[gmx-users] genconf command

2012-07-17 Thread cuong nguyen
Dear Gmx-users, I created a box size 4 4 2 and named layer.gro. Then genconf was used to doulble this box: genconf -f layer.gro -o 2layers.gro -nbox 1 1 2 -dist 0 0 8 However, the copied box has the same direction as the original box. Could you please help me to rotate 180 degrees the copied one?

Re: [gmx-users] genconf command

2012-07-17 Thread Mark Abraham
On 17/07/2012 4:32 PM, cuong nguyen wrote: Dear Gmx-users, I created a box size 4 4 2 and named layer.gro. Then genconf was used to doulble this box: genconf -f layer.gro -o 2layers.gro -nbox 1 1 2 -dist 0 0 8 However, the copied box has the same direction as the original box. Could you please

Re: [gmx-users] genconf command

2012-07-17 Thread rama david
Dear cuong nguyen.. I think use following commands. Try editconf -rotate for rotaion angle along axis along these use -center co-ordinate if you want to place canter of box at particular position Try editconf -translate For translation along axis On Tue, Jul 17, 2012 at 2:07 PM, Mark