> cde202b)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from ab90791 File header fixes new cde202b File header fixes Summary of changes: GNU_GPL_V3 | 2 +- INSTALL| 2 +- superlu/colamd.c | 2 +- superlu/colamd.h | 2 +- superlu/dlamch.c | 6 +++---

[Getfem-commits] [getfem-commits] master updated (cde202b -> 45d95da)

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from cde202b File header fixes new 45d95da File header fixes Summary of changes: m4/ax_prog_cc_mpi.m4 | 2 +- m4/ax_prog_cxx_mpi.m4 | 2 +- m4/ax_prog_fc_mpi.m4 | 2 +- m4/matlab.m4 | 2 +- m4/matlabver.m4 | 2 +- 5

Re: [Getfem-commits] Happy New Year 2020

2020-01-02 Thread Konstantinos Poulios via Getfem-commits
Hi Tetsuo and happy 2020, I have found and fixed quite a few mistakes in this commit. But I would like to ask you if you have time to recheck your changes in this commit manually to make sure that we haven't broken any more headers. In general we shouldn't alter third-party license headers. Then

[Getfem-commits] (no subject)

2020-01-06 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit d788e47a4897aee425275c7dbc1a16e9a4609a87 Author: Konstantinos Poulios AuthorDate: Mon Jan 6 12:40:35 2020 +0100 Remove replaced assembly instruction class --- src/getfem_generic_assembly_compile_and_exec.cc | 84 - 1

[Getfem-commits] [getfem-commits] devel-logari81-internal-variables updated (afe03f8 -> d788e47)

2020-01-06 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-internal-variables. from afe03f8 adding a test new d56812c Basic infrastructure for defining internal variables new d788e47 Remove replaced assembly instruction class Summary of changes: src/getfem/getfem_generic_assembly.h

[Getfem-commits] (no subject)

2020-01-06 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-internal-variables commit d56812c6dc2926e0978df1e15786ed07a687ecb7 Author: Konstantinos Poulios AuthorDate: Fri Jan 3 23:45:46 2020 +0100 Basic infrastructure for defining internal variables - no condensation functionality yet --- src/getfem

[Getfem-commits] [getfem-commits] branch devel-logari81-internal-variables updated: Implementation of internal variable condensation in ga_workspace

2020-01-08 Thread Konstantinos Poulios via Getfem-commits
of internal variable condensation in ga_workspace ee1b344 is described below commit ee1b344c1a0c0545d0255a217dbf3c849cae39e1 Author: Konstantinos Poulios AuthorDate: Wed Jan 8 11:53:37 2020 +0100 Implementation of internal variable condensation in ga_workspace --- src/getfem

[Getfem-commits] [getfem-commits] branch master updated: Fix and simplify ga_local_projection for models with internal variables

2020-04-18 Thread Konstantinos Poulios via Getfem-commits
6ff98d3 is described below commit 6ff98d372828f5d48558f6610095e4d122edfa0f Author: Konstantinos Poulios AuthorDate: Sat Apr 18 15:58:40 2020 +0200 Fix and simplify ga_local_projection for models with internal variables --- src/getfem_generic_assembly_interpolation.cc | 17 - 1

[Getfem-commits] [getfem-commits] branch master updated: Interface functions for the addition of internal variables to a model

2020-04-18 Thread Konstantinos Poulios via Getfem-commits
9de33b4 is described below commit 9de33b40fb67be58b755716bf0b06f8cd5b32cd9 Author: Konstantinos Poulios AuthorDate: Sat Apr 18 15:56:38 2020 +0200 Interface functions for the addition of internal variables to a model --- interface/src/gf_model_set.cc | 23 +++ 1 file changed

[Getfem-commits] [getfem-commits] branch master updated: Fix too strict assertion

2020-04-19 Thread Konstantinos Poulios via Getfem-commits
85d5e07c867446a77bc8b15c9a107ef368f296f2 Author: Konstantinos Poulios AuthorDate: Sun Apr 19 20:54:36 2020 +0200 Fix too strict assertion --- src/getfem_generic_assembly_compile_and_exec.cc | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/getfem_generic_assembly_compile_and_exec.cc

