Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-03 Thread Tiago de Paula Peixoto
On 03.03.2017 12:38, P-M wrote: > This now compiles and works on one of my machines. My other machine now > complains about libicudata.so.56: > > Traceback (most recent call last): > File "", line 1, in > File > "/home/pmj27/anaconda2/lib/python2.7/site-packages/graph_tool/__init__.py", >

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-03 Thread P-M
This now compiles and works on one of my machines. My other machine now complains about libicudata.so.56: Traceback (most recent call last): File "", line 1, in File "/home/pmj27/anaconda2/lib/python2.7/site-packages/graph_tool/__init__.py", line 111, in dl_import("from . import

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-02 Thread P-M
Similar error on a different sysyem. I ran ./configure CXXFLAGS="-std=gnu++14 -Wno-unused-local-typedefs" PYTHON="/home/pmj27/anaconda2/bin/python2.7" CAIROMM_LIBS="-L/home/pmj27/anaconda2/include/cairomm-1.0/cairomm" --enable-openmp --with-boost=/home/pmj27/anaconda2 so didn't have any CPPFLAGS

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-02 Thread P-M
It seems to still fail I fear. The screen output is huge but in the attached file ( screengrab1.zip ) you seem to be able to find the relevant error between lines 6824 and 7952. -- View

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-02 Thread P-M
Great, thanks! Here is the output of "make V=1 2>&1 | tee ./screengrab.dat" rerunning it after the error had occured ( screengrab.dat ). If you would like the output for an entirely new

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-02 Thread Tiago de Paula Peixoto
On 02.03.2017 16:21, P-M wrote: > That is strange indeed. I have downgraded to the anaconda version of boost > (v1.60) and boost-python (v1.60) by sseefeld. The configure commands are > unchanged as ./configure --prefix=$HOME/.local > --with-boost=/home/pmj27/anaconda2 CXX="g++-5"

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-02 Thread Tiago de Paula Peixoto
On 02.03.2017 16:21, P-M wrote: > That is strange indeed. I have downgraded to the anaconda version of boost > (v1.60) and boost-python (v1.60) by sseefeld. The configure commands are > unchanged as ./configure --prefix=$HOME/.local > --with-boost=/home/pmj27/anaconda2 CXX="g++-5"

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-01 Thread Tiago de Paula Peixoto
On 01.03.2017 18:21, P-M wrote: > `conda list` returns `boost 1.63.0 > np112py27_6conda-forge`. That should be about as up-to-date as it gets. This is strange. I have the same version, and I cannot reproduce the error. -- Tiago de Paula Peixoto

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-03-01 Thread Tiago de Paula Peixoto
On 01.03.2017 16:20, P-M wrote: > Does anybody know what this is caused by/how I could solve it? Which boost version do you have installed? -- Tiago de Paula Peixoto signature.asc Description: OpenPGP digital signature ___

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-28 Thread P-M
I have updated cgal to 4.7 so that now works and after applying the libreadline workaround it compiles and installs but I still get C++ signature mismatches. I have ripped off Anaconda entirely, re-installed it, installed the latest Boost in it using only one source to make sure all packages are

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread Tiago de Paula Peixoto
On 24.02.2017 17:15, P-M wrote: > I have noticed that too. Does the output of `make` get routed to a file like > it does for config.log? Or would I need to use console redirection? You need to redirect. > The system cgal seems to be version 4.7-4. The conda version is cgal 4.5 by > ostrokach

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread P-M
I have noticed that too. Does the output of `make` get routed to a file like it does for config.log? Or would I need to use console redirection? The system cgal seems to be version 4.7-4. The conda version is cgal 4.5 by ostrokach -- View this message in context:

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread P-M
Applying the work around and using the system readline means ./configure now seems to run without errors. When running make I get an error however revolving around CGAL. Do you know what might be causing them? In file included from

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread Tiago de Paula Peixoto
On 24.02.2017 16:11, P-M wrote: > That resolved the numpy issue. Now I get another error message though: > > configure: creating ./config.status > config.status: creating Makefile > gawk: symbol lookup error: /home/pmj27/anaconda2/lib/libreadline.so.6: > undefined symbol: PC > config.status:

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread P-M
That resolved the numpy issue. Now I get another error message though: configure: creating ./config.status config.status: creating Makefile gawk: symbol lookup error: /home/pmj27/anaconda2/lib/libreadline.so.6: undefined symbol: PC config.status: error: could not create Makefile I have attached

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-24 Thread Tiago de Paula Peixoto
On 24.02.2017 12:17, P-M wrote: > I am getting that impression too. Unfortunately the newest git verison > produces the same error as far as I can tell. config.log > > > is attached again.

Re: [graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-23 Thread P-M
The odd thing though is that graph-tool is compiled against /home/pmj27/anaconda2/bin/python2.7. The anaconda boost is installed through conda so should also be linked against that. I can try and tell configure explicitely to take its boost libraries from /home/pmj27/anaconda2/lib/. As far as I

[graph-tool] Boost.Python.ArgumentError: Python argument types did not match C++ signature

2017-02-22 Thread P-M
I have been trying to compile the recent git version of graph-tool against my anaconda python. I do this using sudo ./configure CXX="g++-5" CXXFLAGS="-std=gnu++14 -Wno-unused-local-typedefs" PYTHON="/home/pmj27/anaconda2/bin/python2.7"