Hi Catherine,
you should install any gromacs *4.5.x*, and then you can use gromacs
with each trajectory supported by VMD because gromacs is able to use VMD plugin
to
perform trajectory reading.
Basically:
1) Install the latest gromacs version
2) Install VMD
3) Set the variable VMD_PLUGIN_PATH to
On 9/03/2012 3:40 AM, a a wrote:
Dear Sir/Madam,
I learnt that we can use mdcrd from AMBER directly.
I have used the following commands.
/share1/gromacs/bin/g_covar -s xxx.pdb -f xxx.mdcrd -o -v
An error message was obtained.
Program g_covar, VERSION 4.0.7
Source code file: gmxfio.c, line:
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