Re: [gmx-users] using command g_traj to output the trajectory of an ion in the z direction

2011-05-05 Thread Justin A. Lemkul
toby10222...@sina.com wrote: Hi I am trying to use g_traj to output the trajectory of an ion in the z direction. I used the following command: g_traj_mpi -f cntsol2.trr -s cntsol2.tpr -n cntsol.ndx -z -ox K_nojump.xvg For the option '-z', the manual describes it as 'Plot Z-component'. Howe

[gmx-users] using command g_traj to output the trajectory of an ion in the z direction

2011-05-05 Thread toby10222224
Hi I am trying to use g_traj to output the trajectory of an ion in the z direction. I used the following command: g_traj_mpi -f cntsol2.trr -s cntsol2.tpr -n cntsol.ndx -z -ox K_nojump.xvg For the option '-z', the manual describes it as 'Plot Z-component'. However, I still got the trajectory o