[gmx-users] Using .pdb only

Hi There, I am usinng gromacs for running MDS of one protein, Can I use the pdb file only without generating the .gro file i.e. without using pdb2gmx ? If no, then how can I avoid addition of hydrogen during pdb2gmx ? With Thanks, Vivek ___ gmx-users

Re: [gmx-users] Using .pdb only

vivek sharma wrote: Hi There, I am usinng gromacs for running MDS of one protein, Can I use the pdb file only without generating the .gro file i.e. without using pdb2gmx ? Theoretically, yes. Gromacs can read a number of file formats at any stage (.pdb, .gro, etc). If no, then how can