Re: [gmx-users] Recommended protocol for cooling down temperature in 50 K steps

2012-03-08 Thread Justin A. Lemkul
Andrew DeYoung wrote: Hi, I have a system that I would like to equilibrate in the NPT ensemble at high temperature, and then, in subsequent equilibration steps, cool down in steps of 50 K. Thus, in the first step, I will use gen_vel = yes, while in all subsequent steps, I will use gen_vel =

Re: [gmx-users] Recommended protocol for cooling down temperature in 50 K steps

2012-03-08 Thread Mark Abraham
On 9/03/2012 1:08 PM, Justin A. Lemkul wrote: Andrew DeYoung wrote: Hi, I have a system that I would like to equilibrate in the NPT ensemble at high temperature, and then, in subsequent equilibration steps, cool down in steps of 50 K. Thus, in the first step, I will use gen_vel = yes,