Re: [Getfem-commits] Please merge devel-tetsuo-fix-type

2020-04-17 Thread Konstantinos Poulios via Getfem-commits
Has this been merged in the meanwhile? On Fri, Jan 17, 2020 at 12:40 PM Tetsuo Koyama wrote: > OK. thanks. > > 2020年1月17日(金) 20:17 Konstantinos Poulios : > >> I would maybe leave this for after merging my internal-variables branch >> >> On Fri, Jan 17, 2020 at 8

[Getfem-commits] [getfem-commits] branch master updated: Fix deprecation warnings

2020-04-04 Thread Konstantinos Poulios via Getfem-commits
03b82ccab94cbfdf262f000cfc31660d8b6955fd Author: Konstantinos Poulios AuthorDate: Sat Apr 4 14:40:50 2020 +0200 Fix deprecation warnings --- contrib/aposteriori/aposteriori_laplacian.cc | 4 ++-- contrib/xfem_contact/xfem_stokes.cc | 2 +- src/getfem/bgeot_mesh_structure.h| 4 ++-- 3

[Getfem-commits] [getfem-commits] branch master updated: Support both installed and non-installed python3 module imports

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
is described below commit fef17a660a013637f777ab5846386084df65ac09 Author: Konstantinos Poulios AuthorDate: Fri Apr 3 16:59:20 2020 +0200 Support both installed and non-installed python3 module imports --- bin/extract_doc | 6 +- interface/src/python/__init__.py | 2 +- 2

[Getfem-commits] [getfem-commits] branch master updated: Refactor inheritance of model disabled variables by ga_workspace

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
is described below commit df4d3c40d6fe7f5573ff79ee17b87f013e4ce1c1 Author: Konstantinos Poulios AuthorDate: Thu Jan 2 11:05:11 2020 +0100 Refactor inheritance of model disabled variables by ga_workspace --- src/getfem/getfem_generic_assembly.h | 10 ++-- src

[Getfem-commits] [getfem-commits] branch master updated: Clean variable inheritance model for ga_workspace

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
commit 7afd1f596b1e290d98c8f3de498c13835faece24 Author: Konstantinos Poulios AuthorDate: Thu Jan 2 18:43:14 2020 +0100 Clean variable inheritance model for ga_workspace - Now it is possible to create a ga_workspace linked to a model or another workspace without inheriting

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit a8a51a7f4ba8e30e1b9fee73288705a7d7a55d9b Author: Yves Renard AuthorDate: Sun Jan 5 16:11:55 2020 +0100 adding a test --- interface/tests/python/Makefile.am | 1 + .../demo_thermo_elasticity_electrical_coupling.py | 26 +- 2 files

[Getfem-commits] [getfem-commits] master updated (7afd1f5 -> a8a51a7)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 7afd1f5 Clean variable inheritance model for ga_workspace new 2942d41 Refactor compilation and execution of global vector and matrix assembly new a8a51a7 adding a test Summary of changes: interface/tests/python/Makefile.am

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 2942d419172f23fa7249db87a46136b0533c0992 Author: Konstantinos Poulios AuthorDate: Fri Jan 3 02:26:06 2020 +0100 Refactor compilation and execution of global vector and matrix assembly - more specialized matrix assembly instruction classes for different

[Getfem-commits] [getfem-commits] branch master updated: Implementation of internal variable condensation in ga_workspace

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
is described below commit f74739ad3b6576fd78f3babfbb818d9f00f8a44b Author: Konstantinos Poulios AuthorDate: Wed Jan 8 11:53:37 2020 +0100 Implementation of internal variable condensation in ga_workspace --- src/getfem/getfem_generic_assembly.h | 18

[Getfem-commits] [getfem-commits] branch master updated: Refactoring of model solvers

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
86ae3b6bbc4b43dea16e6bd69a486a668d8653d7 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 06:41:07 2020 +0100 Refactoring of model solvers - make the model_pb object responsible for the solution of the linearized system --- src/getfem/getfem_model_solvers.h | 181

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 75ef42f0da2be172db2f884b0afa9301ba6a43e9 Author: Konstantinos Poulios AuthorDate: Fri Jan 3 23:45:46 2020 +0100 Basic infrastructure for defining internal variables - no condensation functionality yet --- src/getfem/getfem_generic_assembly.h| 14

