Re: [gmx-users] my VMD
Hi do the following .. open the trajectory in tthe molecule not as seperate molecule.. As example you havre md.gro and md.xtc files.. file == new molecule load files for md.pdb open it in vmd .. then be sure that load files for : sould have the file name for which you want to see treajectory...here md.gro through browse open the md.xtc then load it.. With best wishes aned regards.. Rama david On Wed, Aug 15, 2012 at 3:27 PM, Acoot Brett acootbr...@yahoo.com wrote: Dear All, I just installed a VMD. And then I load a gro file and a xtc file from a simulation. The bar in the VMD Main window continuously moves, however the protein molecule in the OpenGL Display window does not move. Will you please tell me what is the problem, or how can see the whole simulation? Cheers, Acoot -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
Re: [gmx-users] my VMD
Sorry md.pdb/md.gro On Thu, Aug 16, 2012 at 11:34 AM, rama david ramadavidgr...@gmail.com wrote: Hi do the following .. open the trajectory in tthe molecule not as seperate molecule.. As example you havre md.gro and md.xtc files.. file == new molecule load files for md.pdb open it in vmd .. then be sure that load files for : sould have the file name for which you want to see treajectory...here md.gro through browse open the md.xtc then load it.. With best wishes aned regards.. Rama david On Wed, Aug 15, 2012 at 3:27 PM, Acoot Brett acootbr...@yahoo.com wrote: Dear All, I just installed a VMD. And then I load a gro file and a xtc file from a simulation. The bar in the VMD Main window continuously moves, however the protein molecule in the OpenGL Display window does not move. Will you please tell me what is the problem, or how can see the whole simulation? Cheers, Acoot -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
[gmx-users] my VMD
Dear All, I just installed a VMD. And then I load a gro file and a xtc file from a simulation. The bar in the VMD Main window continuously moves, however the protein molecule in the OpenGL Display window does not move. Will you please tell me what is the problem, or how can see the whole simulation? Cheers, Acoot -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
[gmx-users] my VMD
I suggest that you post this to the VMD users list. -- original message -- Dear All, I just installed a VMD. And then I load a gro file and a xtc file from a simulation. The bar in the VMD Main window continuously moves, however the protein molecule in the OpenGL Display window does not move. Will you please tell me what is the problem, or how can see the whole simulation? Cheers, Acoot -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
