Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

For technical reasons, parallel make with GMX_BUILD_OWN_FFTW can have this problem. Run make a second time and it will work. Mark On Wed, Sep 11, 2013 at 6:22 AM, shahid nayeem msnay...@gmail.com wrote: Thanks Wahab I followed your instruction and added #define HAVE_SYS_TIME_H at the very

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

Thanks. But when I ran make again I am getting this error [ 0%] Built target gmxfftw make[2]: *** No rule to make target `//cygdrive/c/packages/gromacs-4.6.3/build/src/contrib/fftw/gmxfftw-prefix/lib/libfftw3.a', needed by `src/gmxlib/cyggmx_d-8.dll'. Stop. CMakeFiles/Makefile2:1238: recipe for

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

Thanks Mark $ make [ 0%] Built target gmxfftw make[2]: *** No rule to make target `//cygdrive/c/packages/gromacs-4.6.3/build/src/contrib/fftw/gmxfftw-prefix/lib/libfftw3.a', needed by `src/gmxlib/cyggmx_d-8.dll'. Stop. CMakeFiles/Makefile2:1238: recipe for target

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

Don't know, sorry. None of the devs use Cygwin. I suggest you follow the normal instructions to install FFTW manually, and then direct CMake to use it. Mark On Wed, Sep 11, 2013 at 9:38 AM, shahid nayeem msnay...@gmail.com wrote: Thanks Mark $ make [ 0%] Built target gmxfftw make[2]: ***

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

On 11.09.2013 09:38, shahid nayeem wrote: I checked in folder /cygdrive/c/packages/gromacs-4.6.3/build/src/contrib/fftw/gmxfftw-prefix/lib/libfftw3.a , this file exists but perhaps `src/gmxlib/cyggmx_d-8.dll' is not able to locate it. Did you 'cmake' with -DGMX_PREFER_STATIC_LIBS=ON ? BTW,

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

On Wed, Sep 11, 2013 at 12:04 PM, Mirco Wahab mirco.wa...@chemie.tu-freiberg.de wrote: On 11.09.2013 09:38, shahid nayeem wrote: I checked in folder /cygdrive/c/packages/gromacs-4.6.3/build/src/contrib/fftw/gmxfftw-prefix/lib/libfftw3.a , this file exists but perhaps

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

On 10.09.2013 08:20, shahid nayeem wrote: I am installing gromacs -4.6.3 on cygwin with following commands tar -xvzf gramcs-4.6.3.tar.gz cd gromacs-4.6.3 mkdir build cd build cmake .. -DGMX_BUILD_OWN_FFTW=ON -DGMX_DOUBLE=on It runs fine and write file in build directory. when I run make

Re: [gmx-users] Fwd: installing Gromacs4.6.3 on cygwin

Thanks Wahab I followed your instruction and added #define HAVE_SYS_TIME_H at the very top of the file gmxlib/thread_mpi/impl.h. Then again in make command I got following errors. [ 53%] Building C object