On 11/22/12 2:36 AM, rama david wrote:
Dear user ,
I simulate the two protein in random coil position, when they come close
they form antiparallel beta sheet structure.
I want to calculate the change in hydrophilic and hydrophobic surface
area over my simulation time.
For usig g_sas
Hi justin,
Thank you for reply.
As per your suggestion,
The whole protein should always be the group for the
surface calculation. Whatever subset of those atoms (i.e. residues of
interest) can be the output group.
So as per your suggestion I have to select the protein as my
On 11/22/12 1:54 PM, rama david wrote:
Hi justin,
Thank you for reply.
As per your suggestion,
The whole protein should always be the group for the
surface calculation. Whatever subset of those atoms (i.e. residues of
interest) can be the output group.
So as per your
Thank you justin
With best wishes and regards,
Rama David
On Fri, Nov 23, 2012 at 12:45 AM, Justin Lemkul jalem...@vt.edu wrote:
On 11/22/12 1:54 PM, rama david wrote:
Hi justin,
Thank you for reply.
As per your suggestion,
The whole protein should always be the
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