Re: [graph-tool] RedHat Installation Assistance

On 05.12.2016 17:58, bloodymeli wrote: > Thanks! I'll ask the manager to update the numpy installation. However, he > might be reluctant to do so due to breaking other dependencies. I guess this > is the reason he tried to link with the local numpy-1.8.1-2. It's there a > way to link/compile with

[graph-tool] Way to get vertex ids that belong to a group

After running an inference method such as: graph_tool.inference.minimize_blockmodel_dl() I get back a graph_tool.inference.BlockState, which provides a PropertyMap on the vertices which i can use to tell which group a vertex is in. However, if i need to find out all the other members of the same

Re: [graph-tool] RedHat Installation Assistance

On 05.12.2016 08:08, bloodymeli wrote: > I have requested out IT manager to install graph-tool on our local cluster > (based on RedHat). > He changed the "configure" link to point to the corresponding directories, > and the "configure" operation seemed to completed successfully. > However, the

Re: [graph-tool] RedHat Installation Assistance

Thanks. I'm attaching the corresponding information and filed I have received from out IT manager. The system info is : # uname -a Linux admin 2.6.32-431.5.1.el6.x86_64 #1 SMP Fri Jan 10 14:46:43 EST 2014 x86_64 x86_64 x86_64 GNU/Linux # cat /etc/issue Red Hat Enterprise Linux Server release

Re: [graph-tool] RedHat Installation Assistance

Hi, Here's the IT manager response : Via the RedHat rpm - numpy-1.4.1-9 is installed. Also under the local installation of python2.7, numpy-1.8.1-2 is installed. Regarding folders : /usr/lib64/python2.6/site-packages/numpy /usr/local/epd/lib/python2.7/site-packages/numpy Once again, thanks

Re: [graph-tool] RedHat Installation Assistance

On 05.12.2016 16:16, bloodymeli wrote: > Via the RedHat rpm - numpy-1.4.1-9 is installed. This is the problem. graph-tool requires numpy version 1.7 or above. Numpy 1.4 is already over 6 years old. -- Tiago de Paula Peixoto ___

Re: [graph-tool] RedHat Installation Assistance

Thanks! I'll ask the manager to update the numpy installation. However, he might be reluctant to do so due to breaking other dependencies. I guess this is the reason he tried to link with the local numpy-1.8.1-2. It's there a way to link/compile with the epd copy ( at