Re: [gmx-users] Question about make_ndx and g_angle

2013-11-08 Thread Riccardo Concu
Dear Changwoon,
why are you using ./make_ndx instead of make_ndx? Did you try to use the
command without ./?
Regards
El jue, 07-11-2013 a las 14:12 -0800, Chang Woon Jang escribió:
 Dear Users, 
 
  I am using openSUSE 12.3 and try to use make_ndx and g_angle. When I try 
 the following command, there is an error message. 
 
  ./make.ndx -f data.pdb
 
 ./make_ndx: error while loading shared libraries: libcudart.so.4:cannot open 
 shared object file: No such file or directory
 
 Do I need cuda library in order to use make_ndx and g_angle ?
 
 Thanks. 
 
 Best regards,
 Changwoon Jang


-- 
gmx-users mailing listgmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists


Re: [gmx-users] Question about make_ndx and g_angle

2013-11-08 Thread Chang Woon Jang
Dear Riccardo Concu, 

  The reason is that I used the make_ndx file in the working directory. 
Now, I solved that problem with installing gromacs as following  

cmake .. -DGMX_BUILD_OWN_FFTW=Off
Anyway, I appreciate your comment.

Best regards,
Changwoon Jang





On Friday, November 8, 2013 3:31 AM, Riccardo Concu ric.co...@gmail.com wrote:
 
Dear Changwoon,
why are you using ./make_ndx instead of make_ndx? Did you try to use the
command without ./?
Regards

El jue, 07-11-2013 a las 14:12 -0800, Chang Woon Jang escribió:
 Dear Users, 
 
      I am using openSUSE 12.3 and try to use make_ndx and g_angle. When I try 
the following command, there is an error message. 
 
  ./make.ndx -f data.pdb
 
 ./make_ndx: error while loading shared libraries: libcudart.so.4:cannot open 
 shared object file: No such file or directory
 
 Do I need cuda library in order to use make_ndx and g_angle ?
 
 Thanks. 
 
 Best regards,
 Changwoon Jang


-- 
gmx-users mailing list    gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
--
gmx-users mailing listgmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists


[gmx-users] Question about make_ndx and g_angle

2013-11-07 Thread Chang Woon Jang
Dear Users, 

 I am using openSUSE 12.3 and try to use make_ndx and g_angle. When I try 
the following command, there is an error message. 

 ./make.ndx -f data.pdb

./make_ndx: error while loading shared libraries: libcudart.so.4:cannot open 
shared object file: No such file or directory

Do I need cuda library in order to use make_ndx and g_angle ?

Thanks. 

Best regards,
Changwoon Jang
--
gmx-users mailing listgmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists