What else for tomorrow?
Marshfield is scheduled to scribe.
https://docs.google.com/document/d/1N3Z0coOHGrc1mXDodKpEWSzycBgtwxSuBiTlcznnrVs/edit
current agenda snapshot:
1. Convene, take roll, review records and plan the next meeting(s).
* 11:00 a.m. Central Time.
Meeting ID and access code:
817-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1
(571) 317-3131
* Roll; Reminder - put site after your name in
GoToMeeting<https://global.gotomeeting.com/meeting/join/817393381> preferences
GPC DevTeams<https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeams>
represented? KUMC (chair), UIOWA, MCW, MCRI (scribe), UNMC, UTHSCSA, UTSW, MU,
IndianaU, Utah, Allina, Intermountain, UTH
* Comments on the agenda? (ref
SoftwareDev#tracking<https://informatics.gpcnetwork.org/trac/Project/wiki/SoftwareDev#tracking>)
On last week’s
763notes?<https://docs.google.com/document/d/1N3Z0coOHGrc1mXDodKpEWSzycBgtwxSuBiTlcznnrVs/edit#heading=h.9ioc8gnd1ijp>
(#12<https://informatics.gpcnetwork.org/trac/Project/ticket/12>)
Recent tickets
opened/closed<https://informatics.gpcnetwork.org/trac/Project/timeline> - FYI
(i.e. not intended for discussion)
* None; one new ticket is under next-d below
* Next meeting(s): Sep 22; scribe: MCW? Allina?
* Note scribe
rotation<https://docs.google.com/document/d/1fPoDn0pdVvC-Mct58X7wkGD2rNiId8aNZ9JG_WCbcf4/edit#heading=h.zbjzupqx0rh7>
appendix
* FW: Sentinel next steps in PCORnet
<http://listserv.kumc.edu/pipermail/gpc-dev/2020q3/011005.html> Russ Waitman
Jul 1
Dan/KUMC to get more info about volume / quality issues where the line was
divided (not immediately)
2. 2020 Data Curation Queries from DRNOC Forum July 2020
<https://pcornet.imeetcentral.com/drnoc-workgroups/folder/WzIwLDEyOTgxNzU1XQ/WzIsNzEzMTYxNjld/>Cycle
8, Third Refresh DC
v5.13<https://pcornet.imeetcentral.com/drnoc-workgroups/folder/WzIwLDEyOTU2NTQ5XQ>?
5 Oct distribution; 26 Oct results due
* Follow up on the Data WG Meeting 7/17
<http://listserv.kumc.edu/pipermail/gpc-dev/2020q3/011068.html> “Is there any
interest to characterize more lab results data to see how well the ABN_IND
performs to fill gaps where there are not normal ranges?” S. Rea and/or S.
Roush to coordinate with DRN OC; Sep 14 forum?
3. #411<https://informatics.gpcnetwork.org/trac/Project/ticket/411> Nebraska
lexicon update: Release notes still show 20170331. News since gpc-dev meetings
in April 2020?
4.
Milestone:next-d<https://informatics.gpcnetwork.org/trac/Project/milestone/next-d>
* #763 NEXTD: FACILITY_TYPE & PROVIDER_SPECIALTY
<https://informatics.gpcnetwork.org/trac/Project/ticket/763>Goal is to ensure
the Oct refresh has this issue addressed and then submit to NEXT-D out of the
approved Oct refresh.
* UTSW - Easier to submit NPIs
* MCW - generated mapping between dept id (internal to MCW) and fac
type (the latter is PCORnet generated).
* KUMC - DC to report more on KUMC’s efforts next week. done:
* “current approach only populated 20% Need to do more
investigation.” -- XS 12
Sep<https://informatics.gpcnetwork.org/trac/Project/ticket/763#comment:6>
* UNMC - JRC will investigate into facility type issue
* IU - Dan Hood will check with analyst on status
* UIOWA - Mark C to check into facility type
* #764 (DM medications 4 DM patients) created by A'lona
Furmanchuck<https://informatics.gpcnetwork.org/trac/Project/ticket/764>
* Alona to review diabetic med code lists from Jim C @ UNMC via DC.
done.
* Iowa -
* Indiana -
* UNMC -
5.
Milestone:covid19wk<https://informatics.gpcnetwork.org/trac/Project/milestone/covid19wk>
* #759<https://informatics.gpcnetwork.org/trac/Project/ticket/759>
covid19 PCORNet
datamarts<https://informatics.gpcnetwork.org/trac/Project/ticket/759>: PHII
(contracting group for CDC) is waiting for their award. ~3 weeks?
6.
Milestone:tumor-reg-18<https://informatics.gpcnetwork.org/trac/Project/milestone/tumor-reg-18>
* #749<https://informatics.gpcnetwork.org/trac/Project/ticket/749>
PCORNet style TUMOR
table<https://informatics.gpcnetwork.org/trac/Project/ticket/749> -
kumc-bmi/naaccr-tumor-data
<https://github.com/kumc-bmi/naaccr-tumor-data>#760<https://informatics.gpcnetwork.org/trac/Project/ticket/760>
duplicates in tumor table: collect data from
sites<https://informatics.gpcnetwork.org/trac/Project/ticket/760> - DROC
Request
#82<https://redcap.kumc.edu/redcap_v9.5.25/DataEntry/index.php?pid=16659&id=82&event_id=44812&page=gpc_droc_oversight_request>
- SAS code for DROC #82
<http://listserv.kumc.edu/pipermail/gpc-dev/2020q3/011046.html>Build a TUMOR
table, run SAS code and return results to
https://redcap.kumc.edu/surveys/?s=PC3Y8DXNTH
any technique to get it into the form specified in tumor
table.version1.2.xlsx<https://github.com/kumc-bmi/naaccr-tumor-data/blob/master/src/test/resources/gpc/unit/tumor%20table.version1.2.xlsx>
is sufficient.
* Submitted: UIOWA, UTHSCSA, MCW
* (UNMC, Utah, Allina, Intermountain not expected to participate for
reasons given in earlier meetings.)
* KUMC - DC: not sure whether we submitted
* MCRF - In progress, ETA in the next 1-2 weeks (22 Sep)
* Indiana - Jeff ETA mid Sept - Tony F.
* UTSW - PR: Changed update to merge; ready to submit in the next few
days (after 8 Sep)
* MU - Dan C to follow up on sharing MCW’s code via KUMC REDCap
DC:
7.
DeathDataSharing<https://informatics.gpcnetwork.org/trac/Project/wiki/DeathDataSharing>
- license / justification
DC: UIOWA asked Dec
2019<https://informatics.gpcnetwork.org/trac/Project/ticket/688#comment:18> -
answer was private communication from RW.
DC to follow up with Deandra - in progress; intermediate results sent.
* ~2 months (from Sep 14)
* Else renewal is up Oct / Nov 2021
wash your hands
…<https://www.cdc.gov/coronavirus/2019-ncov/prepare/prevention.html> wear a
mask and social distance
--
Dan
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