[gmx-users] Measure angle with g_sgangle

Hey. I'm using Gromacs to simulate a transmembrane-peptide and would like to measure the angle between three residues of the protein. The protein gets during the simulation a kink of about 87°. I would like to measure the real angle of the kink with g_sgangle. So I made an index file and

Re: [gmx-users] Measure angle with g_sgangle

On 5/15/12 2:47 PM, Mast, Thilo wrote: Hey. I'm using Gromacs to simulate a transmembrane-peptide and would like to measure the angle between three residues of the protein. The protein gets during the simulation a kink of about 87°. I would like to measure the real angle of the kink with