[Getfem-commits] [getfem-commits] master updated (a8a51a7 -> f7d20be)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from a8a51a7 adding a test new 75ef42f Basic infrastructure for defining internal variables new f7d20be Remove replaced assembly instruction class Summary of changes: src/getfem/getfem_generic_assembly.h| 14 +++-

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit f7d20be3b26b80094c08d54007703e6006c75ee2 Author: Konstantinos Poulios AuthorDate: Mon Jan 6 12:40:35 2020 +0100 Remove replaced assembly instruction class --- src/getfem_generic_assembly_compile_and_exec.cc | 90 + 1 file changed, 3 insertions

[Getfem-commits] [getfem-commits] master updated (86ae3b6 -> afffc20)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 86ae3b6 Refactoring of model solvers new 1765106 Fix wrong scaling of coupling matrix in internal variable condensation new 46ce1c6 Fix size of internal variable condensation matrix new afffc20 Minor changes Summary of

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 46ce1c676124687e70d95299c9cf28cd10c4b76b Author: Konstantinos Poulios AuthorDate: Wed Jan 29 09:47:03 2020 +0100 Fix size of internal variable condensation matrix - Including empty rows for keeping the implementation simpler --- src/getfem

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 1765106029a5aa40aa84435ebd151d460d294a6a Author: Konstantinos Poulios AuthorDate: Wed Jan 29 08:57:05 2020 +0100 Fix wrong scaling of coupling matrix in internal variable condensation --- src/getfem_generic_assembly_compile_and_exec.cc | 29 +++-- 1

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit afffc209a896ea5d7606aa86b227b7700c546631 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 16:47:37 2020 +0100 Minor changes --- src/getfem/getfem_models.h | 16 +--- src/getfem_generic_assembly_compile_and_exec.cc | 12

[Getfem-commits] [getfem-commits] master updated (afffc20 -> 7262aa3)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from afffc20 Minor changes new 6ddb898 Add support for internal variable condensation to the model object new e32714c Fix in proccessing of multiple coupled internal variables new 7262aa3 Fix bug in rhs computation of models with

[Getfem-commits] (no subject)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit e32714c433e96158d24b7f71915178d671b85c15 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 22:08:50 2020 +0100 Fix in proccessing of multiple coupled internal variables --- src/getfem_generic_assembly_compile_and_exec.cc | 134 +--- 1 file changed

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 6ddb89892316a0c6a0cb7eda9a6ab0db07c48ab4 Author: Konstantinos Poulios AuthorDate: Wed Jan 29 16:49:18 2020 +0100 Add support for internal variable condensation to the model object --- src/getfem/getfem_accumulated_distro.h | 6 +- src/getfem/getfem_models.h

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 4c176ff6596a7966bd55af715834ffec5d71190a Author: Konstantinos Poulios AuthorDate: Sat Feb 1 10:07:06 2020 +0100 Simplification --- .../getfem_generic_assembly_compile_and_exec.h | 2 ++ src/getfem_generic_assembly_compile_and_exec.cc| 28

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit f32d6888dd04b004f3a2f50109946fa519e9bf13 Author: Konstantinos Poulios AuthorDate: Sat Apr 4 02:18:29 2020 +0200 Explicit recording of terms that require post-assembly reduction # Conflicts: # src/getfem/getfem_generic_assembly_compile_and_exec.h

[Getfem-commits] [getfem-commits] master updated (7262aa3 -> 4c176ff)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 7262aa3 Fix bug in rhs computation of models with internal variables new f32d688 Explicit recording of terms that require post-assembly reduction new 4c176ff Simplification Summary of changes:

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 988ba0f123146b5e2a5d881746969958659d4ac4 Author: Konstantinos Poulios AuthorDate: Sat Feb 1 11:51:40 2020 +0100 Mention internal variables in the model object documentation --- doc/sphinx/source/userdoc/model_object.rst | 23 +++ src/getfem

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit cc6b8bcca2812961959672c2b6249d9cbeeac733 Author: Konstantinos Poulios AuthorDate: Sat Feb 1 10:55:10 2020 +0100 Fixes and simplifications in internal variable condensation - First working version --- src/getfem/getfem_generic_assembly.h| 3

