Re: [gmx-users] xvg plotting
Hi there, in gnuplot you can do: gnuplotset datafile commentschars #% gnuplotfile(i) = sprintf(fio%d.xvg,i) gnuplotplot for[i=1:6] file(i) u 1:2 w lp in order to plot fio1.xvg fio2.xvg fio3.xvg fio4.xvg fio5.xvg fio6.xvg hope it helps and On 06/22/2011 01:38 AM, Dallas Warren wrote: Any graphing program will do, the .xvg file is a text data file, so you can import it into Excel, Sigma Plot, xmgrace, gnuplot etc. Catch ya, Dr. Dallas Warren Medicinal Chemistry and Drug Action Monash Institute of Pharmaceutical Sciences, Monash University 381 Royal Parade, Parkville VIC 3010 dallas.war...@monash.edu +61 3 9903 9304 - When the only tool you own is a hammer, every problem begins to resemble a nail. *From:*gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] *On Behalf Of *Nicole Varvarigou *Sent:* Tuesday, 21 June 2011 7:40 PM *To:* gmx-users@gromacs.org *Subject:* [gmx-users] xvg plotting Hi, I am a new user in gromacs and i would like to create a plot from several .xvg files. Can anyone guide me through the process? Thank you in advance N.V. -- - Andrea Spitaleri PhD Dulbecco Telethon Institute c/o Raffaele Scientific Institute Biomolecular NMR Laboratory Dibit2 Basilica 3A2 Via Olgettina 58 20132 Milano Italy Tel: 0039-0226434348 Fax: 0039-0226434153 http://sites.google.com/site/andreaspitaleri/ http://www.linkedin.com/in/andreaspitaleri - - Dai il tuo 5XMILLE al San Raffaele. Basta una firma. Se firmi per la ricerca sanitaria del San Raffaele di Milano, firmi per tutti. C.F. 03 06 42 80 153. INFO: 5xmi...@hsr.it - www.5xmille.org -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
[gmx-users] xvg plotting
Hi, I am a new user in gromacs and i would like to create a plot from several .xvg files. Can anyone guide me through the process? Thank you in advance N.V. -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
Re: [gmx-users] xvg plotting
On 21/06/2011 7:40 PM, Nicole Varvarigou wrote: Hi, I am a new user in gromacs and i would like to create a plot from several .xvg files. Can anyone guide me through the process? That's not really the purpose of this list, which is for GROMACS-related questions. I can suggest that you look for tutorial material on your plotting tool of choice (e.g. grace, gnuplot), which should take you most of the way towards such a solution. Mark -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
[gmx-users] xvg plotting
Hi Nicole In linux/unix, there are a program named xmgr aor xmgrace by default. Just you type in command line : xmgr 1.xvg 2.xvg 3.xvg .. -- Leila Karami Ph.D. student of Physical Chemistry K.N. Toosi University of Technology Theoretical Physical Chemistry Group -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
RE: [gmx-users] xvg plotting
Any graphing program will do, the .xvg file is a text data file, so you can import it into Excel, Sigma Plot, xmgrace, gnuplot etc. Catch ya, Dr. Dallas Warren Medicinal Chemistry and Drug Action Monash Institute of Pharmaceutical Sciences, Monash University 381 Royal Parade, Parkville VIC 3010 dallas.war...@monash.edu +61 3 9903 9304 - When the only tool you own is a hammer, every problem begins to resemble a nail. From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] On Behalf Of Nicole Varvarigou Sent: Tuesday, 21 June 2011 7:40 PM To: gmx-users@gromacs.org Subject: [gmx-users] xvg plotting Hi, I am a new user in gromacs and i would like to create a plot from several .xvg files. Can anyone guide me through the process? Thank you in advance N.V. -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
