Re: [gmx-users] GMX manually generate topology for residues

2013-11-01 Thread Mark Abraham
They're http://en.wikipedia.org/wiki/C_preprocessor symbols that are #defined elsewhere in the directory that contains that .rtp file. The names/symbols probably map to the original force field literature. grep is your friend. Mark On Fri, Nov 1, 2013 at 6:45 AM, charles

[gmx-users] GMX manually generate topology for residues

2013-10-31 Thread charles
i am a newbie to gromacs, trying to generate a new rtp entry for my residue. Bonds, dihedrals of .rtp file has gb_XX what is gb_XX numbers? how can get informations about that? How to define those velues for my residues? -- gmx-users mailing listgmx-users@gromacs.org