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 2722c83bff4df1f817e450cbc0085059369e948e Author: Konstantinos Poulios AuthorDate: Sat Feb 1 11:28:19 2020 +0100 Add unit test for internal variable condensation --- tests/Makefile.am | 4 + tests/test_condensation.cc | 184

[Getfem-commits] [getfem-commits] master updated (4c176ff -> 988ba0f)

2020-04-03 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch master. from 4c176ff Simplification new cc6b8bc Fixes and simplifications in internal variable condensation new 47ea7f9 Fix model class for internal variable condensation new 2722c83 Add unit test for internal variable condensation

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2020-04-03 Thread Konstantinos Poulios via Getfem-commits
branch: master commit 47ea7f9dd6904fe317a3955ae2c8712cf5a025f7 Author: Konstantinos Poulios AuthorDate: Sat Feb 1 11:23:55 2020 +0100 Fix model class for internal variable condensation --- src/getfem_models.cc | 13 ++--- 1 file changed, 6 insertions(+), 7 deletions(-) diff --git

[Getfem-commits] [getfem-commits] branch master updated: Support EXT_SUFFIX of distutils in Python 3

2020-03-25 Thread Konstantinos Poulios via Getfem-commits
commit 4bcad6f9da1fdfffe86269c1dc5c8a9171bda978 Author: Konstantinos Poulios AuthorDate: Wed Mar 25 14:49:49 2020 +0100 Support EXT_SUFFIX of distutils in Python 3 --- configure.ac | 2 ++ interface/src/python/Makefile.am | 10 +- 2 files changed, 7 insertions(+), 5

[Getfem-commits] [getfem-commits] branch master updated: Allow to override the dimension of the detected faces by Mesh.outer_faces()

2020-03-25 Thread Konstantinos Poulios via Getfem-commits
() 58b2f3b is described below commit 58b2f3bb60f3ccf513e29788f9ed6f88bc445a2f Author: Konstantinos Poulios AuthorDate: Wed Mar 25 15:01:15 2020 +0100 Allow to override the dimension of the detected faces by Mesh.outer_faces() For example outer_faces(2) will detect edges of a surface

[Getfem-commits] [getfem-commits] branch master updated: Fix python 3 module import

2020-04-01 Thread Konstantinos Poulios via Getfem-commits
e3fa52a6ac917295537aefe78ac01b3f8d0a69b8 Author: Konstantinos Poulios AuthorDate: Wed Apr 1 18:21:10 2020 +0200 Fix python 3 module import --- bin/extract_doc | 2 +- interface/src/python/__init__.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/bin/extract_doc b

Re: [Getfem-commits] split mumps script in python test

2020-04-26 Thread Konstantinos Poulios via Getfem-commits
Hi Tetsuo, Thanks for running the tests on different systems. I don't think that this is a good option. We should not remove the tests that fail. We should instead fix the issue. That's what the tests are for. Best regards Kostas On Fri, Apr 24, 2020 at 6:44 PM Tetsuo Koyama wrote: > Dear

[Getfem-commits] [getfem-commits] branch master updated: Small adaptation of the release notes

2020-04-21 Thread Konstantinos Poulios via Getfem-commits
3c282a22785b0baef1e1075fcfebd3b80e8ed421 Author: Konstantinos Poulios AuthorDate: Tue Apr 21 22:23:53 2020 +0200 Small adaptation of the release notes --- doc/sphinx/source/whatsnew/5.4.rst | 20 1 file changed, 12 insertions(+), 8 deletions(-) diff --git a/doc/sphinx/source

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-07 Thread Konstantinos Poulios via Getfem-commits
Dear Tetsuo I think it is an important contribution to add vtu support, especially if it is binary/compressed, just ascii is not very useful. However we might need to discuss a bit on how to do it. As far as I can see you have used boost for xml writing. I think we had dropped our dependency on

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-07 Thread Konstantinos Poulios via Getfem-commits
just to add that for compressed vtu files I use the attached conversion script based on binary vtk files exported from getfem. On Thu, May 7, 2020 at 11:59 AM Konstantinos Poulios < logar...@googlemail.com> wrote: > Dear Tetsuo > > I think it is an important contribution to

