Dear Mark,
Hi ! Currently I tried to install xmgrace but the toolbar menue is not shown on
window screen so I am using gnuplot for analysis as I have little know how
about unix/linux.Please set to me the following.
[EMAIL PROTECTED]:~ cd project
[EMAIL PROTECTED]:~/project ls
#bfac.pdb.1#
Hi,
On Tuesday, 6. May 2008 15:07, s lal badshah wrote:
Dear Mark,
Hi ! Currently I tried to install xmgrace but the toolbar menue is not
shown on window screen so I am using gnuplot for analysis as I have little
know how about unix/linux.Please set to me the following. [EMAIL
PROTECTED]:~
Hello!
Please note that xmgrace and gunplot are two different programs and as
such work in different ways, for example in terms of what types of
input and output they expect. The xvg-files that Gromacs produces are
indended for xmgrace, and will not work out-of-the-box with gnuplot.
Florian Haberl wrote:
take a look on your data file
less rmsf.xvg
first 12 lines or so are without data. It is the header for xmgrace, so you
have to ignore them your delete out of the file.
You can also analyse the data with the flag -noxvgr, than it will be written
without xmgrace
Hi,
Actually gnuplot can plot the xvg files without any modification. It skips all
the lines in the file which is not compatible with the command: u 1:2
The problem is the missing word about how to draw the data. Maybe you have also
recognized it meanwhile. In the correct form:
plot rmsf.xvg u
Zoltan Varga wrote:
Hi,
Actually gnuplot can plot the xvg files without any modification. It
skips all the lines in the file which is not compatible with the
command: u 1:2
Interesting, that's true. I'll update the wiki. If one is happy using
the using approach then that works, but for
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