Re: [gmx-users] Simulation at unrealistic temperatures

2009-11-26 Thread Jochen Hub
Possibly your water is boiling? YOu could try with NVT. Neha Bharat Gajaria wrote: Dear List, I m trying to run an NPT simulation at 600K which looks unrealistic. I m running minimization followed by anealing and then NPT simulation (mdp files are attached). The job keeps running but after

Re: [gmx-users] Simulation at unrealistic temperatures

2009-11-26 Thread Omer Markovitch
Maybe the system is exploding? Have you looked at the movie? And I agree with you that it might be unrealistic to do simulation at 600K using a force-field which was parametrized at 300K. Omer. On Thu, Nov 26, 2009 at 05:56, Neha Bharat Gajaria wrote: > > Dear List, > > I m trying to run an NPT s

[gmx-users] Simulation at unrealistic temperatures

2009-11-25 Thread Neha Bharat Gajaria
Dear List, I m trying to run an NPT simulation at 600K which looks unrealistic. I m running minimization followed by anealing and then NPT simulation (mdp files are attached). The job keeps running but after 162 ps, the CPU usage gradually decreases to 26% without any further output. Your help is