[gmx-users] dendrimer simulation

I have to simulate a G0 PAMAM dendrimer, functionalized on the 4 hands with peptide oligomers. I have succesfully generated the .itp file needed, and have run some simulation. The same applies to the peptide. However i run into problems combining them. It appears the specbond.dat file is only

Re: [gmx-users] dendrimer simulation

On 7/24/12 10:14 AM, neme...@pharm.u-szeged.hu wrote: I have to simulate a G0 PAMAM dendrimer, functionalized on the 4 hands with peptide oligomers. I have succesfully generated the .itp file needed, and have run some simulation. The same applies to the peptide. However i run into problems

Re: [gmx-users] dendrimer simulation

Thank you for the fast answer, i will do that then. Do i have to close this thread, or it will fade by itself? Lukacs On 7/24/12 10:14 AM, neme...@pharm.u-szeged.hu wrote: I have to simulate a G0 PAMAM dendrimer, functionalized on the 4 hands with peptide oligomers. I have succesfully

Re: [gmx-users] dendrimer simulation

On 7/24/12 10:39 AM, neme...@pharm.u-szeged.hu wrote: Thank you for the fast answer, i will do that then. Do i have to close this thread, or it will fade by itself? Nothing fades, everything stays archived :) But if the issue is closed, simply stop replying to the thread, and ask any new