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-10 Thread Konstantinos Poulios via Getfem-commits
Kostas On Sun, May 10, 2020 at 10:23 PM Konstantinos Poulios < logar...@googlemail.com> wrote: > by the way, the "remove_dof_unused" function you should make it work > in-place on the passed by reference V vector, as was the code that you > replaced with this funct

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-10 Thread Konstantinos Poulios via Getfem-commits
please don't use markup in your git commit description? It might look > nice in your git client but it looks ugly and difficult to read on other's > systems. > > Thank you for pointing it out. I used emoji prefix which is popular in > > my local. It is not good to use it in a globa

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-10 Thread Konstantinos Poulios via Getfem-commits
for merging we can move the final result to a new clean branch to merge to master. Best regards Kostas On Sun, May 10, 2020 at 10:34 PM Konstantinos Poulios < logar...@googlemail.com> wrote: > the other thing is the big overlapping between the vtk_export class and > the new vtu_export class.

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-10 Thread Konstantinos Poulios via Getfem-commits
d just add redundant copy operations. Best regards Kostas On Sun, May 10, 2020 at 10:16 PM Konstantinos Poulios < logar...@googlemail.com> wrote: > Dear Tetsuo, > > Thanks for your answer. Your code looks quite nice actually. I have one > question about the lines > st

[Getfem-commits] [getfem-commits] branch devel-logari81-gcc9-openmp updated: Prioritize generic blas detection

2020-05-23 Thread Konstantinos Poulios via Getfem-commits
77d6f76 is described below commit 77d6f761bf8c9c681960c28c0d42b79856b65bd6 Author: Konstantinos Poulios AuthorDate: Sat May 23 10:12:24 2020 +0200 Prioritize generic blas detection --- configure.ac | 11 ++- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/configure.ac b

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2020-05-22 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-gcc9-openmp commit efe0d4541f6b972d1c48ad685131f42d68ff56b8 Author: Konstantinos Poulios AuthorDate: Fri May 22 12:01:45 2020 +0200 Fix compilation and test errors with --enable-openmp --- src/getfem/getfem_omp.h| 5 - tests/test_kdtree.cc | 2 ++ tests

[Getfem-commits] [getfem-commits] branch devel-logari81-gcc9-openmp created (now efe0d45)

2020-05-22 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-gcc9-openmp. at efe0d45 Fix compilation and test errors with --enable-openmp This branch includes the following new commits: new efe0d45 Fix compilation and test errors with --enable-openmp

[Getfem-commits] [getfem-commits] branch devel-logari81-xml created (now db725b2)

2020-05-23 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-xml. at db725b2 Move enumeration from header file This branch includes the following new commits: new db725b2 Move enumeration from header file

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2020-05-23 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-xml commit db725b2e96688a40a9d5ed83d0876f941134fdb1 Author: Konstantinos Poulios AuthorDate: Sat May 23 20:37:25 2020 +0200 Move enumeration from header file --- src/getfem/getfem_export.h | 20 --- src/getfem_export.cc | 63

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2020-05-23 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-xml commit dbeb54b5b4d48d384c11eb293064841985f6d6a4 Author: Konstantinos Poulios AuthorDate: Sat May 23 20:48:23 2020 +0200 Minor changes --- src/getfem/getfem_export.h | 2 +- src/getfem_export.cc | 62 +++--- 2 files

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2020-05-23 Thread Konstantinos Poulios via Getfem-commits
branch: devel-logari81-xml commit 9f956bb759bda182a25ae071f8e691c4a345bf12 Author: Konstantinos Poulios AuthorDate: Sat May 23 21:06:56 2020 +0200 Export to VTU file format (only ascii), based on the original implementation by Tetsuo Koyama --- doc/sphinx/source/replaces.txt | 5

[Getfem-commits] [getfem-commits] devel-logari81-xml updated (db725b2 -> 9f956bb)

2020-05-23 Thread Konstantinos Poulios via Getfem-commits
logari81 pushed a change to branch devel-logari81-xml. from db725b2 Move enumeration from header file new dbeb54b Minor changes new 9f956bb Export to VTU file format (only ascii), based on the original implementation by Tetsuo Koyama Summary of changes:

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-23 Thread Konstantinos Poulios via Getfem-commits
lpful to me. I made new branch > devel-tetsuo-xml02. It is a squash of commit of devel-tetsuo-xml. > > Thank you for reading. > > Best regards Tetsuo > > > > > 2020年5月11日(月) 5:16 Konstantinos Poulios : > > > > > > Dear Tetsuo, > > &

[Getfem-commits] [getfem-commits] branch master updated: Fix bug in second derivative of inverse operator

2020-10-03 Thread Konstantinos Poulios via Getfem-commits
commit 3507069aa22f5d232bd3cf5b3e3d45c500e5c5ba Author: Konstantinos Poulios AuthorDate: Sun Oct 4 01:00:02 2020 +0200 Fix bug in second derivative of inverse operator --- src/getfem_generic_assembly_functions_and_operators.cc | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff

Re: [Getfem-commits] please merge branch devel-tetsuo-xml

2020-05-25 Thread Konstantinos Poulios via Getfem-commits
ect to merge. > > Thanks for your advice. > > > > Best regards Tetsuo > > > > 2020年5月24日(日) 4:13 Konstantinos Poulios : > > > > > > Dear Tetsuo, > > > > > > I have revised your code and refactored it in my logari81-devel-

[Getfem-commits] [getfem-commits] branch devel-logari81-gcc9-openmp updated: Fix compilation warnings and reduce code duplication

2020-05-22 Thread Konstantinos Poulios via Getfem-commits
code duplication b63998e is described below commit b63998e72d5d508542797b769a160f13402e4467 Author: Konstantinos Poulios AuthorDate: Fri May 22 22:16:16 2020 +0200 Fix compilation warnings and reduce code duplication --- src/getfem/bgeot_small_vector.h | 253

[Getfem-commits] [getfem-commits] branch master updated: Add finite strain plasticity examples with linear isotropic hardening

2020-12-25 Thread Konstantinos Poulios via Getfem-commits
4ff15ca is described below commit 4ff15ca9bd431068e9318a645a320edf383a4e13 Author: Konstantinos Poulios AuthorDate: Sat Dec 26 01:03:59 2020 +0100 Add finite strain plasticity examples with linear isotropic hardening - 3D - plane strain (2D) - axisymmetric (2D) --- configure.ac

[Getfem-commits] [getfem-commits] branch master updated: Fix redundant integration points in projected_fem

2021-01-06 Thread Konstantinos Poulios via Getfem-commits
commit f60023bf46fafbf1a283674307d9ce022b282945 Author: Konstantinos Poulios AuthorDate: Wed Jan 6 09:10:27 2021 +0100 Fix redundant integration points in projected_fem --- src/getfem_projected_fem.cc | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/src

[Getfem-commits] [getfem-commits] branch master updated: Remove invalid assertion

2020-12-18 Thread Konstantinos Poulios via Getfem-commits
8324be3a1a98e71566b397a4b51a076458aa70b0 Author: Konstantinos Poulios AuthorDate: Fri Dec 18 17:58:24 2020 +0100 Remove invalid assertion --- src/getfem_models.cc | 3 --- 1 file changed, 3 deletions(-) diff --git a/src/getfem_models.cc b/src/getfem_models.cc index a33ae53..94cf1b3 100644 --- a/src

[Getfem-commits] [getfem-commits] branch master updated: Fix GWFL inconsistency in slicing of tensors with single element leading dimensions

2020-12-21 Thread Konstantinos Poulios via Getfem-commits
dimensions 91fb8d3 is described below commit 91fb8d39aac4fbe4ecaed49f57b2bdac9643057e Author: Konstantinos Poulios AuthorDate: Mon Dec 21 10:48:02 2020 +0100 Fix GWFL inconsistency in slicing of tensors with single element leading dimensions --- src/getfem_generic_assembly_compile_and_exec.cc

[Getfem-commits] [getfem-commits] branch master updated: Fix issue with internal variables and reduced fem

2020-12-22 Thread Konstantinos Poulios via Getfem-commits
commit fb97892482904578ebcc3043d73fdb92f91e4677 Author: Konstantinos Poulios AuthorDate: Tue Dec 22 13:57:37 2020 +0100 Fix issue with internal variables and reduced fem --- interface/src/gf_model_get.cc| 17 + src/getfem_generic_assembly_workspace.cc | 20

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